Experiment: Rifampicin 0.0024 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25235 and AO356_25240 are separated by 31 nucleotides AO356_25240 and AO356_25245 overlap by 4 nucleotides AO356_25245 and AO356_25250 are separated by 136 nucleotides
AO356_25235: AO356_25235 - anaerobic ribonucleoside-triphosphate reductase, at 5,713,064 to 5,715,079
_25235
AO356_25240: AO356_25240 - oxidoreductase, at 5,715,111 to 5,715,272
_25240
AO356_25245: AO356_25245 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 5,715,269 to 5,715,964
_25245
AO356_25250: AO356_25250 - hypothetical protein, at 5,716,101 to 5,717,468
_25250
Position (kb) 5715
5716 Strain fitness (log2 ratio) -1
0
1 at 5714.334 kb on - strand, within AO356_25235 at 5714.339 kb on + strand, within AO356_25235 at 5714.454 kb on - strand, within AO356_25235 at 5714.454 kb on - strand, within AO356_25235 at 5714.460 kb on - strand, within AO356_25235 at 5714.471 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.654 kb on + strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.655 kb on - strand, within AO356_25235 at 5714.690 kb on + strand, within AO356_25235 at 5714.690 kb on + strand, within AO356_25235 at 5714.759 kb on + strand, within AO356_25235 at 5714.762 kb on + strand, within AO356_25235 at 5714.763 kb on - strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.873 kb on + strand, within AO356_25235 at 5714.874 kb on - strand, within AO356_25235 at 5714.996 kb on + strand at 5715.740 kb on + strand, within AO356_25245 at 5715.741 kb on - strand, within AO356_25245 at 5715.958 kb on + strand at 5715.958 kb on + strand at 5715.959 kb on - strand at 5715.959 kb on - strand at 5715.959 kb on - strand at 5716.094 kb on + strand at 5716.095 kb on - strand at 5716.095 kb on - strand at 5716.102 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Rifampicin 0.0024 mg/ml remove 5,714,334 - AO356_25235 0.63 +0.7 5,714,339 + AO356_25235 0.63 -0.4 5,714,454 - AO356_25235 0.69 -1.5 5,714,454 - AO356_25235 0.69 +0.2 5,714,460 - AO356_25235 0.69 +0.5 5,714,471 + AO356_25235 0.70 -0.7 5,714,654 + AO356_25235 0.79 -0.2 5,714,654 + AO356_25235 0.79 +0.0 5,714,654 + AO356_25235 0.79 +0.2 5,714,655 - AO356_25235 0.79 -0.6 5,714,655 - AO356_25235 0.79 -0.4 5,714,655 - AO356_25235 0.79 -0.4 5,714,690 + AO356_25235 0.81 -0.5 5,714,690 + AO356_25235 0.81 -0.0 5,714,759 + AO356_25235 0.84 -1.3 5,714,762 + AO356_25235 0.84 +0.2 5,714,763 - AO356_25235 0.84 +0.4 5,714,873 + AO356_25235 0.90 +0.1 5,714,873 + AO356_25235 0.90 -0.6 5,714,873 + AO356_25235 0.90 +0.1 5,714,874 - AO356_25235 0.90 -0.7 5,714,996 + -0.4 5,715,740 + AO356_25245 0.68 +0.6 5,715,741 - AO356_25245 0.68 +0.8 5,715,958 + -1.0 5,715,958 + +0.2 5,715,959 - -0.9 5,715,959 - +0.6 5,715,959 - -0.6 5,716,094 + +0.3 5,716,095 - -1.5 5,716,095 - +0.4 5,716,102 + +0.1
Or see this region's nucleotide sequence