Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06995

Experiment: Rifampicin 0.0024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0024 mg/ml
1,545,428	+		AO356_06985	0.14	-0.1
1,545,905	+		AO356_06990	0.31	-1.0
1,545,906	-		AO356_06990	0.31	-1.1
1,545,917	+		AO356_06990	0.33	-1.8
1,545,918	-		AO356_06990	0.33	-1.4
1,546,013	+		AO356_06990	0.48	-1.3
1,546,013	+		AO356_06990	0.48	-1.9
1,546,013	+		AO356_06990	0.48	-0.7
1,546,014	-		AO356_06990	0.48	-2.1
1,546,014	-		AO356_06990	0.48	-2.8
1,546,034	+		AO356_06990	0.51	-2.2
1,546,035	-		AO356_06990	0.51	-0.8
1,546,106	+		AO356_06990	0.62	-1.4
1,546,181	+		AO356_06990	0.74	-1.2
1,546,181	+		AO356_06990	0.74	-2.6
1,546,181	+				-0.3
1,546,181	+		AO356_06990	0.74	-0.4
1,546,182	-		AO356_06990	0.74	+0.0
1,546,205	+		AO356_06990	0.77	-2.3
1,546,205	+		AO356_06990	0.77	-1.0
1,546,205	+		AO356_06990	0.77	-1.9
1,546,206	-		AO356_06990	0.77	-0.5
1,546,206	-		AO356_06990	0.77	-1.1
1,546,206	-		AO356_06990	0.77	-1.9
1,546,332	+				-2.0
1,546,332	+				-1.1
1,546,333	-				-1.8
1,546,333	-				-1.0
1,546,333	-				-1.5
1,546,333	-				-2.7
1,546,333	-				-2.7
1,546,344	+				-0.6
1,546,344	+				-2.1
1,546,344	+				-1.0
1,546,344	+				-1.3
1,546,345	-				-1.8
1,546,345	-				-1.8
1,546,388	+				-2.6
1,546,389	-				-2.2
1,546,501	+		AO356_06995	0.29	-2.0
1,546,501	+		AO356_06995	0.29	-1.5
1,546,501	+		AO356_06995	0.29	-1.7
1,546,501	+		AO356_06995	0.29	-0.1
1,546,501	+		AO356_06995	0.29	-2.5
1,546,501	+		AO356_06995	0.29	-0.7
1,546,502	-		AO356_06995	0.29	-2.6
1,546,502	-		AO356_06995	0.29	-1.5
1,546,502	-		AO356_06995	0.29	-3.2
1,546,532	+		AO356_06995	0.36	-0.9
1,546,533	-		AO356_06995	0.36	+0.8
1,546,533	-		AO356_06995	0.36	-2.3
1,546,533	-		AO356_06995	0.36	-0.8
1,546,712	+		AO356_06995	0.74	-1.7
1,546,713	-		AO356_06995	0.74	-0.1
1,546,714	+		AO356_06995	0.75	-2.0
1,546,714	+				+1.0
1,546,714	+		AO356_06995	0.75	-1.0
1,546,714	+		AO356_06995	0.75	-2.1
1,546,715	-		AO356_06995	0.75	-1.5
1,546,715	-		AO356_06995	0.75	-1.7
1,546,715	-		AO356_06995	0.75	+0.0
1,546,715	-		AO356_06995	0.75	-2.6
1,546,715	-		AO356_06995	0.75	-1.5
1,546,715	-		AO356_06995	0.75	-1.9
1,546,715	-		AO356_06995	0.75	-3.2
1,546,719	-		AO356_06995	0.76	-0.5
1,546,719	-		AO356_06995	0.76	-1.5
1,546,864	+				-1.5
1,546,896	+				-1.5
1,547,193	+		AO356_07000	0.45	-0.6
1,547,193	+		AO356_07000	0.45	-0.3
1,547,193	+		AO356_07000	0.45	-1.8
1,547,193	+		AO356_07000	0.45	+0.2
1,547,193	+		AO356_07000	0.45	-0.9
1,547,376	+		AO356_07000	0.68	+1.3
1,547,376	+		AO356_07000	0.68	-1.9
1,547,652	+				-0.5
1,547,792	+		AO356_07005	0.20	-2.1
1,547,792	+		AO356_07005	0.20	-1.1
1,547,798	+		AO356_07005	0.21	-2.0