Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03398

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
3,567,903	+		CCNA_03396	0.61	+0.8
3,567,903	+		CCNA_03396	0.61	+3.1
3,567,911	+		CCNA_03396	0.61	+0.5
3,567,914	-		CCNA_03396	0.61	-0.9
3,567,936	+		CCNA_03396	0.63	+1.2
3,567,948	+		CCNA_03396	0.63	+0.8
3,567,956	-		CCNA_03396	0.64	-0.6
3,567,974	+		CCNA_03396	0.65	+0.5
3,567,974	+		CCNA_03396	0.65	+2.5
3,567,984	+		CCNA_03396	0.65	+1.8
3,567,992	-		CCNA_03396	0.66	-0.9
3,568,009	+		CCNA_03396	0.67	+1.0
3,568,076	+		CCNA_03396	0.71	+0.9
3,568,081	+		CCNA_03396	0.71	+2.0
3,568,116	-		CCNA_03396	0.73	+0.8
3,568,126	-		CCNA_03396	0.74	+1.1
3,568,161	-		CCNA_03396	0.76	+1.4
3,568,161	-		CCNA_03396	0.76	-0.2
3,568,176	-		CCNA_03396	0.77	+1.5
3,568,291	+		CCNA_03396	0.83	+1.1
3,568,291	+		CCNA_03396	0.83	-0.1
3,568,291	+		CCNA_03396	0.83	+0.5
3,568,291	+		CCNA_03396	0.83	+0.9
3,568,291	+		CCNA_03396	0.83	+1.0
3,568,291	+		CCNA_03396	0.83	+0.6
3,568,291	+		CCNA_03396	0.83	+0.4
3,568,291	+		CCNA_03396	0.83	-0.3
3,568,291	+		CCNA_03396	0.83	-0.2
3,568,291	+		CCNA_03396	0.83	+0.8
3,568,291	+		CCNA_03396	0.83	+0.0
3,568,291	+		CCNA_03396	0.83	+1.2
3,568,299	-		CCNA_03396	0.84	+0.2
3,568,299	-		CCNA_03396	0.84	-0.5
3,568,299	-		CCNA_03396	0.84	-0.2
3,568,299	-		CCNA_03396	0.84	+0.5
3,568,299	-		CCNA_03396	0.84	-0.9
3,568,310	-		CCNA_03396	0.84	+1.1
3,568,350	-		CCNA_03396	0.87	+0.3
3,568,352	+		CCNA_03396	0.87	+0.9
3,568,356	-		CCNA_03396	0.87	-0.1
3,568,413	+				+1.4
3,568,415	+				+0.5
3,568,423	-				-2.0
3,568,460	+				+1.3
3,568,469	+				+0.5
3,568,470	+				-0.8
3,568,504	+				+0.9
3,568,522	-				+1.1
3,568,522	-				+1.5
3,568,593	-				+1.8
3,568,595	+				-0.7
3,568,595	+				+1.2
3,568,603	-				+0.3
3,568,611	-				+1.3
3,568,679	-		CCNA_03397	0.30	+2.1
3,568,754	+		CCNA_03397	0.62	+1.1
3,568,786	+		CCNA_03397	0.76	+0.1
3,568,824	-				+0.8
3,568,853	+				-0.5
3,568,862	+				+0.5
3,568,862	+				-0.8
3,568,870	-				+2.2
3,568,895	-				-0.0
3,568,902	+				-0.7
3,568,910	-				+1.4
3,568,921	+				-1.1
3,568,921	+				+1.4
3,568,921	+				+0.7
3,568,929	-				-1.2
3,568,929	-				+1.5
3,568,935	+				-0.5
3,568,935	+				+1.1
3,568,935	+				+0.2
3,568,935	+				-1.3
3,568,935	+				-0.4
3,568,935	+				-1.9
3,568,943	-				+1.0
3,568,943	-				+1.6
3,568,943	-				+1.1
3,568,943	-				-1.3
3,568,943	-				-1.1
3,568,943	-				+0.1
3,568,943	-				-0.4
3,568,962	+		CCNA_03398	0.11	-0.2
3,569,004	+		CCNA_03398	0.19	-1.6
3,569,041	-		CCNA_03398	0.26	+0.4
3,569,055	+		CCNA_03398	0.28	+4.7
3,569,094	+		CCNA_03398	0.35	+3.1
3,569,099	-		CCNA_03398	0.36	+1.1
3,569,157	+		CCNA_03398	0.47	-1.6
3,569,157	+		CCNA_03398	0.47	-0.9
3,569,165	-		CCNA_03398	0.48	+1.6
3,569,165	-		CCNA_03398	0.48	+2.7
3,569,165	-		CCNA_03398	0.48	+1.7
3,569,165	-		CCNA_03398	0.48	+0.1
3,569,224	+		CCNA_03398	0.59	-0.2
3,569,232	-		CCNA_03398	0.60	-0.6
3,569,232	-		CCNA_03398	0.60	+0.3
3,569,234	+		CCNA_03398	0.61	-0.8
3,569,237	-		CCNA_03398	0.61	+0.9
3,569,246	+		CCNA_03398	0.63	-0.2
3,569,259	-		CCNA_03398	0.65	+0.1
3,569,259	-		CCNA_03398	0.65	+0.8
3,569,259	-		CCNA_03398	0.65	+1.3
3,569,259	-		CCNA_03398	0.65	+0.5
3,569,259	-		CCNA_03398	0.65	+1.8
3,569,271	+		CCNA_03398	0.67	+0.7
3,569,274	-		CCNA_03398	0.68	+0.6
3,569,278	-		CCNA_03398	0.69	+1.1
3,569,278	-		CCNA_03398	0.69	+1.1
3,569,279	-		CCNA_03398	0.69	+1.0
3,569,346	+		CCNA_03398	0.81	-0.9
3,569,346	+		CCNA_03398	0.81	+2.1
3,569,381	+				-0.9
3,569,382	-				-0.7
3,569,382	-				-0.6
3,569,392	+				+0.1
3,569,402	+				-0.2
3,569,402	+				+1.1
3,569,410	-				+2.2
3,569,410	-				+0.3
3,569,410	-				+0.3
3,569,412	-				+0.6
3,569,418	-				-0.0
3,570,040	-				+0.3
3,570,092	-				+0.7
3,570,107	-				+0.2
3,570,114	+				+1.7
3,570,197	-		CCNA_03400	0.42	+0.8
3,570,221	-		CCNA_03400	0.56	+0.9
3,570,223	+		CCNA_03400	0.57	+1.6
3,570,234	+		CCNA_03400	0.63	+2.1
3,570,350	-				+2.8
3,570,383	-				+2.7
3,570,414	-				+1.1
3,570,427	+				-0.2
3,570,441	-				+0.7
3,570,441	-				+1.2