Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28075
Experiment: Rifampicin 0.0024 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.0024 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,410,354 | + | AO356_28070 | 0.43 | -0.3 | |
6,410,355 | - | AO356_28070 | 0.43 | -0.2 | |
6,410,355 | - | AO356_28070 | 0.43 | +0.8 | |
6,410,355 | - | AO356_28070 | 0.43 | -0.4 | |
6,410,355 | - | AO356_28070 | 0.43 | -1.2 | |
6,410,658 | - | AO356_28070 | 0.68 | +0.4 | |
6,410,658 | - | AO356_28070 | 0.68 | +1.2 | |
6,410,777 | - | AO356_28070 | 0.77 | +1.4 | |
6,410,924 | + | AO356_28070 | 0.89 | -1.4 | |
6,410,924 | + | AO356_28070 | 0.89 | -0.0 | |
6,411,324 | + | +0.9 | |||
6,411,324 | + | -1.8 | |||
6,411,325 | - | -1.5 | |||
6,411,325 | - | -0.1 | |||
6,411,325 | - | -0.8 | |||
6,411,350 | - | +0.6 | |||
6,411,353 | - | -1.2 | |||
6,411,385 | + | +1.7 | |||
6,411,385 | + | +1.3 | |||
6,411,386 | - | +1.0 | |||
6,411,410 | + | +0.5 | |||
6,411,410 | + | +0.5 | |||
6,411,459 | + | +0.4 | |||
6,411,460 | - | -0.6 | |||
6,411,460 | - | +0.3 | |||
6,411,988 | - | AO356_28080 | 0.47 | -0.1 | |
6,412,120 | - | AO356_28080 | 0.58 | +1.0 | |
6,412,165 | - | AO356_28080 | 0.62 | +0.2 | |
6,412,251 | + | AO356_28080 | 0.69 | -1.7 |
Or see this region's nucleotide sequence