Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02340

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
2,478,826	-				+0.5
2,478,827	-				+1.9
2,478,851	+				+3.2
2,478,865	+				+0.9
2,478,929	+				-0.5
2,478,962	+		CCNA_02339	0.11	+1.1
2,478,972	-		CCNA_02339	0.12	+4.1
2,478,972	-		CCNA_02339	0.12	+2.7
2,478,987	+		CCNA_02339	0.14	-0.1
2,478,987	+		CCNA_02339	0.14	+1.5
2,478,988	-		CCNA_02339	0.14	+3.6
2,478,995	-		CCNA_02339	0.15	+2.8
2,478,996	-		CCNA_02339	0.15	+2.9
2,479,015	-		CCNA_02339	0.17	+3.4
2,479,017	-		CCNA_02339	0.17	+2.4
2,479,030	+		CCNA_02339	0.19	+1.5
2,479,038	-		CCNA_02339	0.19	+3.3
2,479,055	+		CCNA_02339	0.21	+0.1
2,479,055	+		CCNA_02339	0.21	+0.8
2,479,055	+		CCNA_02339	0.21	-1.9
2,479,063	-		CCNA_02339	0.22	+1.8
2,479,063	-		CCNA_02339	0.22	+3.1
2,479,087	+		CCNA_02339	0.25	+0.9
2,479,087	+		CCNA_02339	0.25	+1.3
2,479,095	-		CCNA_02339	0.26	+3.1
2,479,095	-		CCNA_02339	0.26	+3.1
2,479,095	-		CCNA_02339	0.26	+2.7
2,479,095	-		CCNA_02339	0.26	+3.5
2,479,095	-		CCNA_02339	0.26	+3.2
2,479,095	-		CCNA_02339	0.26	+2.7
2,479,108	-		CCNA_02339	0.27	+3.1
2,479,119	-		CCNA_02339	0.28	+3.2
2,479,134	-		CCNA_02339	0.30	+3.2
2,479,135	+		CCNA_02339	0.30	+2.0
2,479,188	-		CCNA_02339	0.36	+3.3
2,479,188	-		CCNA_02339	0.36	+3.2
2,479,188	-		CCNA_02339	0.36	+3.5
2,479,198	-		CCNA_02339	0.37	+3.9
2,479,198	-		CCNA_02339	0.37	+2.6
2,479,211	-		CCNA_02339	0.39	+2.7
2,479,211	-		CCNA_02339	0.39	+3.0
2,479,212	+		CCNA_02339	0.39	+1.0
2,479,212	-		CCNA_02339	0.39	+3.2
2,479,239	+		CCNA_02339	0.42	+1.3
2,479,247	-		CCNA_02339	0.43	+2.6
2,479,268	+		CCNA_02339	0.45	-0.8
2,479,333	+		CCNA_02339	0.52	+0.7
2,479,333	+		CCNA_02339	0.52	+0.7
2,479,404	-		CCNA_02339	0.60	+3.1
2,479,434	-		CCNA_02339	0.64	+3.3
2,479,447	-		CCNA_02339	0.65	+3.4
2,479,453	+		CCNA_02339	0.66	-0.0
2,479,479	+		CCNA_02339	0.69	+1.1
2,479,484	+		CCNA_02339	0.69	+1.9
2,479,487	-		CCNA_02339	0.69	+3.1
2,479,563	-		CCNA_02339	0.78	+3.2
2,479,638	-		CCNA_02339	0.86	+3.1
2,479,648	+		CCNA_02339	0.87	+0.7
2,479,648	+		CCNA_02339	0.87	+1.3
2,479,653	+				+2.3
2,479,656	-		CCNA_02339	0.88	+3.0
2,479,661	-		CCNA_02339	0.89	+3.1
2,479,700	-				+3.7
2,479,718	+				-0.0
2,479,726	-				+3.1
2,479,733	-				+3.4
2,479,768	-				+0.2
2,479,768	-				+1.5
2,479,794	-				+2.8
2,479,854	+				-0.3
2,479,862	-				+1.2
2,479,951	+		CCNA_02340	0.17	+0.9
2,479,956	-		CCNA_02340	0.18	+2.1
2,479,967	-		CCNA_02340	0.19	+1.8
2,479,967	-		CCNA_02340	0.19	+2.3
2,479,971	+		CCNA_02340	0.20	-0.4
2,480,004	-		CCNA_02340	0.24	+2.6
2,480,044	+		CCNA_02340	0.28	-1.3
2,480,045	-		CCNA_02340	0.28	+2.1
2,480,051	-		CCNA_02340	0.29	+1.4
2,480,088	-		CCNA_02340	0.34	+1.5
2,480,120	-		CCNA_02340	0.37	+1.3
2,480,130	+		CCNA_02340	0.39	+0.3
2,480,130	+		CCNA_02340	0.39	-0.2
2,480,138	-		CCNA_02340	0.40	+1.5
2,480,160	+		CCNA_02340	0.42	-0.9
2,480,180	+		CCNA_02340	0.44	-0.2
2,480,180	+		CCNA_02340	0.44	+1.3
2,480,188	-		CCNA_02340	0.45	+2.3
2,480,222	-		CCNA_02340	0.49	+1.3
2,480,222	-		CCNA_02340	0.49	+1.7
2,480,246	-		CCNA_02340	0.52	+2.1
2,480,281	-		CCNA_02340	0.56	+1.4
2,480,317	-		CCNA_02340	0.61	+1.1
2,480,331	+		CCNA_02340	0.62	-0.3
2,480,339	-		CCNA_02340	0.63	+2.3
2,480,341	+		CCNA_02340	0.64	-1.2
2,480,349	-		CCNA_02340	0.65	+2.3
2,480,396	+		CCNA_02340	0.70	-1.3
2,480,471	-		CCNA_02340	0.79	+1.3
2,480,556	+		CCNA_02340	0.89	-1.5
2,480,558	+		CCNA_02340	0.89	-0.7
2,480,558	+		CCNA_02340	0.89	-0.9
2,480,558	+		CCNA_02340	0.89	-0.0
2,480,566	-				+1.9
2,480,566	-				+1.3
2,480,566	-				+0.5
2,480,566	-				+0.1
2,480,610	-				+2.9
2,480,636	+				+0.3
2,480,652	-				-0.9
2,480,668	+				+0.0
2,480,668	+				+0.7
2,480,736	+				-1.4
2,480,736	+				-0.3
2,480,765	-				+0.7
2,480,769	-				-0.0
2,480,810	-				+0.3
2,480,816	+				+1.1
2,480,868	+				+2.5
2,480,876	-				-1.9
2,480,876	-				-0.5
2,480,900	+				+2.3
2,480,900	+				+2.5
2,480,900	+				+1.3
2,480,922	+				+2.5
2,480,922	+				+1.7
2,480,957	+		CCNA_02341	0.17	+2.9
2,480,972	+		CCNA_02341	0.20	+2.8
2,481,046	+		CCNA_02341	0.36	+2.2
2,481,067	-		CCNA_02341	0.41	+1.3
2,481,123	+		CCNA_02341	0.53	+2.8
2,481,125	+		CCNA_02341	0.54	+2.0
2,481,174	+		CCNA_02341	0.64	+2.4
2,481,192	+		CCNA_02341	0.68	+2.5
2,481,192	+		CCNA_02341	0.68	+2.7
2,481,200	-		CCNA_02341	0.70	+1.3
2,481,284	-		CCNA_02341	0.88	+1.2
2,481,316	-				-0.7
2,481,345	-				+0.7
2,481,352	-				+0.6
2,481,370	+				+2.8
2,481,433	+				-1.9
2,481,440	+				+0.3
2,481,449	-				+2.9
2,481,455	+				-1.3
2,481,476	+				-1.4
2,481,484	-				+2.3
2,481,485	-				+2.6
2,481,495	-				+1.2
2,481,501	-				+2.4
2,481,503	-				+2.4
2,481,510	-				+1.1
2,481,510	-				+2.4
2,481,534	-				+2.2
2,481,537	+				-1.4
2,481,555	+		CCNA_02342	0.11	+1.1
2,481,587	+		CCNA_02342	0.14	+0.7