Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2946

Experiment: KB with Flavone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Flavone 0.125 mg/ml
3,535,526	+				-1.0
3,535,526	+				-0.0
3,535,526	+				-1.1
3,535,526	+				+0.3
3,535,526	+				-1.0
3,535,526	+				-1.2
3,535,526	+				+0.3
3,535,527	-				+0.1
3,535,527	-				-0.8
3,535,527	-				+0.5
3,535,573	+				+2.8
3,535,573	+				-1.1
3,535,574	-		Psyr_2945	0.10	+0.1
3,535,574	-		Psyr_2945	0.10	+1.0
3,535,574	-		Psyr_2945	0.10	+1.7
3,535,574	-		Psyr_2945	0.10	-0.2
3,535,574	-		Psyr_2945	0.10	+0.7
3,535,574	-		Psyr_2945	0.10	-0.6
3,535,574	-		Psyr_2945	0.10	-1.5
3,535,596	-		Psyr_2945	0.13	-1.0
3,535,596	-		Psyr_2945	0.13	+0.3
3,535,844	-		Psyr_2945	0.40	+0.2
3,535,862	+		Psyr_2945	0.42	+0.6
3,535,882	-		Psyr_2945	0.44	-0.1
3,535,882	-		Psyr_2945	0.44	+0.7
3,536,004	+		Psyr_2945	0.58	+1.3
3,536,024	+		Psyr_2945	0.60	-0.3
3,536,044	+		Psyr_2945	0.62	+1.2
3,536,045	-		Psyr_2945	0.62	+0.3
3,536,084	-		Psyr_2945	0.67	+2.0
3,536,085	+		Psyr_2945	0.67	-0.9
3,536,149	+		Psyr_2945	0.74	+0.0
3,536,149	+		Psyr_2945	0.74	-0.1
3,536,149	+		Psyr_2945	0.74	-0.0
3,536,149	+		Psyr_2945	0.74	-0.7
3,536,149	+		Psyr_2945	0.74	+2.1
3,536,183	+				-1.3
3,536,183	+		Psyr_2945	0.78	-0.0
3,536,209	+		Psyr_2945	0.80	+1.2
3,536,210	-		Psyr_2945	0.81	-0.3
3,536,221	-		Psyr_2945	0.82	-0.1
3,536,266	+		Psyr_2945	0.87	+0.3
3,536,295	+				-0.4
3,536,296	-				+3.1
3,536,325	+				+0.4
3,536,326	-				+0.3
3,536,408	+				-0.3
3,536,462	-				-0.7
3,536,472	+				+1.6
3,536,472	+				+2.1
3,536,472	+				+1.0
3,536,472	+				+0.3
3,536,472	+				-0.7
3,536,472	+				+1.5
3,536,472	+				-0.1
3,536,472	+				+0.9
3,536,472	+				+0.9
3,536,472	+				+0.3
3,536,472	+				+0.6
3,536,472	+				+0.6
3,536,473	-				-0.2
3,536,473	-				+0.2
3,536,473	-				-0.4
3,536,473	-				-0.7
3,536,473	-				+0.9
3,536,473	-				-0.5
3,536,473	-				-0.4
3,536,473	-				+1.1
3,536,473	-				-0.3
3,536,639	+		Psyr_2946	0.67	-0.3
3,536,639	+		Psyr_2946	0.67	-0.1
3,536,640	-		Psyr_2946	0.67	+0.8
3,536,640	-		Psyr_2946	0.67	+1.6
3,536,640	-		Psyr_2946	0.67	+2.4
3,536,640	-		Psyr_2946	0.67	+0.4
3,536,645	+		Psyr_2946	0.69	+0.7
3,536,645	+		Psyr_2946	0.69	+0.7
3,536,645	+		Psyr_2946	0.69	+1.1
3,536,645	+		Psyr_2946	0.69	-0.4
3,536,646	-		Psyr_2946	0.69	+1.1
3,536,646	-		Psyr_2946	0.69	+0.7
3,536,646	-		Psyr_2946	0.69	-0.0
3,536,646	-		Psyr_2946	0.69	-0.3
3,536,664	+		Psyr_2946	0.76	+0.8
3,536,665	-		Psyr_2946	0.77	-0.3
3,536,665	-				+0.3
3,536,665	-		Psyr_2946	0.77	+1.4
3,536,665	-		Psyr_2946	0.77	+1.0
3,536,665	-		Psyr_2946	0.77	-0.8
3,536,740	+				+1.4
3,536,740	+				+2.8
3,536,741	-				-1.0
3,536,741	-				-0.4
3,536,741	-				-0.0
3,536,823	+		Psyr_2947	0.19	+0.8
3,536,824	-		Psyr_2947	0.19	+1.0
3,536,939	-		Psyr_2947	0.46	-0.2
3,536,970	+		Psyr_2947	0.54	+0.9
3,536,984	-		Psyr_2947	0.57	+0.3
3,536,984	-		Psyr_2947	0.57	+1.0
3,536,986	-		Psyr_2947	0.57	-1.1
3,537,011	+		Psyr_2947	0.63	+1.0
3,537,011	+		Psyr_2947	0.63	-0.9
3,537,012	-		Psyr_2947	0.64	+0.7
3,537,012	-		Psyr_2947	0.64	-0.3
3,537,012	-		Psyr_2947	0.64	-0.0
3,537,133	+				+2.1
3,537,133	+				+0.3
3,537,134	-				+3.1
3,537,134	-				-2.2
3,537,134	-				+0.1
3,537,247	+				-0.7
3,537,247	+				-0.0
3,537,247	+				-0.3
3,537,248	-				+1.3
3,537,248	-				+0.7
3,537,248	-				-1.7
3,537,248	-				+0.5
3,537,248	-				-0.2
3,537,290	+		Psyr_2948	0.12	-0.2
3,537,396	+		Psyr_2948	0.29	-1.9
3,537,475	+		Psyr_2948	0.41	-0.6
3,537,475	+		Psyr_2948	0.41	+0.6
3,537,475	+		Psyr_2948	0.41	-0.0
3,537,475	+		Psyr_2948	0.41	-2.2
3,537,476	-		Psyr_2948	0.41	+0.7
3,537,476	-		Psyr_2948	0.41	+1.2
3,537,563	+		Psyr_2948	0.54	+0.1
3,537,563	+		Psyr_2948	0.54	-1.2
3,537,564	-		Psyr_2948	0.55	+0.6
3,537,564	-		Psyr_2948	0.55	+0.4
3,537,564	-		Psyr_2948	0.55	+0.8
3,537,593	-		Psyr_2948	0.59	+0.3
3,537,596	+		Psyr_2948	0.60	+0.8
3,537,596	+		Psyr_2948	0.60	+0.3
3,537,596	+		Psyr_2948	0.60	+0.3
3,537,596	+		Psyr_2948	0.60	-0.1
3,537,597	-		Psyr_2948	0.60	-0.9
3,537,597	-		Psyr_2948	0.60	-0.4
3,537,597	-		Psyr_2948	0.60	+0.4
3,537,597	-		Psyr_2948	0.60	+2.7
3,537,597	-		Psyr_2948	0.60	-0.9
3,537,597	-		Psyr_2948	0.60	+0.3
3,537,676	+		Psyr_2948	0.72	-0.7