Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00943

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
1,018,410	+				+1.3
1,018,431	+				+0.7
1,018,434	-				+1.0
1,018,438	+				-1.1
1,018,439	-				-0.3
1,018,475	+				-0.0
1,018,481	-				-0.3
1,018,515	-				+0.9
1,018,525	+		CCNA_00942	0.10	+0.5
1,018,530	+		CCNA_00942	0.11	-0.3
1,018,640	-		CCNA_00942	0.23	+1.2
1,018,659	+		CCNA_00942	0.25	+2.3
1,018,679	-		CCNA_00942	0.27	+0.7
1,018,685	+		CCNA_00942	0.28	+2.2
1,018,707	-		CCNA_00942	0.30	+1.3
1,018,750	+		CCNA_00942	0.35	-0.4
1,018,750	+		CCNA_00942	0.35	-2.9
1,018,750	+		CCNA_00942	0.35	-1.0
1,018,755	+		CCNA_00942	0.35	-2.0
1,018,755	+		CCNA_00942	0.35	+0.7
1,018,756	+		CCNA_00942	0.35	+0.5
1,018,763	-		CCNA_00942	0.36	+1.5
1,018,764	-		CCNA_00942	0.36	+1.1
1,018,794	-		CCNA_00942	0.40	+0.8
1,018,804	-		CCNA_00942	0.41	-0.4
1,018,827	+		CCNA_00942	0.43	+1.3
1,018,852	+		CCNA_00942	0.46	-0.5
1,018,852	+		CCNA_00942	0.46	-1.6
1,018,867	+		CCNA_00942	0.48	-1.3
1,018,867	+		CCNA_00942	0.48	-1.7
1,018,867	+		CCNA_00942	0.48	+0.1
1,018,875	-		CCNA_00942	0.48	-0.5
1,018,936	+		CCNA_00942	0.55	-0.0
1,018,944	-		CCNA_00942	0.56	-0.0
1,018,946	+		CCNA_00942	0.56	-1.3
1,018,949	-		CCNA_00942	0.56	+2.3
1,018,954	-		CCNA_00942	0.57	+1.7
1,018,959	+		CCNA_00942	0.57	+0.3
1,018,960	+		CCNA_00942	0.58	+0.1
1,018,967	-		CCNA_00942	0.58	-0.9
1,018,969	+		CCNA_00942	0.59	-0.9
1,018,969	-		CCNA_00942	0.59	+0.8
1,019,000	-		CCNA_00942	0.62	-0.3
1,019,091	-		CCNA_00942	0.72	-0.8
1,019,126	-		CCNA_00942	0.76	+0.6
1,019,146	+		CCNA_00942	0.78	-0.3
1,019,151	+		CCNA_00942	0.78	-1.4
1,019,154	-		CCNA_00942	0.79	-1.6
1,019,154	-		CCNA_00942	0.79	+1.0
1,019,173	+		CCNA_00942	0.81	-0.7
1,019,175	-		CCNA_00942	0.81	-0.8
1,019,175	-		CCNA_00942	0.81	+0.1
1,019,178	+		CCNA_00942	0.81	-1.0
1,019,181	-		CCNA_00942	0.81	+2.3
1,019,186	-		CCNA_00942	0.82	+2.1
1,019,198	-		CCNA_00942	0.83	+0.2
1,019,207	-		CCNA_00942	0.84	-1.2
1,019,224	-		CCNA_00942	0.86	-0.1
1,019,234	+		CCNA_00942	0.87	-0.3
1,019,242	-		CCNA_00942	0.88	-0.1
1,019,269	-				+1.1
1,019,272	+				+0.3
1,019,310	+				+2.3
1,019,310	-				+0.3
1,019,311	-				-0.3
1,019,328	-				+0.5
1,019,328	-				-0.9
1,019,333	-				+0.2
1,019,333	-				+1.9
1,019,343	-				+1.8
1,019,343	-				+0.8
1,019,346	+				-1.8
1,019,346	+				+1.1
1,019,346	+				+0.3
1,019,346	+				+0.1
1,019,354	-				+0.7
1,019,354	-				-1.5
1,019,358	+				+1.7
1,019,358	+				+1.7
1,019,361	-				-0.7
1,019,386	-				+1.1
1,019,386	-				-1.3
1,019,388	+				+1.7
1,019,398	+				-0.4
1,019,411	-				+1.7
1,019,418	+				-0.0
1,019,421	+				+1.3
1,019,421	+				-1.7
1,019,429	-				+2.3
1,019,477	-				+1.1
1,019,487	-				+1.8
1,019,489	+				+1.7
1,019,493	-				+2.3
1,019,497	-				+1.6
1,019,506	+				+0.3
1,019,514	-				+1.5
1,019,514	-				-1.0
1,019,532	-				+2.6
1,019,580	-		CCNA_00943	0.11	+2.3
1,019,608	-		CCNA_00943	0.12	+1.8
1,019,649	+		CCNA_00943	0.14	+1.3
1,019,659	+		CCNA_00943	0.14	-1.0
1,019,664	+		CCNA_00943	0.15	-1.2
1,019,664	+		CCNA_00943	0.15	+1.7
1,019,669	+		CCNA_00943	0.15	-0.0
1,019,670	+				+0.7
1,019,670	+		CCNA_00943	0.15	+0.1
1,019,672	-		CCNA_00943	0.15	+1.6
1,019,672	-		CCNA_00943	0.15	+1.7
1,019,672	-		CCNA_00943	0.15	+1.7
1,019,673	-		CCNA_00943	0.15	+2.1
1,019,677	-		CCNA_00943	0.15	+2.5
1,019,677	-		CCNA_00943	0.15	+1.3
1,019,727	+		CCNA_00943	0.18	-1.0
1,019,740	-		CCNA_00943	0.18	+2.5
1,019,755	+		CCNA_00943	0.19	-0.3
1,019,763	+		CCNA_00943	0.19	+0.7
1,019,763	+		CCNA_00943	0.19	-0.9
1,019,811	+		CCNA_00943	0.22	-1.5
1,019,827	+		CCNA_00943	0.22	-0.5
1,019,872	+		CCNA_00943	0.24	+1.3
1,019,923	+		CCNA_00943	0.27	-0.4
1,019,926	-		CCNA_00943	0.27	+0.4
1,019,926	-		CCNA_00943	0.27	+1.7
1,019,931	-		CCNA_00943	0.27	+1.5
1,019,980	-		CCNA_00943	0.30	+1.3
1,020,023	-		CCNA_00943	0.32	+1.0
1,020,035	-		CCNA_00943	0.32	+2.1
1,020,040	-		CCNA_00943	0.32	+1.2
1,020,067	+		CCNA_00943	0.34	-2.0
1,020,118	+		CCNA_00943	0.36	-0.9
1,020,123	+		CCNA_00943	0.36	-0.2
1,020,123	+		CCNA_00943	0.36	-0.3
1,020,123	+		CCNA_00943	0.36	-1.0
1,020,131	-		CCNA_00943	0.37	+2.2
1,020,131	-		CCNA_00943	0.37	+2.3
1,020,131	-		CCNA_00943	0.37	+2.5
1,020,189	+		CCNA_00943	0.39	+0.4
1,020,213	+		CCNA_00943	0.41	+0.7
1,020,245	+		CCNA_00943	0.42	+0.9
1,020,245	+		CCNA_00943	0.42	-0.4
1,020,253	-		CCNA_00943	0.43	+2.9
1,020,319	+		CCNA_00943	0.46	-0.5
1,020,319	+		CCNA_00943	0.46	-0.8
1,020,319	+		CCNA_00943	0.46	-1.7
1,020,319	+		CCNA_00943	0.46	-0.5
1,020,324	-		CCNA_00943	0.46	+1.6
1,020,327	-		CCNA_00943	0.46	+0.3
1,020,327	-		CCNA_00943	0.46	+1.2
1,020,329	-		CCNA_00943	0.46	+1.4
1,020,331	+		CCNA_00943	0.46	+0.3
1,020,348	+		CCNA_00943	0.47	-0.7
1,020,356	-		CCNA_00943	0.47	+1.5
1,020,356	-		CCNA_00943	0.47	+3.3
1,020,356	-		CCNA_00943	0.47	+1.2
1,020,379	+		CCNA_00943	0.48	-1.5
1,020,422	-		CCNA_00943	0.51	+0.9
1,020,446	-		CCNA_00943	0.52	+3.0
1,020,446	-		CCNA_00943	0.52	+1.8
1,020,446	-		CCNA_00943	0.52	+1.4
1,020,446	-		CCNA_00943	0.52	+1.3
1,020,471	+		CCNA_00943	0.53	-0.5
1,020,474	-		CCNA_00943	0.53	+2.6
1,020,479	-		CCNA_00943	0.53	+2.0
1,020,489	+		CCNA_00943	0.54	+2.3
1,020,494	+		CCNA_00943	0.54	+0.7
1,020,509	+		CCNA_00943	0.55	+0.4
1,020,509	+		CCNA_00943	0.55	-0.9
1,020,517	-		CCNA_00943	0.55	+0.4
1,020,575	+		CCNA_00943	0.58	-1.5
1,020,599	+		CCNA_00943	0.59	+0.7
1,020,615	-		CCNA_00943	0.60	+0.6
1,020,617	+		CCNA_00943	0.60	+2.8
1,020,617	+		CCNA_00943	0.60	+3.1
1,020,622	+		CCNA_00943	0.60	+0.3
1,020,630	-		CCNA_00943	0.60	+2.2
1,020,643	-		CCNA_00943	0.61	+1.3
1,020,674	-		CCNA_00943	0.62	+1.0
1,020,679	+		CCNA_00943	0.63	-0.4
1,020,709	+		CCNA_00943	0.64	-1.5
1,020,714	+		CCNA_00943	0.64	+0.5
1,020,735	+		CCNA_00943	0.65	-2.0
1,020,773	+		CCNA_00943	0.67	-0.7
1,020,774	+		CCNA_00943	0.67	-1.5
1,020,774	+		CCNA_00943	0.67	+0.7
1,020,774	+		CCNA_00943	0.67	-1.6
1,020,782	-		CCNA_00943	0.68	+1.2
1,020,782	-		CCNA_00943	0.68	+2.0
1,020,782	-		CCNA_00943	0.68	+1.1
1,020,797	+		CCNA_00943	0.68	-1.1
1,020,797	-		CCNA_00943	0.68	+1.6
1,020,802	+		CCNA_00943	0.69	-0.5
1,020,805	-		CCNA_00943	0.69	+1.5
1,020,810	-		CCNA_00943	0.69	+1.1
1,020,821	-		CCNA_00943	0.69	+1.4
1,020,841	+		CCNA_00943	0.70	+2.3
1,020,849	-		CCNA_00943	0.71	+0.1
1,020,849	-		CCNA_00943	0.71	+1.7
1,020,867	+		CCNA_00943	0.72	-0.3
1,020,867	+		CCNA_00943	0.72	+1.3
1,020,867	+		CCNA_00943	0.72	+0.8
1,020,867	+		CCNA_00943	0.72	+0.7
1,020,867	+		CCNA_00943	0.72	-0.7
1,020,875	-		CCNA_00943	0.72	+1.3
1,020,875	-		CCNA_00943	0.72	+1.5
1,020,875	-		CCNA_00943	0.72	+0.6
1,020,875	-		CCNA_00943	0.72	+1.2
1,020,875	-		CCNA_00943	0.72	+1.9
1,020,875	-		CCNA_00943	0.72	+1.3
1,020,875	-		CCNA_00943	0.72	+2.3
1,020,875	-		CCNA_00943	0.72	+1.2
1,020,907	+		CCNA_00943	0.73	+0.9
1,020,915	-		CCNA_00943	0.74	-0.0
1,020,915	-		CCNA_00943	0.74	+1.9
1,020,956	+		CCNA_00943	0.76	-1.8
1,020,958	+		CCNA_00943	0.76	+0.3
1,020,958	+		CCNA_00943	0.76	+1.3
1,020,966	-		CCNA_00943	0.76	+1.2
1,021,008	-		CCNA_00943	0.78	+0.8
1,021,010	+		CCNA_00943	0.78	-0.9
1,021,065	+		CCNA_00943	0.81	+0.7
1,021,070	+		CCNA_00943	0.81	+0.7
1,021,070	+		CCNA_00943	0.81	-0.9
1,021,073	-		CCNA_00943	0.81	+1.8
1,021,078	-		CCNA_00943	0.82	+0.9
1,021,086	-		CCNA_00943	0.82	+1.0
1,021,126	+		CCNA_00943	0.84	-0.9
1,021,134	-		CCNA_00943	0.84	+1.6
1,021,134	-		CCNA_00943	0.84	+1.2
1,021,145	-		CCNA_00943	0.85	+0.9
1,021,165	+		CCNA_00943	0.86	-0.5
1,021,187	+		CCNA_00943	0.87	+0.3
1,021,279	-				+1.1
1,021,279	-				+0.8
1,021,283	+				-0.0
1,021,323	+				-0.2
1,021,326	-				+3.0
1,021,374	+				+0.5
1,021,377	-				-0.3
1,021,394	-				-2.2
1,021,401	+				-1.2
1,021,409	-				-0.3
1,021,409	-				-0.6
1,021,463	+				-2.1
1,021,468	+				-0.3
1,021,471	-				-0.0
1,021,476	-				+0.2
1,021,486	-		CCNA_03944	0.14	+1.5
1,021,565	+		CCNA_03944	0.81	+2.3
1,021,803	+				+2.5
1,021,870	+				+2.7
1,021,962	+				+2.4
1,021,965	-				-0.0
1,021,982	+				+2.3
1,022,016	-		CCNA_00944	0.12	+0.3
1,022,095	-		CCNA_00944	0.19	-0.0
1,022,110	+		CCNA_00944	0.20	+3.0
1,022,110	+		CCNA_00944	0.20	+3.1
1,022,115	+		CCNA_00944	0.21	+2.4
1,022,261	-		CCNA_00944	0.33	-0.0
1,022,321	+		CCNA_00944	0.38	+3.1
1,022,389	+		CCNA_00944	0.43	+2.9
1,022,409	+		CCNA_00944	0.45	+2.6
1,022,426	-		CCNA_00944	0.46	-1.6
1,022,443	+		CCNA_00944	0.48	+2.9
1,022,446	-		CCNA_00944	0.48	-0.6
1,022,446	-		CCNA_00944	0.48	-0.4