Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5072

Experiment: KB with Flavone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Flavone 0.125 mg/ml
6,015,523	+		Psyr_5070	0.62	-1.2
6,015,523	+		Psyr_5070	0.62	-0.2
6,015,523	+		Psyr_5070	0.62	-0.3
6,015,524	-				+0.8
6,015,524	-		Psyr_5070	0.62	+1.6
6,015,709	+		Psyr_5070	0.83	-2.1
6,015,709	+		Psyr_5070	0.83	+0.3
6,015,709	+		Psyr_5070	0.83	+0.3
6,015,709	+		Psyr_5070	0.83	+0.6
6,015,710	-		Psyr_5070	0.83	+1.1
6,015,710	-		Psyr_5070	0.83	+0.7
6,015,710	-		Psyr_5070	0.83	+1.0
6,015,710	-		Psyr_5070	0.83	-1.1
6,015,710	-		Psyr_5070	0.83	+0.3
6,015,710	-		Psyr_5070	0.83	+1.5
6,015,710	-		Psyr_5070	0.83	-0.5
6,015,710	-		Psyr_5070	0.83	+0.8
6,015,710	-		Psyr_5070	0.83	+0.4
6,015,710	-		Psyr_5070	0.83	+0.5
6,015,765	-		Psyr_5070	0.90	+0.8
6,015,845	+				-0.3
6,015,845	+				+0.2
6,015,845	+				+1.2
6,015,845	+				+0.6
6,015,846	-				-1.1
6,015,846	-				+1.0
6,015,846	-				+0.4
6,015,846	-				+0.1
6,015,899	+				-0.3
6,015,899	+				-0.3
6,015,899	+				-0.7
6,015,899	+				+0.5
6,015,899	+				-0.0
6,015,900	-				+2.8
6,015,900	-				-0.8
6,015,900	-				+1.2
6,015,900	-				+1.8
6,015,900	-				+1.9
6,015,900	-				-0.2
6,015,900	-				-1.1
6,015,900	-				+1.2
6,015,900	-				+0.2
6,015,901	+				+0.4
6,015,901	+				+0.1
6,015,902	-				-1.8
6,015,902	-				+0.0
6,015,902	-				+0.1
6,015,902	-				+1.8
6,015,902	-				+0.2
6,015,902	-				+0.6
6,015,902	-				+0.7
6,015,902	-				-1.1
6,015,913	+				+3.1
6,015,914	-				+2.6
6,015,921	+				-0.3
6,015,921	+				+0.3
6,015,921	+				+2.0
6,015,922	-				-0.9
6,015,922	-				+0.4
6,015,922	-				+0.2
6,015,939	+				-0.7
6,015,939	+				-0.3
6,015,939	+				+0.7
6,015,955	-				+1.6
6,015,955	-				-3.0
6,016,183	+		Psyr_5071	0.53	-0.3
6,016,183	+		Psyr_5071	0.53	-0.5
6,016,184	-		Psyr_5071	0.54	+0.1
6,016,184	-		Psyr_5071	0.54	+1.6
6,016,184	-		Psyr_5071	0.54	-0.4
6,016,318	-		Psyr_5071	0.88	+0.6
6,016,318	-		Psyr_5071	0.88	+0.8
6,016,538	-				-0.2
6,016,538	-				+0.7
6,016,870	+		Psyr_5072	0.38	-0.9
6,017,459	+				+0.8
6,017,460	-				+0.0
6,017,533	+				+0.5
6,017,533	+				+0.6
6,017,533	+				-0.3
6,017,534	-				-0.5
6,017,534	-				+1.6
6,017,534	-				+0.2
6,017,534	-				-0.2
6,017,534	-				-0.1
6,017,534	-				-0.3
6,017,534	-				-0.3
6,017,657	+		Psyr_5073	0.35	-1.2
6,017,658	-		Psyr_5073	0.35	+0.2
6,017,734	-		Psyr_5073	0.55	+1.0
6,017,792	+		Psyr_5073	0.71	+3.6
6,017,793	-		Psyr_5073	0.71	-0.2
6,017,793	-		Psyr_5073	0.71	+0.2
6,017,793	-		Psyr_5073	0.71	+0.6
6,017,820	+		Psyr_5073	0.78	-0.1
6,017,844	+		Psyr_5073	0.85	+1.2
6,017,844	+		Psyr_5073	0.85	+0.6
6,017,844	+		Psyr_5073	0.85	+0.8
6,017,845	-		Psyr_5073	0.85	-0.1
6,017,845	-		Psyr_5073	0.85	-1.3
6,018,139	+		Psyr_5074	0.36	-1.2
6,018,139	+		Psyr_5074	0.36	+0.2
6,018,140	-		Psyr_5074	0.36	-0.5
6,018,140	-		Psyr_5074	0.36	+2.1
6,018,250	+		Psyr_5074	0.53	+1.1
6,018,251	-		Psyr_5074	0.53	-0.9
6,018,423	+		Psyr_5074	0.80	-0.4
6,018,423	+		Psyr_5074	0.80	-0.7
6,018,423	+		Psyr_5074	0.80	+0.1
6,018,423	+		Psyr_5074	0.80	-0.7
6,018,423	+		Psyr_5074	0.80	+1.0
6,018,423	+		Psyr_5074	0.80	-0.4
6,018,423	+		Psyr_5074	0.80	+1.8
6,018,423	+		Psyr_5074	0.80	-0.2
6,018,423	+		Psyr_5074	0.80	+0.9
6,018,423	+		Psyr_5074	0.80	-1.5
6,018,424	-		Psyr_5074	0.80	-0.1
6,018,424	-		Psyr_5074	0.80	+1.2
6,018,424	-		Psyr_5074	0.80	+1.0
6,018,424	-		Psyr_5074	0.80	+0.8
6,018,424	-		Psyr_5074	0.80	+0.2
6,018,424	-		Psyr_5074	0.80	-0.2
6,018,424	-		Psyr_5074	0.80	-1.6
6,018,424	-		Psyr_5074	0.80	-0.4
6,018,424	-		Psyr_5074	0.80	-0.0
6,018,424	-		Psyr_5074	0.80	+0.0
6,018,424	-		Psyr_5074	0.80	-0.4