Experiment: KB with Flavone 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2467 and Psyr_2468 overlap by 4 nucleotides Psyr_2468 and Psyr_2469 are separated by 14 nucleotides
Psyr_2467: Psyr_2467 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit, at 2,858,815 to 2,860,764
_2467
Psyr_2468: Psyr_2468 - Enoyl-CoA hydratase/isomerase, at 2,860,761 to 2,861,636
_2468
Psyr_2469: Psyr_2469 - Propionyl-CoA carboxylase, at 2,861,651 to 2,863,258
_2469
Position (kb)
2860
2861
2862 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2859.848 kb on + strand, within Psyr_2467 at 2859.848 kb on + strand, within Psyr_2467 at 2859.848 kb on + strand, within Psyr_2467 at 2859.848 kb on + strand, within Psyr_2467 at 2859.849 kb on - strand, within Psyr_2467 at 2859.868 kb on + strand, within Psyr_2467 at 2859.869 kb on - strand, within Psyr_2467 at 2859.951 kb on - strand, within Psyr_2467 at 2860.085 kb on + strand, within Psyr_2467 at 2860.085 kb on + strand, within Psyr_2467 at 2860.148 kb on + strand, within Psyr_2467 at 2860.149 kb on - strand, within Psyr_2467 at 2860.149 kb on - strand, within Psyr_2467 at 2860.574 kb on + strand at 2860.574 kb on + strand at 2860.575 kb on - strand at 2860.575 kb on - strand at 2860.630 kb on - strand at 2861.141 kb on - strand, within Psyr_2468 at 2861.347 kb on + strand, within Psyr_2468 at 2861.347 kb on + strand, within Psyr_2468 at 2861.347 kb on + strand, within Psyr_2468 at 2861.348 kb on - strand, within Psyr_2468 at 2861.392 kb on + strand, within Psyr_2468 at 2861.393 kb on - strand, within Psyr_2468 at 2861.393 kb on - strand, within Psyr_2468 at 2861.497 kb on - strand, within Psyr_2468 at 2861.497 kb on - strand, within Psyr_2468 at 2861.611 kb on - strand at 2861.678 kb on - strand at 2861.784 kb on + strand at 2861.805 kb on + strand at 2861.957 kb on + strand, within Psyr_2469 at 2861.958 kb on - strand, within Psyr_2469 at 2861.994 kb on + strand, within Psyr_2469 at 2862.105 kb on + strand, within Psyr_2469 at 2862.105 kb on + strand, within Psyr_2469 at 2862.105 kb on + strand, within Psyr_2469 at 2862.106 kb on - strand, within Psyr_2469 at 2862.106 kb on - strand, within Psyr_2469 at 2862.350 kb on + strand, within Psyr_2469 at 2862.351 kb on - strand, within Psyr_2469 at 2862.351 kb on - strand, within Psyr_2469 at 2862.516 kb on + strand, within Psyr_2469
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.125 mg/ml remove 2,859,848 + Psyr_2467 0.53 +0.5 2,859,848 + Psyr_2467 0.53 +2.5 2,859,848 + Psyr_2467 0.53 -0.0 2,859,848 + Psyr_2467 0.53 -0.6 2,859,849 - Psyr_2467 0.53 +0.7 2,859,868 + Psyr_2467 0.54 -0.4 2,859,869 - Psyr_2467 0.54 +0.4 2,859,951 - Psyr_2467 0.58 -0.2 2,860,085 + Psyr_2467 0.65 +0.1 2,860,085 + Psyr_2467 0.65 -1.5 2,860,148 + Psyr_2467 0.68 -1.2 2,860,149 - Psyr_2467 0.68 -0.4 2,860,149 - Psyr_2467 0.68 +0.4 2,860,574 + -1.8 2,860,574 + +1.9 2,860,575 - +0.5 2,860,575 - +0.4 2,860,630 - +3.0 2,861,141 - Psyr_2468 0.43 -1.1 2,861,347 + Psyr_2468 0.67 -0.7 2,861,347 + Psyr_2468 0.67 -0.6 2,861,347 + Psyr_2468 0.67 +0.0 2,861,348 - Psyr_2468 0.67 -2.2 2,861,392 + Psyr_2468 0.72 +0.7 2,861,393 - Psyr_2468 0.72 +0.3 2,861,393 - Psyr_2468 0.72 -0.8 2,861,497 - Psyr_2468 0.84 -1.4 2,861,497 - Psyr_2468 0.84 -0.5 2,861,611 - +0.2 2,861,678 - +0.2 2,861,784 + +0.8 2,861,805 + -1.2 2,861,957 + Psyr_2469 0.19 -1.8 2,861,958 - Psyr_2469 0.19 -0.6 2,861,994 + Psyr_2469 0.21 -0.1 2,862,105 + Psyr_2469 0.28 -0.3 2,862,105 + Psyr_2469 0.28 +0.2 2,862,105 + Psyr_2469 0.28 +0.2 2,862,106 - Psyr_2469 0.28 -0.2 2,862,106 - Psyr_2469 0.28 -1.7 2,862,350 + Psyr_2469 0.43 -0.8 2,862,351 - Psyr_2469 0.44 +0.0 2,862,351 - Psyr_2469 0.44 +0.5 2,862,516 + Psyr_2469 0.54 +1.4
Or see this region's nucleotide sequence