Experiment: KB with Flavone 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4342 and Psyr_4343 are separated by 296 nucleotides Psyr_4343 and Psyr_4344 are separated by 42 nucleotides Psyr_4344 and Psyr_4345 are separated by 139 nucleotides
Psyr_4342: Psyr_4342 - glutamate-1-semialdehyde 2,1-aminomutase, at 5,195,661 to 5,196,944
_4342
Psyr_4343: Psyr_4343 - Sel1-like repeat protein, at 5,197,241 to 5,197,789
_4343
Psyr_4344: Psyr_4344 - conserved hypothetical protein, at 5,197,832 to 5,198,158
_4344
Psyr_4345: Psyr_4345 - tRNA-i(6)A37 thiotransferase enzyme MiaB, at 5,198,298 to 5,199,626
_4345
Position (kb) 5197
5198 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5196.942 kb on + strand at 5196.942 kb on + strand at 5196.942 kb on + strand at 5196.942 kb on + strand at 5196.942 kb on + strand at 5196.943 kb on - strand at 5196.943 kb on - strand at 5196.943 kb on - strand at 5196.943 kb on - strand at 5196.943 kb on - strand at 5196.943 kb on - strand at 5196.943 kb on - strand at 5197.017 kb on + strand at 5197.017 kb on + strand at 5197.018 kb on - strand at 5197.018 kb on - strand at 5197.018 kb on - strand at 5197.018 kb on - strand at 5197.021 kb on + strand at 5197.021 kb on + strand at 5197.022 kb on - strand at 5197.022 kb on - strand at 5197.022 kb on - strand at 5197.036 kb on + strand at 5197.036 kb on + strand at 5197.036 kb on + strand at 5197.037 kb on - strand at 5197.037 kb on - strand at 5197.037 kb on - strand at 5197.059 kb on + strand at 5197.059 kb on + strand at 5197.060 kb on - strand at 5197.060 kb on - strand at 5197.060 kb on - strand at 5197.060 kb on - strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.061 kb on + strand at 5197.062 kb on - strand at 5197.062 kb on - strand at 5197.062 kb on - strand at 5197.062 kb on - strand at 5197.062 kb on - strand at 5197.062 kb on - strand at 5197.089 kb on + strand at 5197.151 kb on - strand at 5197.166 kb on + strand at 5197.166 kb on + strand at 5197.166 kb on + strand at 5197.166 kb on + strand at 5197.167 kb on - strand at 5197.167 kb on - strand at 5197.167 kb on - strand at 5197.194 kb on - strand at 5197.228 kb on + strand at 5197.228 kb on + strand at 5197.228 kb on + strand at 5197.228 kb on + strand at 5197.229 kb on - strand at 5197.229 kb on - strand at 5197.266 kb on + strand at 5197.266 kb on + strand at 5197.266 kb on + strand at 5197.266 kb on + strand at 5197.266 kb on + strand at 5197.266 kb on + strand at 5197.267 kb on - strand at 5197.326 kb on + strand, within Psyr_4343 at 5197.327 kb on - strand, within Psyr_4343 at 5197.433 kb on + strand, within Psyr_4343 at 5197.433 kb on + strand, within Psyr_4343 at 5197.434 kb on - strand, within Psyr_4343 at 5197.451 kb on + strand, within Psyr_4343 at 5197.451 kb on + strand, within Psyr_4343 at 5197.451 kb on + strand, within Psyr_4343 at 5197.451 kb on + strand, within Psyr_4343 at 5197.452 kb on - strand, within Psyr_4343 at 5197.452 kb on - strand, within Psyr_4343 at 5197.452 kb on - strand, within Psyr_4343 at 5197.452 kb on - strand, within Psyr_4343 at 5197.454 kb on + strand, within Psyr_4343 at 5197.455 kb on - strand, within Psyr_4343 at 5197.499 kb on + strand, within Psyr_4343 at 5197.500 kb on - strand, within Psyr_4343 at 5197.601 kb on + strand, within Psyr_4343 at 5197.601 kb on + strand, within Psyr_4343 at 5197.602 kb on - strand, within Psyr_4343 at 5197.602 kb on - strand, within Psyr_4343 at 5197.602 kb on - strand, within Psyr_4343 at 5197.602 kb on - strand, within Psyr_4343 at 5197.733 kb on + strand, within Psyr_4343 at 5197.733 kb on + strand, within Psyr_4343 at 5197.733 kb on + strand, within Psyr_4343 at 5197.734 kb on - strand, within Psyr_4343 at 5197.734 kb on - strand, within Psyr_4343 at 5197.734 kb on - strand, within Psyr_4343 at 5197.734 kb on - strand, within Psyr_4343 at 5197.833 kb on + strand at 5197.834 kb on - strand at 5197.834 kb on - strand at 5197.865 kb on + strand, within Psyr_4344 at 5197.865 kb on + strand, within Psyr_4344 at 5197.865 kb on + strand, within Psyr_4344 at 5197.865 kb on + strand, within Psyr_4344 at 5197.865 kb on + strand, within Psyr_4344 at 5197.865 kb on + strand, within Psyr_4344 at 5197.865 kb on + strand, within Psyr_4344 at 5197.865 kb on + strand, within Psyr_4344 at 5197.865 kb on + strand, within Psyr_4344 at 5197.866 kb on - strand, within Psyr_4344 at 5197.866 kb on - strand, within Psyr_4344 at 5197.866 kb on - strand, within Psyr_4344 at 5197.866 kb on - strand, within Psyr_4344 at 5197.866 kb on - strand, within Psyr_4344 at 5197.866 kb on - strand, within Psyr_4344 at 5197.866 kb on - strand, within Psyr_4344 at 5198.076 kb on + strand, within Psyr_4344 at 5198.077 kb on - strand, within Psyr_4344 at 5198.077 kb on - strand, within Psyr_4344 at 5198.091 kb on + strand, within Psyr_4344 at 5198.091 kb on + strand, within Psyr_4344 at 5198.091 kb on + strand, within Psyr_4344 at 5198.091 kb on + strand, within Psyr_4344 at 5198.091 kb on + strand, within Psyr_4344 at 5198.092 kb on - strand, within Psyr_4344 at 5198.092 kb on - strand, within Psyr_4344 at 5198.092 kb on - strand, within Psyr_4344 at 5198.092 kb on - strand, within Psyr_4344 at 5198.092 kb on - strand, within Psyr_4344 at 5198.133 kb on + strand at 5198.133 kb on + strand at 5198.133 kb on + strand at 5198.133 kb on + strand at 5198.133 kb on + strand at 5198.134 kb on - strand at 5198.134 kb on - strand at 5198.200 kb on + strand at 5198.200 kb on + strand at 5198.200 kb on + strand at 5198.201 kb on - strand at 5198.201 kb on - strand at 5198.201 kb on - strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.202 kb on + strand at 5198.203 kb on - strand at 5198.203 kb on - strand at 5198.203 kb on - strand at 5198.203 kb on - strand at 5198.203 kb on - strand at 5198.203 kb on - strand at 5198.203 kb on - strand at 5198.203 kb on - strand at 5198.260 kb on + strand at 5198.260 kb on + strand at 5198.260 kb on + strand at 5198.261 kb on - strand at 5198.261 kb on - strand at 5198.261 kb on - strand at 5198.261 kb on - strand at 5198.261 kb on - strand at 5198.262 kb on + strand at 5198.262 kb on + strand at 5198.262 kb on + strand at 5198.262 kb on + strand at 5198.262 kb on + strand at 5198.262 kb on + strand at 5198.262 kb on + strand at 5198.262 kb on + strand at 5198.263 kb on - strand at 5198.263 kb on - strand at 5198.263 kb on - strand at 5198.263 kb on - strand at 5198.263 kb on - strand at 5198.263 kb on - strand at 5198.263 kb on - strand at 5198.313 kb on + strand at 5198.314 kb on - strand at 5198.314 kb on - strand at 5198.314 kb on - strand at 5198.314 kb on - strand at 5198.314 kb on - strand at 5198.346 kb on + strand at 5198.438 kb on + strand, within Psyr_4345 at 5198.439 kb on - strand, within Psyr_4345 at 5198.589 kb on + strand, within Psyr_4345 at 5198.589 kb on + strand, within Psyr_4345 at 5198.589 kb on + strand, within Psyr_4345 at 5198.589 kb on + strand, within Psyr_4345 at 5198.590 kb on - strand, within Psyr_4345 at 5198.590 kb on - strand, within Psyr_4345 at 5198.590 kb on - strand, within Psyr_4345 at 5198.590 kb on - strand, within Psyr_4345 at 5198.590 kb on - strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.745 kb on + strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.746 kb on - strand, within Psyr_4345 at 5198.775 kb on + strand, within Psyr_4345 at 5198.776 kb on - strand, within Psyr_4345 at 5198.776 kb on - strand, within Psyr_4345
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.125 mg/ml remove 5,196,942 + -0.9 5,196,942 + -0.2 5,196,942 + +2.0 5,196,942 + -0.3 5,196,942 + +0.5 5,196,943 - +0.2 5,196,943 - +0.1 5,196,943 - +0.3 5,196,943 - +0.1 5,196,943 - -0.3 5,196,943 - -0.2 5,196,943 - +1.1 5,197,017 + -1.8 5,197,017 + -0.1 5,197,018 - +0.4 5,197,018 - -1.1 5,197,018 - +0.4 5,197,018 - +0.1 5,197,021 + +0.8 5,197,021 + +0.8 5,197,022 - +0.8 5,197,022 - -0.9 5,197,022 - +0.8 5,197,036 + +1.1 5,197,036 + +1.9 5,197,036 + -0.7 5,197,037 - +0.1 5,197,037 - -1.3 5,197,037 - -1.9 5,197,059 + -0.3 5,197,059 + +0.1 5,197,060 - -0.2 5,197,060 - -2.0 5,197,060 - -0.6 5,197,060 - +1.4 5,197,061 + +0.7 5,197,061 + +0.0 5,197,061 + -0.7 5,197,061 + +0.1 5,197,061 + +0.3 5,197,061 + -0.9 5,197,061 + +1.1 5,197,061 + -0.5 5,197,061 + -0.4 5,197,061 + -1.3 5,197,061 + -0.2 5,197,061 + -0.1 5,197,061 + +1.6 5,197,062 - +0.1 5,197,062 - +0.5 5,197,062 - +1.0 5,197,062 - -0.3 5,197,062 - +0.7 5,197,062 - +0.1 5,197,089 + +1.3 5,197,151 - -0.9 5,197,166 + -0.6 5,197,166 + -1.0 5,197,166 + -1.5 5,197,166 + -0.3 5,197,167 - -1.5 5,197,167 - -0.5 5,197,167 - -0.6 5,197,194 - -0.3 5,197,228 + -0.3 5,197,228 + -0.9 5,197,228 + -1.8 5,197,228 + -2.6 5,197,229 - +2.2 5,197,229 - -1.2 5,197,266 + -1.6 5,197,266 + -1.3 5,197,266 + -0.9 5,197,266 + +0.7 5,197,266 + -0.5 5,197,266 + -0.7 5,197,267 - -0.1 5,197,326 + Psyr_4343 0.15 -1.3 5,197,327 - Psyr_4343 0.16 +0.3 5,197,433 + Psyr_4343 0.35 +0.1 5,197,433 + Psyr_4343 0.35 +0.7 5,197,434 - Psyr_4343 0.35 -1.3 5,197,451 + Psyr_4343 0.38 +2.0 5,197,451 + Psyr_4343 0.38 -0.4 5,197,451 + Psyr_4343 0.38 -0.1 5,197,451 + Psyr_4343 0.38 -1.9 5,197,452 - Psyr_4343 0.38 -0.9 5,197,452 - Psyr_4343 0.38 +0.4 5,197,452 - Psyr_4343 0.38 +0.7 5,197,452 - Psyr_4343 0.38 -1.1 5,197,454 + Psyr_4343 0.39 -1.3 5,197,455 - Psyr_4343 0.39 -0.3 5,197,499 + Psyr_4343 0.47 -1.6 5,197,500 - Psyr_4343 0.47 -1.3 5,197,601 + Psyr_4343 0.66 -1.4 5,197,601 + Psyr_4343 0.66 +0.1 5,197,602 - Psyr_4343 0.66 -1.8 5,197,602 - Psyr_4343 0.66 -1.8 5,197,602 - Psyr_4343 0.66 -1.0 5,197,602 - Psyr_4343 0.66 -1.0 5,197,733 + Psyr_4343 0.90 -0.2 5,197,733 + Psyr_4343 0.90 -0.9 5,197,733 + Psyr_4343 0.90 -1.3 5,197,734 - Psyr_4343 0.90 +0.2 5,197,734 - Psyr_4343 0.90 +0.8 5,197,734 - Psyr_4343 0.90 -0.3 5,197,734 - Psyr_4343 0.90 +0.1 5,197,833 + +0.3 5,197,834 - +1.5 5,197,834 - +1.0 5,197,865 + Psyr_4344 0.10 -1.2 5,197,865 + Psyr_4344 0.10 -2.2 5,197,865 + Psyr_4344 0.10 -1.1 5,197,865 + Psyr_4344 0.10 -0.1 5,197,865 + Psyr_4344 0.10 -0.2 5,197,865 + Psyr_4344 0.10 -3.3 5,197,865 + Psyr_4344 0.10 +0.0 5,197,865 + Psyr_4344 0.10 +0.5 5,197,865 + Psyr_4344 0.10 -0.8 5,197,866 - Psyr_4344 0.10 +0.5 5,197,866 - Psyr_4344 0.10 +0.1 5,197,866 - Psyr_4344 0.10 -0.7 5,197,866 - Psyr_4344 0.10 -0.5 5,197,866 - Psyr_4344 0.10 -1.2 5,197,866 - Psyr_4344 0.10 +1.7 5,197,866 - Psyr_4344 0.10 +0.8 5,198,076 + Psyr_4344 0.75 -0.8 5,198,077 - Psyr_4344 0.75 +1.2 5,198,077 - Psyr_4344 0.75 -0.2 5,198,091 + Psyr_4344 0.79 +0.2 5,198,091 + Psyr_4344 0.79 +0.9 5,198,091 + Psyr_4344 0.79 -0.6 5,198,091 + Psyr_4344 0.79 -0.5 5,198,091 + Psyr_4344 0.79 -0.9 5,198,092 - Psyr_4344 0.80 +1.3 5,198,092 - Psyr_4344 0.80 -0.2 5,198,092 - Psyr_4344 0.80 +0.2 5,198,092 - Psyr_4344 0.80 -0.2 5,198,092 - Psyr_4344 0.80 -0.7 5,198,133 + -0.2 5,198,133 + +0.1 5,198,133 + -0.7 5,198,133 + -0.1 5,198,133 + -0.4 5,198,134 - -0.3 5,198,134 - -0.8 5,198,200 + +0.7 5,198,200 + +1.8 5,198,200 + -0.1 5,198,201 - +0.5 5,198,201 - +0.2 5,198,201 - -0.6 5,198,202 + +0.3 5,198,202 + -0.7 5,198,202 + +0.3 5,198,202 + +0.1 5,198,202 + -0.8 5,198,202 + +0.4 5,198,202 + +0.8 5,198,202 + -0.1 5,198,202 + -2.4 5,198,202 + +0.4 5,198,202 + -1.2 5,198,202 + -1.3 5,198,202 + -1.8 5,198,202 + -0.9 5,198,202 + +1.2 5,198,202 + +1.1 5,198,203 - +0.6 5,198,203 - -2.2 5,198,203 - +0.3 5,198,203 - -2.0 5,198,203 - +0.1 5,198,203 - +0.9 5,198,203 - +0.5 5,198,203 - +0.3 5,198,260 + -0.0 5,198,260 + -0.1 5,198,260 + -0.7 5,198,261 - -0.3 5,198,261 - -1.7 5,198,261 - +1.0 5,198,261 - -1.2 5,198,261 - +0.7 5,198,262 + +0.5 5,198,262 + +0.2 5,198,262 + +0.1 5,198,262 + -1.7 5,198,262 + -1.0 5,198,262 + +1.2 5,198,262 + +0.4 5,198,262 + -0.2 5,198,263 - +0.4 5,198,263 - -0.7 5,198,263 - -0.2 5,198,263 - -1.2 5,198,263 - -0.7 5,198,263 - +2.7 5,198,263 - -0.6 5,198,313 + -0.6 5,198,314 - -0.2 5,198,314 - +0.7 5,198,314 - -0.8 5,198,314 - -0.4 5,198,314 - +1.1 5,198,346 + -1.7 5,198,438 + Psyr_4345 0.11 +0.1 5,198,439 - Psyr_4345 0.11 +0.7 5,198,589 + Psyr_4345 0.22 +0.9 5,198,589 + Psyr_4345 0.22 -1.2 5,198,589 + Psyr_4345 0.22 -0.6 5,198,589 + Psyr_4345 0.22 -0.3 5,198,590 - Psyr_4345 0.22 +0.5 5,198,590 - Psyr_4345 0.22 +0.1 5,198,590 - Psyr_4345 0.22 -0.2 5,198,590 - Psyr_4345 0.22 -0.0 5,198,590 - Psyr_4345 0.22 +0.8 5,198,745 + Psyr_4345 0.34 +0.7 5,198,745 + Psyr_4345 0.34 -1.2 5,198,745 + Psyr_4345 0.34 -0.3 5,198,745 + Psyr_4345 0.34 -0.5 5,198,745 + Psyr_4345 0.34 -0.6 5,198,745 + Psyr_4345 0.34 -0.1 5,198,745 + Psyr_4345 0.34 +1.5 5,198,745 + Psyr_4345 0.34 +0.5 5,198,745 + Psyr_4345 0.34 -0.1 5,198,745 + Psyr_4345 0.34 -1.1 5,198,745 + Psyr_4345 0.34 -1.3 5,198,745 + Psyr_4345 0.34 +0.0 5,198,745 + Psyr_4345 0.34 -0.8 5,198,745 + Psyr_4345 0.34 +0.7 5,198,745 + Psyr_4345 0.34 +0.0 5,198,746 - Psyr_4345 0.34 +0.2 5,198,746 - Psyr_4345 0.34 -0.8 5,198,746 - Psyr_4345 0.34 +0.2 5,198,746 - Psyr_4345 0.34 -1.0 5,198,746 - Psyr_4345 0.34 -0.9 5,198,746 - Psyr_4345 0.34 -0.5 5,198,746 - Psyr_4345 0.34 -1.2 5,198,746 - Psyr_4345 0.34 -0.1 5,198,746 - Psyr_4345 0.34 +0.1 5,198,746 - Psyr_4345 0.34 +1.5 5,198,746 - Psyr_4345 0.34 +0.1 5,198,746 - Psyr_4345 0.34 +0.6 5,198,746 - Psyr_4345 0.34 +0.1 5,198,746 - Psyr_4345 0.34 +0.1 5,198,746 - Psyr_4345 0.34 +0.4 5,198,746 - Psyr_4345 0.34 +1.4 5,198,775 + Psyr_4345 0.36 +0.2 5,198,776 - Psyr_4345 0.36 +0.5 5,198,776 - Psyr_4345 0.36 +0.7
Or see this region's nucleotide sequence