Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09235

Experiment: Rifampicin 0.0024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0024 mg/ml
2,085,926	+		AO356_09230	0.77	-1.0
2,085,926	+		AO356_09230	0.77	+0.2
2,085,926	+		AO356_09230	0.77	+0.5
2,085,927	-		AO356_09230	0.77	+1.0
2,085,959	+		AO356_09230	0.85	-1.1
2,085,959	+		AO356_09230	0.85	-0.4
2,085,959	+		AO356_09230	0.85	+0.4
2,085,960	-		AO356_09230	0.85	+0.1
2,085,960	-		AO356_09230	0.85	-0.8
2,085,960	-		AO356_09230	0.85	+1.0
2,086,047	+				-0.9
2,086,048	-				+1.4
2,086,408	+				-1.0
2,086,455	+				-0.3
2,086,523	+				-0.4
2,086,656	+				+0.9
2,086,721	+				+0.7
2,086,721	+				+0.7
2,086,961	-		AO356_09235	0.24	-0.8
2,086,961	-		AO356_09235	0.24	+0.8
2,087,015	-		AO356_09235	0.34	-0.0
2,087,015	-		AO356_09235	0.34	+0.6
2,087,015	-		AO356_09235	0.34	-0.6
2,087,015	-		AO356_09235	0.34	-1.1
2,087,015	-		AO356_09235	0.34	+0.5
2,087,064	+		AO356_09235	0.43	-0.0
2,087,064	+		AO356_09235	0.43	-0.2
2,087,064	+		AO356_09235	0.43	-0.3
2,087,065	-		AO356_09235	0.44	-0.1
2,087,065	-		AO356_09235	0.44	+0.3
2,087,065	-		AO356_09235	0.44	-0.3
2,087,065	-		AO356_09235	0.44	+0.7
2,087,065	-		AO356_09235	0.44	+0.2
2,087,065	-		AO356_09235	0.44	+0.1
2,087,194	-		AO356_09235	0.68	+0.5
2,087,197	+		AO356_09235	0.68	+0.6
2,087,292	+		AO356_09235	0.86	-0.7
2,087,292	+		AO356_09235	0.86	-0.1
2,087,292	+		AO356_09235	0.86	+0.9
2,087,292	+		AO356_09235	0.86	+0.1
2,087,293	-		AO356_09235	0.86	+1.2
2,087,340	+				-0.7
2,087,341	-				-0.3
2,087,341	-				-1.0
2,087,379	-				-0.2
2,087,450	+				+1.2
2,087,451	-				+0.2
2,087,451	-				+0.6
2,087,451	-				+0.6
2,087,494	-				+0.9
2,087,494	-				-1.3
2,087,506	+				-0.6
2,087,522	+				+0.0
2,087,557	-				-1.1
2,087,557	-				-0.3
2,087,571	+				-0.6
2,087,572	-				-0.1
2,087,572	-				+0.7
2,087,618	+				-0.4
2,087,675	+				-1.1
2,087,676	-				+0.3
2,087,676	-				+1.9
2,087,713	+				+0.0
2,087,714	-				+0.6
2,087,738	-		AO356_09240	0.12	-0.8
2,087,762	+		AO356_09240	0.15	-1.1
2,087,762	+		AO356_09240	0.15	+1.0
2,087,763	-		AO356_09240	0.15	+0.4
2,087,792	+		AO356_09240	0.18	-1.8
2,087,793	-		AO356_09240	0.18	+0.4
2,087,891	+		AO356_09240	0.27	+0.3
2,087,892	-		AO356_09240	0.28	+0.8
2,087,892	-		AO356_09240	0.28	+0.1
2,087,994	+		AO356_09240	0.38	-0.0
2,087,994	+		AO356_09240	0.38	+0.6
2,088,182	+		AO356_09240	0.57	-1.7
2,088,183	-		AO356_09240	0.57	+0.2
2,088,219	-		AO356_09240	0.60	-0.1
2,088,219	-		AO356_09240	0.60	+0.4
2,088,236	+		AO356_09240	0.62	-0.7