Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0178

Experiment: KB with Flavone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Flavone 0.125 mg/ml
192,668	+		Psyr_0177	0.74	+0.9
192,669	-		Psyr_0177	0.74	-3.0
192,740	+		Psyr_0177	0.76	+0.3
192,740	+		Psyr_0177	0.76	-0.6
192,740	+		Psyr_0177	0.76	-0.5
192,741	-		Psyr_0177	0.76	+1.8
192,741	-		Psyr_0177	0.76	-1.4
192,765	-		Psyr_0177	0.77	+0.0
192,858	-		Psyr_0177	0.80	-0.6
192,887	+		Psyr_0177	0.81	-2.2
192,887	+		Psyr_0177	0.81	+0.1
192,887	+		Psyr_0177	0.81	-0.6
192,887	+		Psyr_0177	0.81	+0.7
192,887	+		Psyr_0177	0.81	-0.3
192,888	-		Psyr_0177	0.81	-0.2
192,888	-		Psyr_0177	0.81	+0.9
192,888	-		Psyr_0177	0.81	-0.4
193,036	+		Psyr_0177	0.86	+1.8
193,053	-		Psyr_0177	0.87	-0.4
193,053	-		Psyr_0177	0.87	+1.5
193,055	+		Psyr_0177	0.87	-0.7
193,055	+		Psyr_0177	0.87	-0.2
193,136	+				+1.3
193,136	+				+1.0
193,136	+				+0.1
193,136	+				+0.8
193,136	+				+0.2
193,143	+				+1.2
193,144	-				+0.0
193,144	-				+0.7
193,144	-				+0.6
193,193	+				-0.3
193,193	+				-0.3
193,194	-				+0.2
193,226	+				+0.8
193,226	+				+0.8
193,226	+				+0.2
193,242	-				-0.9
193,301	+				-0.6
193,301	+				-0.0
193,301	+				+0.6
193,301	+				-0.8
193,301	+				+0.3
193,302	-				+0.3
193,302	-				-0.1
193,302	-				-0.0
193,302	-				-0.4
193,302	-				+1.7
193,554	-				-0.2
193,583	+				-0.7
193,583	+				+0.5
193,583	+				+0.5
193,583	+				+1.3
193,745	+		Psyr_0178	0.47	-0.5
193,745	+		Psyr_0178	0.47	-1.0
193,745	+		Psyr_0178	0.47	-1.2
193,746	-		Psyr_0178	0.48	-0.8
193,918	+		Psyr_0178	0.90	-0.4
193,918	+		Psyr_0178	0.90	-0.1
193,918	+		Psyr_0178	0.90	+0.2
193,919	-				+1.0
193,919	-				+1.2
193,919	-				+0.2
193,919	-				+0.6
193,919	-				-1.4
193,978	+				+0.2
193,978	+				-0.2
193,979	-				+0.6
193,991	+				-0.6
193,991	+				+0.1
193,991	+				-0.0
193,991	+				+0.5
193,992	-				+1.4
193,992	-				+2.6
193,992	-				+0.5
194,058	+				+0.2
194,059	-				+0.7
194,059	-				-1.0
194,071	+				-0.6
194,072	-				+0.1
194,075	+				-0.5
194,075	+				-0.4
194,075	+				+0.1
194,075	+				+1.5
194,075	+				+0.4
194,076	-				+0.2
194,076	-				+1.6
194,076	-				-0.6
194,076	-				-1.3
194,076	-				+0.8
194,076	-				+0.6
194,076	-				+2.0
194,076	-				-0.3
194,076	-				+3.1
194,076	-				+2.0
194,076	-				+0.1
194,258	+		Psyr_0179	0.69	-0.5
194,258	+		Psyr_0179	0.69	+0.4
194,259	-		Psyr_0179	0.70	+1.6
194,449	-		Psyr_0180	0.35	-1.2
194,518	+		Psyr_0180	0.56	+1.2
194,518	+		Psyr_0180	0.56	+1.7
194,518	+		Psyr_0180	0.56	-0.2
194,518	+		Psyr_0180	0.56	-0.5
194,519	-		Psyr_0180	0.56	+1.0
194,519	-		Psyr_0180	0.56	+2.3
194,519	-		Psyr_0180	0.56	+0.6
194,553	-		Psyr_0180	0.66	-0.8
194,600	+		Psyr_0180	0.80	-0.3
194,600	+		Psyr_0180	0.80	-0.5
194,601	-		Psyr_0180	0.80	+1.3
194,601	-		Psyr_0180	0.80	+0.4
194,601	-		Psyr_0180	0.80	-0.7
194,612	-		Psyr_0180	0.84	+0.1
194,694	+				-1.0
194,694	+				+0.3
194,694	+				+0.2
194,694	+				+1.1
194,712	+				-0.2
194,741	+				+0.1
194,741	+				+0.0
194,741	+				+0.3
194,771	-				-0.8
194,771	-				-1.0
194,786	+				+0.4
194,786	+				-0.2
194,786	+				-1.3
194,786	+				-0.3
194,786	+				+0.0
194,787	-				-0.6
194,787	-				-0.9
194,787	-				+2.3
194,787	-				-0.4
194,787	-				-0.1
194,787	-				+2.2
194,787	-				+0.5
194,787	-				+0.6