Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2290

Experiment: KB with Flavone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Flavone 0.125 mg/ml
2,658,845	+		Psyr_2288	0.78	-0.0
2,658,845	+		Psyr_2288	0.78	+0.4
2,658,845	+		Psyr_2288	0.78	-0.5
2,658,846	-		Psyr_2288	0.78	-1.4
2,658,846	-		Psyr_2288	0.78	-0.5
2,658,851	+		Psyr_2288	0.79	-0.0
2,658,851	+		Psyr_2288	0.79	-0.3
2,658,851	+		Psyr_2288	0.79	+0.6
2,658,852	-		Psyr_2288	0.79	-1.1
2,658,852	-		Psyr_2288	0.79	-0.0
2,658,911	+		Psyr_2288	0.86	+0.3
2,658,911	+		Psyr_2288	0.86	-1.0
2,658,911	+		Psyr_2288	0.86	+1.6
2,658,911	+		Psyr_2288	0.86	-0.2
2,658,911	+		Psyr_2288	0.86	+0.3
2,658,911	+		Psyr_2288	0.86	-0.2
2,658,911	+		Psyr_2288	0.86	-0.7
2,658,912	-		Psyr_2288	0.86	+0.7
2,658,912	-		Psyr_2288	0.86	-0.5
2,658,912	-		Psyr_2288	0.86	+0.3
2,658,912	-		Psyr_2288	0.86	-1.9
2,658,912	-		Psyr_2288	0.86	-0.5
2,659,079	-		Psyr_2289	0.15	+0.6
2,659,389	-				-0.6
2,659,417	-				-0.1
2,659,417	-				-0.6
2,659,417	-				-0.5
2,659,427	+				+0.3
2,659,428	-				-0.2
2,659,434	+				-0.6
2,659,434	+				+0.4
2,659,435	-				-1.4
2,659,435	-				-1.4
2,659,603	-				-0.1
2,659,615	+				-0.8
2,659,722	+				-0.4
2,659,722	+				+0.8
2,660,092	+		Psyr_2290	0.16	-1.0
2,660,093	-		Psyr_2290	0.16	-0.4
2,660,093	-		Psyr_2290	0.16	+0.0
2,660,216	+		Psyr_2290	0.21	-0.2
2,660,303	+		Psyr_2290	0.25	+2.3
2,660,358	+		Psyr_2290	0.27	+0.4
2,660,359	-		Psyr_2290	0.27	-0.8
2,660,408	+		Psyr_2290	0.29	+1.0
2,660,409	-		Psyr_2290	0.30	+1.1
2,660,409	-		Psyr_2290	0.30	-0.6
2,660,463	-		Psyr_2290	0.32	+0.3
2,660,532	-		Psyr_2290	0.35	-0.7
2,660,558	+		Psyr_2290	0.36	-0.2
2,660,559	-		Psyr_2290	0.36	-1.3
2,660,559	-		Psyr_2290	0.36	-0.6
2,660,559	-		Psyr_2290	0.36	-1.3
2,660,559	-		Psyr_2290	0.36	+0.6
2,660,559	-		Psyr_2290	0.36	-0.5
2,660,559	-		Psyr_2290	0.36	+0.1
2,660,559	-		Psyr_2290	0.36	+1.4
2,660,559	-		Psyr_2290	0.36	+0.7
2,660,559	-		Psyr_2290	0.36	+0.7
2,660,560	+		Psyr_2290	0.36	+0.1
2,660,561	-		Psyr_2290	0.36	+1.0
2,660,726	+		Psyr_2290	0.43	+0.7
2,660,756	+		Psyr_2290	0.44	-1.6
2,660,757	-		Psyr_2290	0.44	-0.3
2,660,757	-		Psyr_2290	0.44	-0.8
2,660,831	+		Psyr_2290	0.47	-0.2
2,660,984	+		Psyr_2290	0.53	-0.1
2,660,985	-		Psyr_2290	0.53	+0.8
2,660,985	-		Psyr_2290	0.53	+0.7
2,661,066	-		Psyr_2290	0.57	-1.1
2,661,132	-		Psyr_2290	0.60	+0.4
2,661,394	-		Psyr_2290	0.70	+0.1
2,661,394	-		Psyr_2290	0.70	+1.2
2,661,457	+		Psyr_2290	0.73	-1.0
2,661,457	+		Psyr_2290	0.73	-0.3
2,661,457	+		Psyr_2290	0.73	-1.1
2,661,458	-		Psyr_2290	0.73	-0.5
2,661,503	+		Psyr_2290	0.75	+0.1
2,661,504	-		Psyr_2290	0.75	+0.1
2,661,504	-		Psyr_2290	0.75	+0.1
2,661,504	-		Psyr_2290	0.75	-1.2
2,661,504	-		Psyr_2290	0.75	-0.6
2,661,536	+		Psyr_2290	0.76	-0.3
2,661,537	-		Psyr_2290	0.76	+0.3
2,661,552	-		Psyr_2290	0.77	-1.0
2,661,606	-		Psyr_2290	0.79	+0.1
2,661,611	+		Psyr_2290	0.80	-0.0
2,661,654	-		Psyr_2290	0.81	+0.7
2,661,659	+		Psyr_2290	0.82	-0.2
2,661,659	+		Psyr_2290	0.82	-0.1
2,661,659	+		Psyr_2290	0.82	-0.7
2,661,660	-		Psyr_2290	0.82	+0.7
2,661,660	-		Psyr_2290	0.82	+0.5
2,661,660	-		Psyr_2290	0.82	+1.3
2,661,660	-		Psyr_2290	0.82	-1.6
2,661,660	-		Psyr_2290	0.82	-0.2
2,661,660	-		Psyr_2290	0.82	+0.3
2,661,867	-				-0.3
2,661,932	+				+0.3
2,662,035	-				+2.1
2,662,070	+				-0.0
2,662,070	+				+0.4
2,662,071	-				+3.1
2,662,073	+				+0.3
2,662,076	+				-0.3
2,662,077	-				+0.1
2,662,091	+				-0.0
2,662,091	+				+1.0
2,662,091	+				-0.7
2,662,091	+				+0.3
2,662,091	+				-0.1
2,662,091	+				+1.4
2,662,091	+				-0.3
2,662,091	+				-1.0
2,662,091	+				+0.3
2,662,092	-				-0.5
2,662,092	-				+0.5
2,662,092	-				+1.0
2,662,092	-				+0.1
2,662,093	+				-1.8
2,662,093	+				+0.8
2,662,093	+				-0.5
2,662,094	-				-0.3
2,662,094	-				+0.7
2,662,144	+				-0.3
2,662,144	+				-0.9
2,662,145	-				+1.1
2,662,145	-				+0.3
2,662,145	-				-0.4
2,662,146	+				+0.0
2,662,147	-				+0.5
2,662,252	+				-0.5
2,662,253	-				+0.6
2,662,253	-				-0.5
2,662,587	+				+2.1
2,662,588	-				+0.0
2,662,610	+				+1.3
2,662,627	-				-0.1
2,662,650	-				+0.1
2,662,759	+				-0.7
2,662,759	+				-0.2
2,662,760	-				-0.4
2,662,797	-				+0.3
2,662,952	+		Psyr_2291	0.19	+1.0
2,662,952	+		Psyr_2291	0.19	+0.6
2,662,952	+		Psyr_2291	0.19	+0.1
2,662,952	+		Psyr_2291	0.19	+1.1
2,662,952	+		Psyr_2291	0.19	+0.4
2,662,953	-		Psyr_2291	0.19	-1.0
2,662,953	-		Psyr_2291	0.19	-0.1
2,662,953	-		Psyr_2291	0.19	-0.5
2,662,956	+		Psyr_2291	0.19	-0.4
2,662,956	+		Psyr_2291	0.19	+0.1
2,662,956	+		Psyr_2291	0.19	-0.3
2,662,956	+		Psyr_2291	0.19	+0.0
2,662,956	+		Psyr_2291	0.19	+1.8
2,662,956	+		Psyr_2291	0.19	+1.6
2,662,956	+		Psyr_2291	0.19	-0.9
2,662,956	+		Psyr_2291	0.19	+0.3
2,662,956	+		Psyr_2291	0.19	-0.2
2,662,956	+		Psyr_2291	0.19	+0.3
2,662,956	+		Psyr_2291	0.19	+2.1
2,662,956	+		Psyr_2291	0.19	-0.8
2,662,957	-		Psyr_2291	0.19	-0.1
2,662,957	-		Psyr_2291	0.19	-0.5
2,662,957	-		Psyr_2291	0.19	+0.9
2,662,957	-		Psyr_2291	0.19	-0.7