Experiment: KB with Flavone 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2255 and Psyr_2256 are separated by 41 nucleotides Psyr_2256 and Psyr_2257 overlap by 7 nucleotides Psyr_2257 and Psyr_2258 overlap by 1 nucleotides Psyr_2258 and Psyr_2259 overlap by 10 nucleotides
Psyr_2255: Psyr_2255 - ABC transporter, at 2,620,055 to 2,620,876
_2255
Psyr_2256: Psyr_2256 - ABC transporter, at 2,620,918 to 2,621,634
_2256
Psyr_2257: Psyr_2257 - Amidohydrolase, at 2,621,628 to 2,622,773
_2257
Psyr_2258: Psyr_2258 - Guanylate kinase/L-type calcium channel region, at 2,622,773 to 2,623,339
_2258
Psyr_2259: Psyr_2259 - Beta-lactamase-like protein, at 2,623,330 to 2,624,082
_2259
Position (kb)
2621
2622
2623 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2620.713 kb on + strand, within Psyr_2255 at 2620.994 kb on + strand, within Psyr_2256 at 2621.098 kb on + strand, within Psyr_2256 at 2621.098 kb on + strand, within Psyr_2256 at 2621.098 kb on + strand, within Psyr_2256 at 2621.098 kb on + strand, within Psyr_2256 at 2621.099 kb on - strand, within Psyr_2256 at 2621.680 kb on + strand at 2622.171 kb on + strand, within Psyr_2257 at 2622.183 kb on + strand, within Psyr_2257 at 2622.183 kb on + strand, within Psyr_2257 at 2622.183 kb on + strand, within Psyr_2257 at 2622.183 kb on + strand, within Psyr_2257 at 2622.184 kb on - strand, within Psyr_2257 at 2622.184 kb on - strand, within Psyr_2257 at 2622.184 kb on - strand, within Psyr_2257 at 2622.184 kb on - strand, within Psyr_2257 at 2622.195 kb on + strand, within Psyr_2257 at 2622.196 kb on - strand, within Psyr_2257 at 2622.543 kb on + strand at 2622.676 kb on + strand at 2622.677 kb on - strand at 2622.677 kb on - strand at 2622.677 kb on - strand at 2622.677 kb on - strand at 2622.677 kb on - strand at 2622.677 kb on - strand at 2622.791 kb on + strand at 2622.791 kb on + strand at 2622.791 kb on + strand at 2622.792 kb on - strand at 2622.792 kb on - strand at 2623.267 kb on + strand, within Psyr_2258 at 2623.378 kb on + strand at 2623.552 kb on + strand, within Psyr_2259
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.125 mg/ml remove 2,620,713 + Psyr_2255 0.80 -1.3 2,620,994 + Psyr_2256 0.11 -0.9 2,621,098 + Psyr_2256 0.25 -0.8 2,621,098 + Psyr_2256 0.25 -0.8 2,621,098 + Psyr_2256 0.25 -0.1 2,621,098 + Psyr_2256 0.25 -1.3 2,621,099 - Psyr_2256 0.25 -0.5 2,621,680 + -0.7 2,622,171 + Psyr_2257 0.47 +0.7 2,622,183 + Psyr_2257 0.48 +1.6 2,622,183 + Psyr_2257 0.48 +0.4 2,622,183 + Psyr_2257 0.48 +1.5 2,622,183 + Psyr_2257 0.48 -1.3 2,622,184 - Psyr_2257 0.49 +1.0 2,622,184 - Psyr_2257 0.49 +0.9 2,622,184 - Psyr_2257 0.49 -0.5 2,622,184 - Psyr_2257 0.49 +0.7 2,622,195 + Psyr_2257 0.49 -0.4 2,622,196 - Psyr_2257 0.50 +1.0 2,622,543 + +2.6 2,622,676 + +0.3 2,622,677 - -0.6 2,622,677 - +0.3 2,622,677 - +0.7 2,622,677 - -0.6 2,622,677 - +3.1 2,622,677 - +0.7 2,622,791 + -0.7 2,622,791 + +1.2 2,622,791 + -0.9 2,622,792 - +1.0 2,622,792 - -0.2 2,623,267 + Psyr_2258 0.87 +1.0 2,623,378 + +1.6 2,623,552 + Psyr_2259 0.29 -1.0
Or see this region's nucleotide sequence