Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1278 and Dshi_1279 are separated by 11 nucleotides Dshi_1279 and Dshi_1280 are separated by 16 nucleotides
Dshi_1278: Dshi_1278 - Phytanoyl-CoA dioxygenase (RefSeq), at 1,327,313 to 1,328,482
_1278
Dshi_1279: Dshi_1279 - Myo-inositol catabolism IolB domain protein (RefSeq), at 1,328,494 to 1,329,306
_1279
Dshi_1280: Dshi_1280 - aminotransferase class V (RefSeq), at 1,329,323 to 1,330,588
_1280
Position (kb)
1328
1329
1330 Strain fitness (log2 ratio)
-1
0
1 at 1327.537 kb on + strand, within Dshi_1278 at 1327.539 kb on + strand, within Dshi_1278 at 1327.547 kb on - strand, within Dshi_1278 at 1327.565 kb on + strand, within Dshi_1278 at 1327.644 kb on - strand, within Dshi_1278 at 1327.768 kb on + strand, within Dshi_1278 at 1327.827 kb on + strand, within Dshi_1278 at 1327.930 kb on - strand, within Dshi_1278 at 1327.961 kb on + strand, within Dshi_1278 at 1328.057 kb on - strand, within Dshi_1278 at 1328.059 kb on - strand, within Dshi_1278 at 1328.425 kb on + strand at 1328.515 kb on + strand at 1328.573 kb on + strand at 1328.630 kb on - strand, within Dshi_1279 at 1328.664 kb on - strand, within Dshi_1279 at 1328.715 kb on - strand, within Dshi_1279 at 1328.855 kb on + strand, within Dshi_1279 at 1328.965 kb on + strand, within Dshi_1279 at 1329.000 kb on - strand, within Dshi_1279 at 1329.021 kb on - strand, within Dshi_1279 at 1329.107 kb on - strand, within Dshi_1279 at 1329.157 kb on - strand, within Dshi_1279 at 1329.180 kb on + strand, within Dshi_1279 at 1329.330 kb on - strand at 1329.440 kb on + strand at 1329.616 kb on + strand, within Dshi_1280 at 1329.753 kb on - strand, within Dshi_1280 at 1329.763 kb on + strand, within Dshi_1280 at 1329.885 kb on + strand, within Dshi_1280 at 1329.961 kb on + strand, within Dshi_1280 at 1330.173 kb on - strand, within Dshi_1280 at 1330.238 kb on + strand, within Dshi_1280 at 1330.252 kb on + strand, within Dshi_1280 at 1330.258 kb on - strand, within Dshi_1280 at 1330.260 kb on - strand, within Dshi_1280
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,327,537 + Dshi_1278 0.19 +0.8 1,327,539 + Dshi_1278 0.19 +1.6 1,327,547 - Dshi_1278 0.20 +0.2 1,327,565 + Dshi_1278 0.22 +0.7 1,327,644 - Dshi_1278 0.28 -0.3 1,327,768 + Dshi_1278 0.39 +0.8 1,327,827 + Dshi_1278 0.44 +0.3 1,327,930 - Dshi_1278 0.53 -0.3 1,327,961 + Dshi_1278 0.55 +0.0 1,328,057 - Dshi_1278 0.64 -0.6 1,328,059 - Dshi_1278 0.64 +0.0 1,328,425 + +0.1 1,328,515 + -0.3 1,328,573 + -0.7 1,328,630 - Dshi_1279 0.17 +0.0 1,328,664 - Dshi_1279 0.21 +0.1 1,328,715 - Dshi_1279 0.27 -0.7 1,328,855 + Dshi_1279 0.44 +0.4 1,328,965 + Dshi_1279 0.58 -0.8 1,329,000 - Dshi_1279 0.62 -0.6 1,329,021 - Dshi_1279 0.65 -0.4 1,329,107 - Dshi_1279 0.75 -0.2 1,329,157 - Dshi_1279 0.82 +0.0 1,329,180 + Dshi_1279 0.84 +0.0 1,329,330 - -0.8 1,329,440 + -0.7 1,329,616 + Dshi_1280 0.23 -0.1 1,329,753 - Dshi_1280 0.34 +0.5 1,329,763 + Dshi_1280 0.35 -0.8 1,329,885 + Dshi_1280 0.44 -0.5 1,329,961 + Dshi_1280 0.50 -0.6 1,330,173 - Dshi_1280 0.67 -0.3 1,330,238 + Dshi_1280 0.72 -0.7 1,330,252 + Dshi_1280 0.73 -0.6 1,330,258 - Dshi_1280 0.74 +0.0 1,330,260 - Dshi_1280 0.74 -0.4
Or see this region's nucleotide sequence