Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0492 and Dshi_0493 overlap by 4 nucleotides Dshi_0493 and Dshi_0494 overlap by 4 nucleotides Dshi_0494 and Dshi_0495 are separated by 58 nucleotides Dshi_0495 and Dshi_0496 are separated by 206 nucleotides
Dshi_0492: Dshi_0492 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 477,181 to 478,005
_0492
Dshi_0493: Dshi_0493 - ABC transporter related (RefSeq), at 478,002 to 478,751
_0493
Dshi_0494: Dshi_0494 - NnrS family protein (RefSeq), at 478,748 to 480,028
_0494
Dshi_0495: Dshi_0495 - hypothetical protein (RefSeq), at 480,087 to 480,497
_0495
Dshi_0496: Dshi_0496 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 480,704 to 482,722
_0496
Position (kb) 478
479
480
481 Strain fitness (log2 ratio) -2
-1
0
1
2 at 477.766 kb on + strand, within Dshi_0492 at 477.785 kb on + strand, within Dshi_0492 at 477.888 kb on - strand, within Dshi_0492 at 477.888 kb on - strand, within Dshi_0492 at 477.900 kb on - strand, within Dshi_0492 at 477.907 kb on + strand, within Dshi_0492 at 477.910 kb on + strand, within Dshi_0492 at 477.936 kb on + strand at 477.944 kb on - strand at 477.979 kb on + strand at 477.979 kb on + strand at 477.979 kb on + strand at 477.987 kb on - strand at 477.987 kb on - strand at 478.016 kb on + strand at 478.019 kb on + strand at 478.045 kb on + strand at 478.046 kb on - strand at 478.103 kb on + strand, within Dshi_0493 at 478.111 kb on - strand, within Dshi_0493 at 478.163 kb on + strand, within Dshi_0493 at 478.171 kb on - strand, within Dshi_0493 at 478.171 kb on - strand, within Dshi_0493 at 478.240 kb on - strand, within Dshi_0493 at 478.283 kb on + strand, within Dshi_0493 at 478.376 kb on + strand, within Dshi_0493 at 478.538 kb on + strand, within Dshi_0493 at 478.538 kb on + strand, within Dshi_0493 at 478.546 kb on + strand, within Dshi_0493 at 478.546 kb on - strand, within Dshi_0493 at 478.554 kb on - strand, within Dshi_0493 at 478.554 kb on - strand, within Dshi_0493 at 478.652 kb on - strand, within Dshi_0493 at 478.668 kb on + strand, within Dshi_0493 at 478.676 kb on - strand, within Dshi_0493 at 478.679 kb on + strand at 478.679 kb on + strand at 478.726 kb on - strand at 478.726 kb on - strand at 478.755 kb on - strand at 478.859 kb on + strand at 479.059 kb on + strand, within Dshi_0494 at 479.059 kb on + strand, within Dshi_0494 at 479.067 kb on - strand, within Dshi_0494 at 479.079 kb on + strand, within Dshi_0494 at 479.244 kb on - strand, within Dshi_0494 at 479.244 kb on - strand, within Dshi_0494 at 479.326 kb on - strand, within Dshi_0494 at 479.337 kb on + strand, within Dshi_0494 at 479.414 kb on + strand, within Dshi_0494 at 479.468 kb on + strand, within Dshi_0494 at 479.492 kb on + strand, within Dshi_0494 at 479.500 kb on - strand, within Dshi_0494 at 479.500 kb on - strand, within Dshi_0494 at 479.526 kb on + strand, within Dshi_0494 at 479.624 kb on - strand, within Dshi_0494 at 479.651 kb on + strand, within Dshi_0494 at 479.668 kb on + strand, within Dshi_0494 at 479.714 kb on - strand, within Dshi_0494 at 479.723 kb on + strand, within Dshi_0494 at 479.853 kb on + strand, within Dshi_0494 at 479.932 kb on + strand at 479.947 kb on + strand at 479.987 kb on - strand at 480.109 kb on - strand at 480.139 kb on + strand, within Dshi_0495 at 480.216 kb on + strand, within Dshi_0495 at 480.264 kb on + strand, within Dshi_0495 at 480.336 kb on + strand, within Dshi_0495 at 480.393 kb on + strand, within Dshi_0495 at 480.393 kb on + strand, within Dshi_0495 at 480.451 kb on + strand, within Dshi_0495 at 480.456 kb on + strand, within Dshi_0495 at 480.478 kb on + strand at 480.478 kb on - strand at 480.486 kb on - strand at 480.497 kb on + strand at 480.497 kb on + strand at 480.531 kb on + strand at 480.626 kb on - strand at 480.658 kb on + strand at 480.660 kb on + strand at 480.668 kb on + strand at 480.668 kb on - strand at 480.676 kb on - strand at 480.676 kb on - strand at 480.676 kb on - strand at 480.689 kb on - strand at 480.697 kb on - strand at 480.720 kb on - strand at 480.773 kb on + strand at 480.829 kb on - strand at 480.836 kb on - strand at 480.863 kb on + strand at 480.888 kb on - strand at 480.888 kb on - strand at 480.892 kb on - strand at 480.920 kb on + strand, within Dshi_0496 at 480.988 kb on - strand, within Dshi_0496
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 477,766 + Dshi_0492 0.71 -0.7 477,785 + Dshi_0492 0.73 +0.5 477,888 - Dshi_0492 0.86 -0.6 477,888 - Dshi_0492 0.86 +0.6 477,900 - Dshi_0492 0.87 -2.5 477,907 + Dshi_0492 0.88 +0.2 477,910 + Dshi_0492 0.88 +0.7 477,936 + -0.9 477,944 - -0.7 477,979 + -1.9 477,979 + +1.2 477,979 + +2.4 477,987 - -0.3 477,987 - -0.1 478,016 + +0.3 478,019 + -0.3 478,045 + +0.7 478,046 - +0.1 478,103 + Dshi_0493 0.13 -0.2 478,111 - Dshi_0493 0.15 +0.4 478,163 + Dshi_0493 0.21 +0.1 478,171 - Dshi_0493 0.23 -0.9 478,171 - Dshi_0493 0.23 +0.1 478,240 - Dshi_0493 0.32 -0.1 478,283 + Dshi_0493 0.37 +0.6 478,376 + Dshi_0493 0.50 +0.7 478,538 + Dshi_0493 0.71 -0.0 478,538 + Dshi_0493 0.71 -0.1 478,546 + Dshi_0493 0.73 -0.7 478,546 - Dshi_0493 0.73 +0.1 478,554 - Dshi_0493 0.74 -0.3 478,554 - Dshi_0493 0.74 -0.5 478,652 - Dshi_0493 0.87 +0.1 478,668 + Dshi_0493 0.89 -0.9 478,676 - Dshi_0493 0.90 -0.1 478,679 + +0.1 478,679 + +1.1 478,726 - +0.9 478,726 - -0.3 478,755 - -0.5 478,859 + -0.2 479,059 + Dshi_0494 0.24 +0.1 479,059 + Dshi_0494 0.24 -1.7 479,067 - Dshi_0494 0.25 -0.4 479,079 + Dshi_0494 0.26 -1.5 479,244 - Dshi_0494 0.39 -0.1 479,244 - Dshi_0494 0.39 +0.4 479,326 - Dshi_0494 0.45 +0.8 479,337 + Dshi_0494 0.46 +0.3 479,414 + Dshi_0494 0.52 -0.2 479,468 + Dshi_0494 0.56 -1.2 479,492 + Dshi_0494 0.58 +0.3 479,500 - Dshi_0494 0.59 +0.1 479,500 - Dshi_0494 0.59 -0.6 479,526 + Dshi_0494 0.61 -0.5 479,624 - Dshi_0494 0.68 -0.9 479,651 + Dshi_0494 0.70 +0.1 479,668 + Dshi_0494 0.72 -0.9 479,714 - Dshi_0494 0.75 -0.7 479,723 + Dshi_0494 0.76 -0.1 479,853 + Dshi_0494 0.86 -0.2 479,932 + +0.0 479,947 + -0.3 479,987 - -0.2 480,109 - -1.3 480,139 + Dshi_0495 0.13 -0.3 480,216 + Dshi_0495 0.31 -1.5 480,264 + Dshi_0495 0.43 -0.6 480,336 + Dshi_0495 0.61 -1.5 480,393 + Dshi_0495 0.74 -1.1 480,393 + Dshi_0495 0.74 -0.7 480,451 + Dshi_0495 0.89 -1.3 480,456 + Dshi_0495 0.90 +1.4 480,478 + -0.2 480,478 - +0.5 480,486 - +1.1 480,497 + +0.3 480,497 + -0.3 480,531 + -1.5 480,626 - +0.4 480,658 + +0.6 480,660 + +0.7 480,668 + +0.5 480,668 - +0.1 480,676 - -0.7 480,676 - -0.9 480,676 - +0.9 480,689 - -0.2 480,697 - +0.4 480,720 - -1.3 480,773 + -0.9 480,829 - +0.7 480,836 - +1.1 480,863 + -0.5 480,888 - -1.9 480,888 - +0.7 480,892 - -0.7 480,920 + Dshi_0496 0.11 -0.0 480,988 - Dshi_0496 0.14 +0.1
Or see this region's nucleotide sequence