Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01680

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
1,806,561	+		CCNA_01679	0.34	+2.5
1,806,563	+		CCNA_01679	0.34	+2.1
1,806,563	+		CCNA_01679	0.34	+2.2
1,806,571	-		CCNA_01679	0.35	-0.1
1,806,612	+		CCNA_01679	0.38	+1.9
1,806,649	+		CCNA_01679	0.40	+2.5
1,806,652	-		CCNA_01679	0.41	+1.9
1,806,705	+		CCNA_01679	0.44	+2.1
1,806,792	-		CCNA_01679	0.50	+0.1
1,807,013	+		CCNA_01679	0.65	+1.9
1,807,054	+		CCNA_01679	0.68	+1.9
1,807,113	+		CCNA_01679	0.72	+1.5
1,807,113	+		CCNA_01679	0.72	+1.9
1,807,113	+		CCNA_01679	0.72	+2.8
1,807,113	+		CCNA_01679	0.72	+2.6
1,807,113	+		CCNA_01679	0.72	+2.3
1,807,121	-		CCNA_01679	0.73	-0.4
1,807,121	-		CCNA_01679	0.73	+2.1
1,807,121	-		CCNA_01679	0.73	+0.5
1,807,158	+		CCNA_01679	0.75	+3.3
1,807,369	+		CCNA_01679	0.90	+2.1
1,807,369	+		CCNA_01679	0.90	+1.3
1,807,369	+		CCNA_01679	0.90	+2.8
1,807,377	-				+1.5
1,807,377	-				+1.4
1,807,377	-				+2.2
1,807,386	+				+0.2
1,807,397	-				+1.5
1,807,442	-				+0.4
1,807,539	+				+2.5
1,807,549	+				+1.7
1,807,549	+				+1.9
1,807,549	+				+2.6
1,807,549	+				+2.2
1,807,557	-				+2.1
1,807,564	+				+2.7
1,807,564	+				+2.1
1,807,564	+				+2.2
1,807,572	-				-0.9
1,807,572	-				-0.3
1,807,572	-				+1.1
1,807,628	-				+0.8
1,807,676	+		CCNA_01680	0.12	+2.5
1,807,676	+		CCNA_01680	0.12	+2.5
1,807,695	-		CCNA_01680	0.13	+1.5
1,807,721	+		CCNA_01680	0.15	+1.9
1,807,769	+		CCNA_01680	0.19	+2.0
1,807,834	-		CCNA_01680	0.24	+0.5
1,807,909	+		CCNA_01680	0.29	+1.9
1,807,932	+		CCNA_01680	0.31	+2.1
1,807,932	+		CCNA_01680	0.31	+2.4
1,807,932	+		CCNA_01680	0.31	+1.8
1,807,977	-		CCNA_01680	0.35	+0.2
1,808,038	+		CCNA_01680	0.39	+1.5
1,808,059	+		CCNA_01680	0.41	+1.4
1,808,059	+		CCNA_01680	0.41	+1.2
1,808,059	+		CCNA_01680	0.41	+3.8
1,808,113	+		CCNA_01680	0.45	+2.4
1,808,251	+		CCNA_01680	0.55	+2.0
1,808,265	+		CCNA_01680	0.56	+2.1
1,808,271	+		CCNA_01680	0.56	+2.7
1,808,314	-		CCNA_01680	0.60	-1.3
1,808,335	+		CCNA_01680	0.61	+2.1
1,808,359	+		CCNA_01680	0.63	+1.8
1,808,368	+		CCNA_01680	0.64	+2.3
1,808,398	+		CCNA_01680	0.66	+2.5
1,808,466	+		CCNA_01680	0.71	+1.6
1,808,479	-		CCNA_01680	0.72	-1.1
1,808,530	+		CCNA_01680	0.76	+1.8
1,808,537	+		CCNA_01680	0.76	+2.2
1,808,549	+		CCNA_01680	0.77	+3.8
1,808,625	+		CCNA_01680	0.83	+1.6
1,808,638	-		CCNA_01680	0.84	+1.3
1,808,682	-		CCNA_01680	0.87	-0.8
1,808,741	-				-0.9
1,808,755	-				-1.3
1,808,764	+				+1.7
1,808,800	+				+3.7
1,808,827	+				+1.7
1,808,827	+				+2.5
1,808,827	+				+3.1
1,808,834	-				+0.3
1,808,835	-				-0.2
1,808,835	-				+1.1
1,808,902	+		CCNA_01681	0.10	+3.1
1,808,913	-		CCNA_01681	0.12	+0.2
1,808,935	+		CCNA_01681	0.17	+1.8
1,808,950	+		CCNA_01681	0.20	+0.8
1,809,072	+		CCNA_01681	0.44	-0.5
1,809,110	+		CCNA_01681	0.51	+1.8
1,809,137	+		CCNA_01681	0.56	+2.9
1,809,137	+		CCNA_01681	0.56	+0.1
1,809,223	-		CCNA_01681	0.73	+0.9
1,809,250	+		CCNA_01681	0.79	+1.5
1,809,381	+				+1.6
1,809,456	+		CCNA_01682	0.11	+0.5
1,809,463	+		CCNA_01682	0.12	+1.5
1,809,488	+		CCNA_01682	0.14	+1.1
1,809,492	+		CCNA_01682	0.15	+0.2
1,809,513	+		CCNA_01682	0.17	+0.3
1,809,521	-		CCNA_01682	0.18	+0.7
1,809,521	-		CCNA_01682	0.18	-0.8
1,809,521	-		CCNA_01682	0.18	-0.7
1,809,521	-		CCNA_01682	0.18	-1.3
1,809,625	+		CCNA_01682	0.29	+1.0
1,809,625	+		CCNA_01682	0.29	+0.4
1,809,625	+		CCNA_01682	0.29	+1.6
1,809,635	+		CCNA_01682	0.30	+0.9
1,809,635	-		CCNA_01682	0.30	+1.4
1,809,660	+		CCNA_01682	0.33	+2.5
1,809,668	-		CCNA_01682	0.33	+1.2
1,809,677	-		CCNA_01682	0.34	-0.3