Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03949

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
1,528,272	+		CCNA_01410	0.44	+0.3
1,528,272	+		CCNA_01410	0.44	-0.4
1,528,273	+		CCNA_01410	0.44	-1.1
1,528,280	+		CCNA_01410	0.44	-2.2
1,528,307	-		CCNA_01410	0.46	-0.8
1,528,329	+		CCNA_01410	0.47	+0.2
1,528,334	+		CCNA_01410	0.48	-0.4
1,528,361	-		CCNA_01410	0.49	+1.4
1,528,379	+		CCNA_01410	0.51	-1.2
1,528,387	-		CCNA_01410	0.51	+3.0
1,528,393	+		CCNA_01410	0.52	-1.0
1,528,396	-		CCNA_01410	0.52	+1.6
1,528,412	+		CCNA_01410	0.53	-0.2
1,528,412	+		CCNA_01410	0.53	+1.4
1,528,412	+		CCNA_01410	0.53	+0.0
1,528,412	+		CCNA_01410	0.53	+0.0
1,528,412	+		CCNA_01410	0.53	-0.2
1,528,412	+		CCNA_01410	0.53	-0.2
1,528,412	+		CCNA_01410	0.53	+0.6
1,528,420	-		CCNA_01410	0.53	+0.3
1,528,420	-		CCNA_01410	0.53	+0.6
1,528,420	-		CCNA_01410	0.53	-0.6
1,528,420	-		CCNA_01410	0.53	-0.1
1,528,420	-		CCNA_01410	0.53	-0.1
1,528,420	-		CCNA_01410	0.53	+1.4
1,528,420	-		CCNA_01410	0.53	+0.0
1,528,420	-		CCNA_01410	0.53	-1.7
1,528,472	+		CCNA_01410	0.57	+0.4
1,528,512	+		CCNA_01410	0.60	+0.5
1,528,527	+		CCNA_01410	0.61	+1.4
1,528,535	-		CCNA_01410	0.61	-1.1
1,528,558	-		CCNA_01410	0.63	-0.2
1,528,590	-		CCNA_01410	0.65	+0.4
1,528,591	-		CCNA_01410	0.65	+1.6
1,528,593	+		CCNA_01410	0.65	-0.0
1,528,670	-		CCNA_01410	0.70	+1.4
1,528,671	-		CCNA_01410	0.70	+0.1
1,528,696	+		CCNA_01410	0.72	+0.6
1,528,704	-		CCNA_01410	0.72	+1.5
1,528,704	-		CCNA_01410	0.72	-0.0
1,528,706	-		CCNA_01410	0.72	-1.9
1,528,715	-		CCNA_01410	0.73	+0.8
1,528,720	+		CCNA_01410	0.73	+0.4
1,528,730	+		CCNA_01410	0.74	-0.6
1,528,730	+		CCNA_01410	0.74	-0.4
1,528,730	+		CCNA_01410	0.74	-0.6
1,528,730	+		CCNA_01410	0.74	-1.0
1,528,730	+		CCNA_01410	0.74	+0.8
1,528,730	+		CCNA_01410	0.74	+0.6
1,528,730	+		CCNA_01410	0.74	+1.0
1,528,730	+		CCNA_01410	0.74	+1.0
1,528,730	+		CCNA_01410	0.74	-0.8
1,528,738	-		CCNA_01410	0.75	-0.2
1,528,738	-		CCNA_01410	0.75	-0.4
1,528,738	-		CCNA_01410	0.75	-1.7
1,528,738	-		CCNA_01410	0.75	-0.2
1,528,746	+		CCNA_01410	0.75	+1.6
1,528,771	-		CCNA_01410	0.77	+1.8
1,528,895	+		CCNA_01410	0.85	+2.0
1,528,902	-		CCNA_01410	0.86	+0.1
1,528,902	-		CCNA_01410	0.86	-0.6
1,528,903	-				+1.8
1,528,903	-		CCNA_01410	0.86	-0.6
1,528,903	-		CCNA_01410	0.86	+0.6
1,528,903	-		CCNA_01410	0.86	+0.8
1,528,938	-		CCNA_01410	0.88	+0.8
1,528,938	-		CCNA_01410	0.88	+0.0
1,528,971	+				+1.4
1,528,979	-				+0.8
1,528,984	-				+1.5
1,529,010	+				-0.8
1,529,070	-				+2.2
1,529,121	-				-0.3
1,529,165	+				+0.4
1,529,165	+				+0.4
1,529,173	-				+1.4
1,529,173	-				+2.3
1,529,173	-				+2.4
1,529,205	-				+1.3
1,529,225	+				+1.0
1,529,271	+				+0.0
1,529,271	+				-1.1
1,529,279	-				+2.4
1,529,289	+				-0.4
1,529,297	-				+1.9
1,529,297	-				+2.7
1,529,299	+		CCNA_03949	0.10	+0.4
1,529,299	+		CCNA_03949	0.10	-0.4
1,529,307	-		CCNA_03949	0.12	+2.0
1,529,380	-		CCNA_03949	0.28	+4.8
1,529,410	-		CCNA_03949	0.34	+2.7
1,529,421	+		CCNA_03949	0.37	+0.0
1,529,429	-		CCNA_03949	0.38	+2.1
1,529,439	+		CCNA_03949	0.41	-0.2
1,529,442	-		CCNA_03949	0.41	+2.0
1,529,468	-		CCNA_03949	0.47	+2.0
1,529,468	-		CCNA_03949	0.47	+1.8
1,529,515	+		CCNA_03949	0.57	+1.4
1,529,517	-		CCNA_03949	0.58	+1.6
1,529,523	-		CCNA_03949	0.59	-0.3
1,529,534	-		CCNA_03949	0.61	+2.4
1,529,534	-		CCNA_03949	0.61	+2.1
1,529,534	-		CCNA_03949	0.61	+1.5
1,529,606	+		CCNA_03949	0.77	+0.8
1,529,606	+		CCNA_03949	0.77	-0.2
1,529,606	+		CCNA_03949	0.77	-0.5
1,529,608	+		CCNA_03949	0.77	+0.0
1,529,608	+		CCNA_03949	0.77	+0.4
1,529,614	-		CCNA_03949	0.79	+1.7
1,529,614	-		CCNA_03949	0.79	+2.2
1,529,616	-		CCNA_03949	0.79	+1.7
1,529,616	-		CCNA_03949	0.79	+2.5
1,529,659	+		CCNA_03949	0.88	+0.4
1,529,659	+		CCNA_03949	0.88	-1.4
1,529,667	-				+1.6
1,529,667	-				+1.8
1,529,667	-				+1.2
1,529,671	-				+2.5
1,529,684	-				+1.8
1,529,695	+				-1.6
1,529,727	+				-1.3
1,529,728	-				+0.9
1,529,756	-				+0.5
1,529,756	-				+0.5
1,529,783	-				+3.6
1,529,783	-				+3.1
1,529,783	-				+3.3
1,529,784	+				-1.9
1,529,786	+				-0.6
1,529,930	-				-1.6
1,529,948	+				+1.3
1,529,953	+				+1.6
1,529,953	+				-0.3
1,529,958	+				+0.8
1,530,014	+				+0.8
1,530,052	-				+0.4
1,530,088	+				+0.1
1,530,114	+		CCNA_01412	0.12	+1.7
1,530,124	+		CCNA_01412	0.13	+3.0
1,530,124	+		CCNA_01412	0.13	+1.1
1,530,193	-		CCNA_01412	0.19	-1.2
1,530,208	+		CCNA_01412	0.20	+1.9
1,530,224	-		CCNA_01412	0.22	-0.8
1,530,231	+		CCNA_01412	0.22	+1.2
1,530,291	+		CCNA_01412	0.28	+1.2
1,530,299	-		CCNA_01412	0.28	-1.0
1,530,316	+		CCNA_01412	0.30	+1.9
1,530,316	+		CCNA_01412	0.30	+2.4
1,530,350	-		CCNA_01412	0.33	+0.8
1,530,368	+		CCNA_01412	0.34	+0.9
1,530,376	-		CCNA_01412	0.35	+0.0
1,530,380	+		CCNA_01412	0.35	+1.8
1,530,388	+		CCNA_01412	0.36	+0.9
1,530,403	+		CCNA_01412	0.37	+3.0
1,530,411	-		CCNA_01412	0.38	-0.1
1,530,422	+		CCNA_01412	0.39	+2.4
1,530,422	+		CCNA_01412	0.39	+1.7
1,530,469	+		CCNA_01412	0.43	+2.3
1,530,469	+		CCNA_01412	0.43	+2.6
1,530,469	+		CCNA_01412	0.43	+2.7
1,530,477	-		CCNA_01412	0.44	+0.8
1,530,505	+		CCNA_01412	0.46	+1.9
1,530,505	+		CCNA_01412	0.46	+1.6
1,530,506	+		CCNA_01412	0.46	+2.7
1,530,513	-		CCNA_01412	0.47	-0.2
1,530,513	-		CCNA_01412	0.47	-1.9
1,530,538	+		CCNA_01412	0.49	+2.1
1,530,538	+		CCNA_01412	0.49	+1.1
1,530,538	-		CCNA_01412	0.49	-0.8
1,530,539	+		CCNA_01412	0.49	+2.3
1,530,545	-		CCNA_01412	0.50	-1.0
1,530,546	-		CCNA_01412	0.50	-0.2
1,530,547	-		CCNA_01412	0.50	+2.4
1,530,548	+		CCNA_01412	0.50	+2.1
1,530,549	+		CCNA_01412	0.50	+1.1
1,530,607	+		CCNA_01412	0.55	+3.4
1,530,615	-		CCNA_01412	0.56	-0.0
1,530,624	+				+2.4
1,530,659	+		CCNA_01412	0.60	+1.9
1,530,665	+		CCNA_01412	0.60	+1.5
1,530,667	-		CCNA_01412	0.60	+0.8
1,530,686	+		CCNA_01412	0.62	+2.1
1,530,691	+		CCNA_01412	0.62	+1.4
1,530,696	+		CCNA_01412	0.63	+3.4
1,530,701	+		CCNA_01412	0.63	+2.1
1,530,701	+		CCNA_01412	0.63	+2.4
1,530,703	+		CCNA_01412	0.64	+2.6
1,530,709	-		CCNA_01412	0.64	+0.0
1,530,709	-		CCNA_01412	0.64	-0.4
1,530,709	-		CCNA_01412	0.64	+0.0