Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03082

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
3,228,860	+				+1.4
3,228,894	-		CCNA_03884	0.27	+0.8
3,228,904	-		CCNA_03884	0.32	-1.4
3,228,909	+		CCNA_03884	0.35	+1.1
3,228,909	+		CCNA_03884	0.35	+0.1
3,228,909	+		CCNA_03884	0.35	+2.0
3,228,909	+		CCNA_03884	0.35	-0.0
3,228,909	+		CCNA_03884	0.35	+0.2
3,228,909	+		CCNA_03884	0.35	+0.1
3,228,909	+		CCNA_03884	0.35	+0.9
3,228,917	-		CCNA_03884	0.39	+0.7
3,228,917	-		CCNA_03884	0.39	+1.5
3,228,917	-		CCNA_03884	0.39	+1.2
3,228,922	-		CCNA_03884	0.42	+2.4
3,228,928	-		CCNA_03884	0.46	+0.4
3,228,933	+		CCNA_03884	0.48	-0.9
3,228,996	+		CCNA_03884	0.83	-0.2
3,229,034	+				-1.2
3,229,034	+				-0.2
3,229,042	+				-0.3
3,229,067	+				-2.2
3,229,075	-				+1.6
3,229,075	-				+1.8
3,229,109	+		CCNA_03081	0.11	+1.9
3,229,117	-		CCNA_03081	0.13	+1.1
3,229,171	-		CCNA_03081	0.26	+1.4
3,229,208	-		CCNA_03081	0.35	+2.1
3,229,220	+		CCNA_03081	0.38	-0.2
3,229,333	+		CCNA_03081	0.66	-1.1
3,229,369	+		CCNA_03081	0.75	+0.1
3,229,379	+		CCNA_03081	0.77	-1.2
3,229,431	+				+2.0
3,229,441	+				-0.6
3,229,444	-				-1.6
3,229,451	+				+0.1
3,229,451	+				-0.1
3,229,451	+				-1.3
3,229,459	-				-1.7
3,229,459	-				-1.1
3,229,459	-				-0.6
3,229,459	-				-0.6
3,229,459	-				-0.3
3,229,494	-				+0.3
3,229,513	-				+0.5
3,229,542	+				+1.0
3,229,543	-				+1.1
3,229,543	-				-1.6
3,229,545	-				-1.5
3,229,547	+				+1.2
3,229,547	+				+0.6
3,229,555	-				+1.9
3,229,579	+				+1.1
3,229,579	+				+0.7
3,229,610	+				-1.2
3,229,661	+				-0.4
3,229,668	+				+3.0
3,229,668	+				+2.9
3,229,669	-				+0.9
3,229,676	-				+0.2
3,229,704	-				+2.4
3,229,712	+				-0.4
3,229,712	+				+0.4
3,229,712	+				+2.4
3,229,758	+				+1.4
3,229,884	+				+0.8
3,229,892	-				+0.5
3,229,892	-				+2.1
3,229,892	-				-0.6
3,229,911	-				+1.8
3,229,973	+		CCNA_03082	0.17	-2.2
3,229,981	-		CCNA_03082	0.18	+1.8
3,229,981	-		CCNA_03082	0.18	+0.4
3,229,981	-		CCNA_03082	0.18	+0.1
3,229,995	-		CCNA_03082	0.20	+1.3
3,229,997	-		CCNA_03082	0.20	-1.4
3,230,068	-		CCNA_03082	0.30	+1.9
3,230,075	+		CCNA_03082	0.31	+2.0
3,230,110	-		CCNA_03082	0.35	-1.2
3,230,120	+				+0.8
3,230,133	-		CCNA_03082	0.38	+0.5
3,230,142	+		CCNA_03082	0.39	+2.4
3,230,150	-		CCNA_03082	0.41	+0.7
3,230,150	-		CCNA_03082	0.41	+0.2
3,230,150	-		CCNA_03082	0.41	+2.0
3,230,150	-		CCNA_03082	0.41	-0.1
3,230,160	-		CCNA_03082	0.42	-1.6
3,230,165	-		CCNA_03082	0.42	+0.5
3,230,198	+		CCNA_03082	0.47	-0.4
3,230,208	+		CCNA_03082	0.48	+2.4
3,230,208	+		CCNA_03082	0.48	+0.4
3,230,216	-		CCNA_03082	0.49	+1.4
3,230,216	-		CCNA_03082	0.49	+1.1
3,230,218	+		CCNA_03082	0.50	-1.2
3,230,218	+		CCNA_03082	0.50	+0.4
3,230,218	+		CCNA_03082	0.50	-1.4
3,230,223	+		CCNA_03082	0.50	+1.4
3,230,223	+		CCNA_03082	0.50	-0.4
3,230,231	-		CCNA_03082	0.51	+2.4
3,230,256	+		CCNA_03082	0.55	-0.2
3,230,261	+		CCNA_03082	0.55	+0.1
3,230,264	-		CCNA_03082	0.56	+1.3
3,230,264	-		CCNA_03082	0.56	+0.6
3,230,288	-				+3.4
3,230,328	+		CCNA_03082	0.64	-0.5
3,230,336	-		CCNA_03082	0.65	+0.5
3,230,338	+		CCNA_03082	0.65	-0.2
3,230,346	-		CCNA_03082	0.67	-0.7
3,230,354	+		CCNA_03082	0.68	-1.5
3,230,354	+		CCNA_03082	0.68	+0.8
3,230,373	+		CCNA_03082	0.70	+0.1
3,230,397	-		CCNA_03082	0.73	+0.8
3,230,468	+		CCNA_03082	0.83	+2.4
3,230,483	-		CCNA_03082	0.85	+2.4
3,230,580	-				+0.1
3,230,605	-				-1.6
3,230,625	-				-0.8
3,230,641	+				-0.4
3,230,688	-				+2.4
3,230,704	+				-1.4
3,230,704	+				+0.8
3,230,712	-				-1.2
3,230,712	-				-1.1
3,230,712	-				+0.1
3,230,719	+				+0.8
3,230,727	-				+2.4
3,230,768	-				+1.2
3,230,775	+				-0.8
3,230,848	+				-0.8
3,230,861	-				+2.4
3,230,893	-				-0.4
3,230,902	+				+0.9
3,230,927	+				+0.3
3,230,935	-				-0.8
3,230,944	+				-0.7
3,230,958	+				+0.3
3,230,967	+				-0.9
3,230,967	+				+0.8
3,231,010	-				+1.8
3,231,010	-				-0.9
3,231,010	-				-0.2
3,231,063	+				+1.0
3,231,065	+				+0.2
3,231,127	+				+0.4
3,231,132	+				+2.4
3,231,134	-				+2.9
3,231,167	+				+0.7
3,231,167	+				+0.4
3,231,185	+				+0.5
3,231,185	+				+0.1
3,231,185	+				-1.2
3,231,193	-				+1.0
3,231,206	+				-0.5
3,231,243	+				+2.4
3,231,245	+				-0.3
3,231,253	-				-0.9
3,231,258	-				-2.2
3,231,260	+				+0.5
3,231,261	-				+0.1
3,231,327	+				-1.1
3,231,399	-				+0.2
3,231,399	-				+0.2
3,231,401	+				-0.2
3,231,403	+				+1.6
3,231,452	-				-1.0
3,231,462	-				+0.1
3,231,531	+		CCNA_03083	0.12	-0.5
3,231,536	+		CCNA_03083	0.12	+0.4
3,231,541	+		CCNA_03083	0.12	-0.9
3,231,563	-		CCNA_03083	0.14	+1.2
3,231,576	+		CCNA_03083	0.14	+0.0
3,231,577	+		CCNA_03083	0.14	-0.7
3,231,594	-		CCNA_03083	0.15	+0.1
3,231,594	-		CCNA_03083	0.15	+1.0
3,231,594	-		CCNA_03083	0.15	-0.2
3,231,594	-		CCNA_03083	0.15	+0.8
3,231,594	-		CCNA_03083	0.15	-1.0