Experiment: KB with Flavone 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4361 and Psyr_4362 are separated by 214 nucleotides Psyr_4362 and Psyr_4363 overlap by 1 nucleotides
Psyr_4361: Psyr_4361 - penicillin-binding protein 6, Serine peptidase, MEROPS family S11, at 5,213,965 to 5,215,152
_4361
Psyr_4362: Psyr_4362 - Rare lipoprotein A, at 5,215,367 to 5,216,395
_4362
Psyr_4363: Psyr_4363 - membrane-bound lytic murein transglycosylase B, at 5,216,395 to 5,217,402
_4363
Position (kb) 5215
5216
5217 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5214.401 kb on - strand, within Psyr_4361 at 5214.401 kb on - strand, within Psyr_4361 at 5214.536 kb on + strand, within Psyr_4361 at 5214.537 kb on - strand, within Psyr_4361 at 5214.546 kb on - strand, within Psyr_4361 at 5214.912 kb on - strand, within Psyr_4361 at 5214.912 kb on - strand, within Psyr_4361 at 5215.144 kb on - strand at 5215.278 kb on - strand at 5215.278 kb on - strand at 5215.369 kb on - strand at 5215.369 kb on - strand at 5215.369 kb on - strand at 5215.369 kb on - strand at 5215.369 kb on - strand at 5215.386 kb on - strand at 5215.687 kb on - strand, within Psyr_4362 at 5215.687 kb on - strand, within Psyr_4362 at 5215.900 kb on - strand, within Psyr_4362 at 5215.969 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand at 5216.020 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand, within Psyr_4362 at 5216.092 kb on - strand, within Psyr_4362 at 5216.396 kb on + strand at 5216.397 kb on - strand at 5216.397 kb on - strand at 5216.397 kb on - strand at 5216.397 kb on - strand at 5216.397 kb on - strand at 5216.439 kb on - strand at 5216.441 kb on - strand at 5216.441 kb on - strand at 5216.441 kb on - strand at 5216.454 kb on - strand at 5216.454 kb on - strand at 5216.472 kb on - strand at 5216.557 kb on - strand, within Psyr_4363 at 5216.721 kb on - strand, within Psyr_4363 at 5216.849 kb on + strand, within Psyr_4363 at 5216.850 kb on - strand, within Psyr_4363 at 5216.988 kb on + strand, within Psyr_4363 at 5217.016 kb on + strand, within Psyr_4363 at 5217.016 kb on + strand, within Psyr_4363 at 5217.017 kb on - strand, within Psyr_4363 at 5217.017 kb on - strand, within Psyr_4363 at 5217.056 kb on + strand, within Psyr_4363 at 5217.056 kb on + strand, within Psyr_4363 at 5217.056 kb on + strand, within Psyr_4363 at 5217.057 kb on - strand, within Psyr_4363 at 5217.057 kb on - strand, within Psyr_4363 at 5217.057 kb on - strand, within Psyr_4363 at 5217.311 kb on + strand at 5217.311 kb on + strand at 5217.311 kb on + strand at 5217.312 kb on - strand at 5217.312 kb on - strand at 5217.387 kb on + strand at 5217.387 kb on + strand at 5217.388 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.125 mg/ml remove 5,214,401 - Psyr_4361 0.37 -0.8 5,214,401 - Psyr_4361 0.37 +0.2 5,214,536 + Psyr_4361 0.48 -0.9 5,214,537 - Psyr_4361 0.48 +0.1 5,214,546 - Psyr_4361 0.49 -2.9 5,214,912 - Psyr_4361 0.80 -1.9 5,214,912 - Psyr_4361 0.80 -1.1 5,215,144 - +0.4 5,215,278 - +0.4 5,215,278 - -0.1 5,215,369 - -0.1 5,215,369 - +0.8 5,215,369 - -0.1 5,215,369 - -0.9 5,215,369 - +0.5 5,215,386 - -0.7 5,215,687 - Psyr_4362 0.31 -0.8 5,215,687 - Psyr_4362 0.31 -1.0 5,215,900 - Psyr_4362 0.52 -2.7 5,215,969 - Psyr_4362 0.59 -1.7 5,216,020 - Psyr_4362 0.63 -2.7 5,216,020 - -1.3 5,216,020 - Psyr_4362 0.63 -0.9 5,216,020 - Psyr_4362 0.63 -1.3 5,216,020 - Psyr_4362 0.63 -0.3 5,216,020 - Psyr_4362 0.63 -2.2 5,216,092 - Psyr_4362 0.70 -2.8 5,216,396 + +0.7 5,216,397 - -0.7 5,216,397 - -0.9 5,216,397 - -2.2 5,216,397 - +0.9 5,216,397 - -0.2 5,216,439 - -0.3 5,216,441 - +0.7 5,216,441 - -0.2 5,216,441 - +0.1 5,216,454 - -0.7 5,216,454 - -1.1 5,216,472 - +0.3 5,216,557 - Psyr_4363 0.16 -1.5 5,216,721 - Psyr_4363 0.32 -1.3 5,216,849 + Psyr_4363 0.45 -0.7 5,216,850 - Psyr_4363 0.45 -0.4 5,216,988 + Psyr_4363 0.59 +0.5 5,217,016 + Psyr_4363 0.62 -0.2 5,217,016 + Psyr_4363 0.62 +4.1 5,217,017 - Psyr_4363 0.62 -1.1 5,217,017 - Psyr_4363 0.62 +0.3 5,217,056 + Psyr_4363 0.66 +0.6 5,217,056 + Psyr_4363 0.66 -1.2 5,217,056 + Psyr_4363 0.66 -0.9 5,217,057 - Psyr_4363 0.66 -0.6 5,217,057 - Psyr_4363 0.66 -1.2 5,217,057 - Psyr_4363 0.66 -1.8 5,217,311 + -2.7 5,217,311 + +0.4 5,217,311 + +0.7 5,217,312 - -1.5 5,217,312 - +0.5 5,217,387 + +0.0 5,217,387 + +1.2 5,217,388 - -1.2
Or see this region's nucleotide sequence