Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01575

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
1,689,984	-		CCNA_01573	0.62	+3.6
1,689,984	-		CCNA_01573	0.62	+3.5
1,689,999	-		CCNA_01573	0.66	+2.4
1,690,013	-		CCNA_01573	0.70	+2.8
1,690,018	-		CCNA_01573	0.71	+3.7
1,690,038	-		CCNA_01573	0.77	+3.2
1,690,070	+		CCNA_01573	0.86	+0.6
1,690,077	+		CCNA_01573	0.88	-0.4
1,690,077	+		CCNA_01573	0.88	+0.3
1,690,100	-				+2.2
1,690,262	+		CCNA_01574	0.12	-1.2
1,690,277	+		CCNA_01574	0.14	-0.4
1,690,341	-		CCNA_01574	0.23	-1.9
1,690,344	+		CCNA_01574	0.23	-1.2
1,690,366	+		CCNA_01574	0.26	+0.1
1,690,374	-		CCNA_01574	0.27	-1.5
1,690,405	+		CCNA_01574	0.32	-0.4
1,690,413	-		CCNA_01574	0.33	-1.9
1,690,415	+		CCNA_01574	0.33	-1.1
1,690,422	+		CCNA_01574	0.34	+0.6
1,690,442	+		CCNA_01574	0.37	+1.2
1,690,458	+		CCNA_01574	0.39	+0.6
1,690,463	+		CCNA_01574	0.39	-0.2
1,690,463	+		CCNA_01574	0.39	+1.0
1,690,471	-		CCNA_01574	0.41	+0.3
1,690,471	-		CCNA_01574	0.41	-0.5
1,690,474	+		CCNA_01574	0.41	-0.1
1,690,474	+		CCNA_01574	0.41	+1.0
1,690,562	+		CCNA_01574	0.53	+0.3
1,690,570	-		CCNA_01574	0.54	+0.4
1,690,570	-		CCNA_01574	0.54	-1.2
1,690,570	-		CCNA_01574	0.54	-0.4
1,690,570	-		CCNA_01574	0.54	-1.0
1,690,589	-		CCNA_01574	0.57	-1.4
1,690,594	-		CCNA_01574	0.57	-0.6
1,690,597	+		CCNA_01574	0.58	+1.3
1,690,615	-		CCNA_01574	0.60	+3.6
1,690,617	+		CCNA_01574	0.60	-0.4
1,690,617	+		CCNA_01574	0.60	-0.9
1,690,632	+		CCNA_01574	0.62	+1.6
1,690,844	-				+1.4
1,690,849	+				+1.0
1,690,886	+				+1.0
1,690,886	+				-0.5
1,690,886	+				+1.1
1,690,894	-				+0.5
1,690,947	+				+1.1
1,690,960	-				+3.0
1,690,978	+				-1.3
1,690,984	+				+1.0
1,690,992	-				+2.3
1,690,992	-				+2.6
1,691,021	-				+2.8
1,691,026	-				+3.0
1,691,082	-				+2.7
1,691,112	+		CCNA_01575	0.12	-1.2
1,691,176	+		CCNA_01575	0.17	+1.3
1,691,176	+		CCNA_01575	0.17	+1.0
1,691,177	-		CCNA_01575	0.17	+1.1
1,691,177	-		CCNA_01575	0.17	+2.3
1,691,184	-		CCNA_01575	0.18	+2.7
1,691,235	+		CCNA_01575	0.22	-1.8
1,691,235	+		CCNA_01575	0.22	+0.4
1,691,243	-		CCNA_01575	0.22	+2.9
1,691,249	+		CCNA_01575	0.23	-0.1
1,691,257	+		CCNA_01575	0.24	-1.3
1,691,257	-		CCNA_01575	0.24	+1.5
1,691,257	-		CCNA_01575	0.24	+0.9
1,691,257	-		CCNA_01575	0.24	+1.7
1,691,270	-		CCNA_01575	0.25	+1.7
1,691,293	+		CCNA_01575	0.26	+0.8
1,691,324	-		CCNA_01575	0.29	+2.2
1,691,329	+		CCNA_01575	0.29	+1.0
1,691,337	-		CCNA_01575	0.30	+2.2
1,691,390	-				+1.6
1,691,390	-		CCNA_01575	0.34	+1.8
1,691,392	-		CCNA_01575	0.35	+1.9
1,691,411	-		CCNA_01575	0.36	+1.6
1,691,439	-		CCNA_01575	0.38	+4.6
1,691,497	-		CCNA_01575	0.43	+2.9
1,691,509	-		CCNA_01575	0.44	+2.5
1,691,529	-		CCNA_01575	0.46	+0.5
1,691,538	-		CCNA_01575	0.46	+0.3
1,691,538	-		CCNA_01575	0.46	+2.4
1,691,538	-		CCNA_01575	0.46	-0.0
1,691,538	-		CCNA_01575	0.46	+0.9
1,691,559	+		CCNA_01575	0.48	+1.5
1,691,560	+		CCNA_01575	0.48	+1.0
1,691,578	+		CCNA_01575	0.50	-0.2
1,691,601	+		CCNA_01575	0.52	-0.7
1,691,622	+		CCNA_01575	0.53	-1.2
1,691,630	-		CCNA_01575	0.54	+1.4
1,691,630	-		CCNA_01575	0.54	+2.0
1,691,630	-		CCNA_01575	0.54	+2.2
1,691,630	-		CCNA_01575	0.54	+1.9
1,691,653	+		CCNA_01575	0.56	-0.0
1,691,758	+		CCNA_01575	0.64	-0.6
1,691,768	-		CCNA_01575	0.65	+1.7
1,691,776	-		CCNA_01575	0.66	+1.6
1,691,803	+		CCNA_01575	0.68	-1.4
1,691,807	+		CCNA_01575	0.68	-1.4
1,691,824	+		CCNA_01575	0.70	+0.6
1,691,843	-		CCNA_01575	0.71	+1.1
1,691,846	-		CCNA_01575	0.72	+2.2
1,691,908	+		CCNA_01575	0.77	+0.3
1,691,916	-		CCNA_01575	0.77	+1.3
1,691,986	-		CCNA_01575	0.83	+1.9
1,691,986	-		CCNA_01575	0.83	+1.3
1,691,986	-		CCNA_01575	0.83	+1.1
1,691,999	-		CCNA_01575	0.84	+1.6
1,692,006	-		CCNA_01575	0.85	+2.3
1,692,050	-		CCNA_01575	0.88	+1.0
1,692,050	-		CCNA_01575	0.88	+0.7
1,692,098	-				+1.3
1,692,134	+				+1.6
1,692,164	+				-0.7
1,692,177	+				+0.7
1,692,177	+				-0.4
1,692,177	+				+1.6
1,692,177	+				+0.7
1,692,179	+				+0.7
1,692,184	+				-1.1
1,692,185	-				+0.8
1,692,196	+				+2.3
1,692,196	+				-1.2
1,692,196	+				-0.8
1,692,196	+				+0.7
1,692,204	-				-0.7
1,692,212	+				+0.3
1,692,220	-				+0.6
1,692,232	-				+3.1
1,692,233	+				+0.9
1,692,233	+				-1.2
1,692,233	+				+1.2
1,692,233	+				-0.7
1,692,272	+				+2.6
1,692,307	+				-0.0
1,692,323	+				+2.0
1,692,353	+				+2.1
1,692,368	+				-0.0
1,692,406	-				+1.1
1,692,417	+				-0.6
1,692,417	+				+0.3
1,692,425	-				+0.3
1,692,480	-		CCNA_01576	0.13	+0.1
1,692,496	-		CCNA_01576	0.14	-1.7
1,692,505	-		CCNA_01576	0.15	+0.5
1,692,515	-		CCNA_01576	0.16	+1.2
1,692,521	-		CCNA_01576	0.16	-0.6
1,692,528	-		CCNA_01576	0.17	-0.7
1,692,528	-		CCNA_01576	0.17	-0.3
1,692,528	-		CCNA_01576	0.17	+1.2
1,692,532	+		CCNA_01576	0.17	-0.0
1,692,532	+		CCNA_01576	0.17	-1.4
1,692,532	+		CCNA_01576	0.17	-0.2
1,692,532	+		CCNA_01576	0.17	+0.3
1,692,532	+		CCNA_01576	0.17	-0.7
1,692,532	+		CCNA_01576	0.17	+2.6
1,692,532	+		CCNA_01576	0.17	+1.9
1,692,532	+		CCNA_01576	0.17	+1.0
1,692,532	+		CCNA_01576	0.17	+0.3
1,692,532	+		CCNA_01576	0.17	+1.0
1,692,532	+		CCNA_01576	0.17	-1.0
1,692,532	+		CCNA_01576	0.17	+2.6
1,692,532	+		CCNA_01576	0.17	+1.0
1,692,532	+		CCNA_01576	0.17	+1.6
1,692,532	+		CCNA_01576	0.17	-0.2
1,692,532	+		CCNA_01576	0.17	-1.0
1,692,532	+		CCNA_01576	0.17	-0.4
1,692,532	+		CCNA_01576	0.17	-1.4
1,692,532	+		CCNA_01576	0.17	+1.6
1,692,533	-		CCNA_01576	0.17	+0.6
1,692,540	-		CCNA_01576	0.18	+0.1
1,692,540	-		CCNA_01576	0.18	+0.3
1,692,540	-		CCNA_01576	0.18	-0.7
1,692,540	-		CCNA_01576	0.18	+0.1
1,692,540	-		CCNA_01576	0.18	-0.7
1,692,540	-		CCNA_01576	0.18	-0.2
1,692,540	-		CCNA_01576	0.18	+0.3
1,692,540	-		CCNA_01576	0.18	+0.7
1,692,540	-		CCNA_01576	0.18	-0.0
1,692,540	-		CCNA_01576	0.18	+1.0
1,692,540	-		CCNA_01576	0.18	+0.6
1,692,540	-		CCNA_01576	0.18	+1.5
1,692,540	-		CCNA_01576	0.18	-0.2
1,692,540	-		CCNA_01576	0.18	+0.3
1,692,540	-		CCNA_01576	0.18	+0.8
1,692,540	-		CCNA_01576	0.18	+0.8
1,692,540	-		CCNA_01576	0.18	+1.4
1,692,540	-		CCNA_01576	0.18	-1.3
1,692,540	-		CCNA_01576	0.18	-1.2
1,692,540	-		CCNA_01576	0.18	+2.1
1,692,540	-		CCNA_01576	0.18	-0.2
1,692,540	-		CCNA_01576	0.18	+0.4
1,692,540	-		CCNA_01576	0.18	+2.6
1,692,540	-		CCNA_01576	0.18	-0.8
1,692,540	-		CCNA_01576	0.18	+0.3
1,692,540	-		CCNA_01576	0.18	+0.9
1,692,540	-		CCNA_01576	0.18	+0.4
1,692,540	-		CCNA_01576	0.18	+1.6
1,692,540	-		CCNA_01576	0.18	+0.9
1,692,540	-		CCNA_01576	0.18	-0.9
1,692,540	-		CCNA_01576	0.18	+1.2
1,692,540	-		CCNA_01576	0.18	-0.3
1,692,552	+		CCNA_01576	0.19	+0.3
1,692,552	+		CCNA_01576	0.19	+1.2
1,692,552	+		CCNA_01576	0.19	+1.0
1,692,557	+		CCNA_01576	0.19	-0.0
1,692,560	-		CCNA_01576	0.19	+0.3
1,692,560	-		CCNA_01576	0.19	+0.9
1,692,560	-		CCNA_01576	0.19	-0.3
1,692,560	-		CCNA_01576	0.19	+1.6
1,692,582	+		CCNA_01576	0.21	+1.0
1,692,646	+		CCNA_01576	0.26	+0.3
1,692,654	-		CCNA_01576	0.27	+0.6
1,692,654	-		CCNA_01576	0.27	+0.6
1,692,686	-		CCNA_01576	0.29	-0.2
1,692,731	-		CCNA_01576	0.33	+1.0
1,692,752	-		CCNA_01576	0.34	-1.5
1,692,781	+		CCNA_01576	0.36	+1.6
1,692,789	+		CCNA_01576	0.37	-0.1
1,692,789	+		CCNA_01576	0.37	+0.3
1,692,789	-		CCNA_01576	0.37	+1.7
1,692,789	-		CCNA_01576	0.37	+2.5
1,692,796	+		CCNA_01576	0.38	-1.1
1,692,797	-		CCNA_01576	0.38	-0.4
1,692,836	-		CCNA_01576	0.41	+2.0
1,692,874	+		CCNA_01576	0.44	-1.5
1,692,874	+		CCNA_01576	0.44	+1.0
1,692,909	+		CCNA_01576	0.46	-1.4
1,692,937	+		CCNA_01576	0.48	+0.6
1,692,945	-		CCNA_01576	0.49	-0.7
1,692,957	+		CCNA_01576	0.50	+0.3
1,692,995	+		CCNA_01576	0.53	+0.6
1,693,008	-		CCNA_01576	0.54	-0.6
1,693,029	+		CCNA_01576	0.56	-1.0
1,693,029	+		CCNA_01576	0.56	-2.3
1,693,037	-		CCNA_01576	0.56	+0.6
1,693,037	-		CCNA_01576	0.56	-1.3
1,693,037	-		CCNA_01576	0.56	+0.2
1,693,037	-		CCNA_01576	0.56	+0.6
1,693,037	-		CCNA_01576	0.56	+0.3
1,693,042	-		CCNA_01576	0.57	-0.2
1,693,042	-		CCNA_01576	0.57	-0.6
1,693,071	+		CCNA_01576	0.59	-0.7
1,693,072	+		CCNA_01576	0.59	+1.6
1,693,080	-		CCNA_01576	0.59	-0.4
1,693,080	-		CCNA_01576	0.59	+1.8
1,693,080	-		CCNA_01576	0.59	-1.8
1,693,080	-		CCNA_01576	0.59	+2.5
1,693,085	-		CCNA_01576	0.60	+2.0