Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16610

Experiment: Rifampicin 0.0024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0024 mg/ml
3,748,147	+				+0.9
3,748,148	-				-0.3
3,748,172	+				+2.0
3,748,278	-				-0.4
3,748,278	-				+1.0
3,748,432	+				+0.5
3,748,432	+				+0.5
3,748,432	+				+1.7
3,748,432	+				+2.4
3,748,432	+				+1.2
3,748,433	-				+0.5
3,748,433	-				-0.8
3,748,433	-				+0.5
3,748,433	-				-0.3
3,748,433	-				-1.0
3,748,433	-				-0.8
3,748,474	+				+0.8
3,748,474	+				+1.3
3,748,474	+				+1.7
3,748,475	-				-0.4
3,748,475	-				-0.3
3,748,587	+				+0.1
3,748,633	+				+1.6
3,748,633	+				+2.4
3,748,633	+				+1.3
3,748,633	+				+1.3
3,748,634	-				+1.1
3,748,634	-				-0.5
3,748,635	+				+1.9
3,748,636	-				+1.0
3,748,652	+				+1.2
3,748,653	-				+0.3
3,748,653	-				+0.1
3,748,693	+				+0.1
3,748,693	+				+0.5
3,748,693	+				+0.2
3,748,693	+				+0.4
3,748,694	-				+0.9
3,748,694	-				-0.9
3,748,694	-				-0.2
3,748,696	+				+1.3
3,749,002	+				+0.6
3,749,002	+				+0.2
3,749,002	+				+0.3
3,749,002	+				+0.4
3,749,002	+				+0.8
3,749,002	+				-0.4
3,749,002	+				-0.5
3,749,002	+				-0.1
3,749,002	+				+0.3
3,749,002	+				-0.4
3,749,002	+				-0.0
3,749,002	+				-0.4
3,749,002	+				+0.3
3,749,002	+				+0.6
3,749,003	-				-0.5
3,749,003	-				-0.0
3,749,003	-				-0.0
3,749,003	-				-0.8
3,749,003	-				-0.2
3,749,003	-				-0.7
3,749,003	-				+0.5
3,749,063	+				+0.6
3,749,063	+				-0.2
3,749,080	+				+0.3
3,749,080	+				+0.1
3,749,081	-				-0.3
3,749,081	-				-0.5
3,749,081	-				-0.3
3,749,104	+				-1.2
3,749,106	+				-0.1
3,749,106	+				-1.3
3,749,106	+				-0.6
3,749,107	-				-0.6
3,749,107	-				-1.2
3,749,226	+		AO356_16610	0.14	-1.5
3,749,494	+		AO356_16610	0.59	-1.8
3,749,494	+		AO356_16610	0.59	-1.7
3,749,494	+		AO356_16610	0.59	-2.7
3,749,494	+		AO356_16610	0.59	-0.7
3,749,494	+		AO356_16610	0.59	+0.0
3,749,495	-		AO356_16610	0.60	-1.7
3,749,495	-		AO356_16610	0.60	-2.3
3,749,518	+		AO356_16610	0.64	+0.4
3,749,518	+		AO356_16610	0.64	-3.2
3,749,518	+		AO356_16610	0.64	-1.2
3,749,518	+		AO356_16610	0.64	+0.0
3,749,518	+		AO356_16610	0.64	-2.8
3,749,518	+		AO356_16610	0.64	-0.3
3,749,518	+		AO356_16610	0.64	+0.0
3,749,518	+		AO356_16610	0.64	-1.0
3,749,518	+		AO356_16610	0.64	-0.1
3,749,518	+		AO356_16610	0.64	-0.6
3,749,519	-		AO356_16610	0.64	-0.9
3,749,519	-		AO356_16610	0.64	-1.3
3,749,519	-		AO356_16610	0.64	-1.5
3,749,519	-		AO356_16610	0.64	-0.9
3,749,519	-		AO356_16610	0.64	-2.8
3,749,519	-		AO356_16610	0.64	-1.2
3,749,519	-		AO356_16610	0.64	-1.3
3,749,519	-		AO356_16610	0.64	-1.2
3,749,519	-		AO356_16610	0.64	-1.4
3,749,519	-		AO356_16610	0.64	-3.0
3,749,519	-		AO356_16610	0.64	-2.9
3,749,519	-		AO356_16610	0.64	-2.9
3,749,581	+		AO356_16610	0.74	-2.4
3,749,666	+		AO356_16610	0.89	-2.2
3,749,666	+		AO356_16610	0.89	-0.5
3,749,666	+		AO356_16610	0.89	-3.3
3,749,666	+		AO356_16610	0.89	-3.4
3,749,667	-		AO356_16610	0.89	-1.9
3,749,667	-		AO356_16610	0.89	-1.8
3,749,667	-		AO356_16610	0.89	-2.6
3,749,728	+				-2.0
3,749,729	-				-0.5
3,749,729	-				-1.1
3,749,735	+				+0.3
3,749,735	+				+0.1
3,749,735	+				+0.2
3,749,736	-				-3.6
3,749,736	-				-0.0
3,749,736	-				-0.2
3,749,862	+				-0.2
3,749,940	+		AO356_16615	0.45	-0.3
3,749,940	+		AO356_16615	0.45	-0.3
3,749,941	-		AO356_16615	0.46	-0.5
3,749,941	-		AO356_16615	0.46	-0.4
3,750,021	+		AO356_16615	0.85	-0.7
3,750,021	+		AO356_16615	0.85	-0.2
3,750,021	+		AO356_16615	0.85	-0.3
3,750,022	-		AO356_16615	0.85	+0.7
3,750,022	-		AO356_16615	0.85	+0.7
3,750,092	+				-0.2
3,750,092	+				-0.3
3,750,092	+				-1.2
3,750,093	-				+0.0
3,750,093	-				+1.0
3,750,196	+				-0.6
3,750,264	+				+0.0
3,750,264	+				-0.8
3,750,264	+				-1.5
3,750,264	+				+1.5
3,750,264	+				-0.7
3,750,265	-				+0.0
3,750,265	-				+0.1
3,750,265	-				+0.4
3,750,371	+				+0.4
3,750,372	-				+0.1
3,750,372	-				-1.4
3,750,511	+		AO356_16620	0.32	+0.3
3,750,690	-				-0.1
3,750,707	+				-0.5
3,750,707	+				+1.1
3,750,707	+				+0.5
3,750,707	+				-0.7
3,750,707	+				+0.4
3,750,707	+				-0.2
3,750,707	+				+0.2
3,750,707	+				+0.6
3,750,708	-				-1.0