Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_24240

Experiment: Rifampicin 0.0024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0024 mg/ml
5,437,635	+		AO356_24235	0.65	+1.3
5,437,636	-		AO356_24235	0.65	-0.2
5,437,650	+		AO356_24235	0.66	+0.0
5,437,820	-		AO356_24235	0.75	-0.5
5,437,843	+		AO356_24235	0.77	-0.5
5,437,843	+		AO356_24235	0.77	+0.0
5,437,843	+		AO356_24235	0.77	-0.4
5,437,844	-		AO356_24235	0.77	+0.9
5,437,844	-		AO356_24235	0.77	-0.5
5,437,939	+		AO356_24235	0.82	-0.3
5,437,939	+		AO356_24235	0.82	+0.5
5,437,959	+		AO356_24235	0.83	-0.1
5,437,959	+		AO356_24235	0.83	+0.1
5,437,960	-		AO356_24235	0.83	+0.9
5,437,960	-		AO356_24235	0.83	+0.6
5,437,960	-		AO356_24235	0.83	+0.4
5,437,960	-		AO356_24235	0.83	+0.3
5,437,960	-		AO356_24235	0.83	+0.1
5,437,960	-		AO356_24235	0.83	+0.9
5,437,965	+		AO356_24235	0.83	+0.5
5,437,965	+		AO356_24235	0.83	+0.4
5,437,965	+		AO356_24235	0.83	+0.4
5,437,965	+		AO356_24235	0.83	-0.0
5,437,966	-		AO356_24235	0.83	-0.3
5,437,966	-		AO356_24235	0.83	+0.3
5,437,966	-		AO356_24235	0.83	+0.7
5,438,025	+		AO356_24235	0.86	-0.1
5,438,026	-		AO356_24235	0.86	-0.7
5,438,098	-				-0.1
5,438,098	-				+0.3
5,438,098	-				+0.7
5,438,157	+				+0.1
5,438,157	+				-0.9
5,438,157	+				+1.2
5,438,158	-				-0.9
5,438,158	-				+0.3
5,438,366	+				-0.4
5,438,367	-				+0.2
5,438,390	+				-0.1
5,438,390	+				+0.4
5,438,390	+				-0.3
5,438,390	+				+0.3
5,438,391	-				+0.4
5,438,391	-				+0.0
5,438,391	-				-1.1
5,438,391	-				-0.6
5,438,391	-				-1.0
5,438,393	-				+0.0
5,438,393	-				-0.1
5,438,409	-				-0.1
5,438,578	+				-1.1
5,438,744	+				-2.1
5,439,011	+		AO356_24240	0.24	+0.2
5,439,276	+		AO356_24240	0.40	-0.7
5,439,356	+		AO356_24240	0.44	-2.6
5,439,356	+		AO356_24240	0.44	-0.4
5,439,395	-		AO356_24240	0.47	+0.3
5,439,395	-		AO356_24240	0.47	-0.1
5,439,461	-		AO356_24240	0.50	-2.1
5,439,483	-		AO356_24240	0.52	+0.7
5,439,483	-		AO356_24240	0.52	-1.0
5,439,483	-		AO356_24240	0.52	-0.8
5,439,483	-		AO356_24240	0.52	-1.7
5,439,483	-		AO356_24240	0.52	+0.1
5,439,483	-		AO356_24240	0.52	-1.0
5,439,597	-		AO356_24240	0.58	-0.9
5,439,734	+		AO356_24240	0.66	-0.6
5,439,734	+		AO356_24240	0.66	-1.6
5,439,735	-		AO356_24240	0.66	-1.4
5,440,128	-		AO356_24240	0.90	-0.8
5,440,151	+				-0.1
5,440,214	-				+0.6
5,440,214	-				-0.7
5,440,389	+				-1.9
5,440,459	-				+0.2
5,440,614	-		AO356_24245	0.11	-1.1
5,440,614	-		AO356_24245	0.11	-2.4
5,440,778	+		AO356_24245	0.36	-0.5
5,440,779	-		AO356_24245	0.36	+0.4
5,441,032	-		AO356_24245	0.75	+0.3
5,441,073	-		AO356_24245	0.81	-2.1
5,441,165	+				+0.1
5,441,174	+				-0.1
5,441,174	+				-0.8
5,441,174	+				-0.3
5,441,175	-				+0.4
5,441,175	-				-0.8
5,441,175	-				-0.9
5,441,175	-				+0.6
5,441,175	-				-1.1
5,441,175	-				-0.8
5,441,175	-				+1.1
5,441,175	-				-1.3
5,441,175	-				+0.6
5,441,283	-				+0.2
5,441,283	-				+1.3