Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06335

Experiment: Rifampicin 0.0024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0024 mg/ml
1,401,611	+		AO356_06320	0.80	+0.4
1,401,612	-		AO356_06320	0.81	-0.8
1,401,612	-		AO356_06320	0.81	+0.3
1,401,638	+				+0.3
1,401,638	+				-0.2
1,401,639	-				+0.3
1,401,639	-				+2.0
1,401,686	-		AO356_06325	0.20	-0.2
1,401,686	-		AO356_06325	0.20	-0.0
1,402,006	+		AO356_06330	0.20	+0.5
1,402,143	+				-0.4
1,402,143	+				-0.6
1,402,144	-				+0.2
1,402,144	-				+0.3
1,402,169	+				+0.9
1,402,169	+				+0.3
1,402,169	+				-0.3
1,402,169	+				+0.2
1,402,170	-				+0.4
1,402,170	-				-0.9
1,402,170	-				-0.0
1,402,188	+				+0.2
1,402,189	-				+0.6
1,402,210	-				+0.2
1,402,218	+				+1.0
1,402,219	-				-0.8
1,402,219	-				+0.8
1,402,233	+				+0.2
1,402,233	+				-0.6
1,402,234	-				+0.7
1,402,270	+				-0.1
1,402,274	+				+0.4
1,402,275	-				-0.6
1,402,275	-				-0.1
1,402,299	+				+0.5
1,402,300	-				+0.7
1,402,362	+				+0.1
1,402,362	+				-0.7
1,402,362	+				-0.0
1,402,362	+				-0.2
1,402,362	+				+0.9
1,402,362	+				+0.7
1,402,363	-				+0.3
1,402,410	+				-0.7
1,402,410	+				-1.0
1,402,410	+				-0.6
1,402,410	+				+0.1
1,402,410	+				+1.1
1,402,411	-				+0.7
1,402,411	-				+0.4
1,402,411	-				+0.1
1,402,411	-				-0.3
1,402,411	-				-0.9
1,402,419	+				+0.3
1,402,420	-				-0.2
1,402,420	-				-0.4
1,402,461	+				+0.3
1,402,462	-				-1.2
1,402,462	-				-0.6
1,402,511	+				-1.4
1,402,511	+				-0.1
1,402,511	+				-0.3
1,402,511	+				-0.2
1,402,511	+				+0.1
1,402,512	-				-0.0
1,402,512	-				+0.4
1,402,512	-				-0.4
1,402,512	-				-0.2
1,402,512	-				+0.6
1,402,512	-				-2.2
1,402,512	-				+0.4
1,402,512	-				+0.8
1,402,512	-				-0.6
1,402,515	+				-0.2
1,402,515	+				-0.5
1,402,515	+				-0.0
1,402,515	+				+0.0
1,402,515	+				+0.4
1,402,515	+				-1.1
1,402,516	-				+0.2
1,402,516	-				-1.3
1,402,516	-				-0.9
1,402,516	-				+0.8
1,402,562	-				-0.1
1,402,694	-		AO356_06335	0.11	-1.2
1,402,765	+		AO356_06335	0.15	-0.6
1,402,765	+		AO356_06335	0.15	-0.8
1,402,864	+		AO356_06335	0.21	+1.0
1,402,864	+		AO356_06335	0.21	-0.4
1,402,864	+		AO356_06335	0.21	-0.0
1,402,864	+		AO356_06335	0.21	-0.1
1,402,864	+		AO356_06335	0.21	-0.7
1,402,864	+		AO356_06335	0.21	-0.5
1,402,865	-		AO356_06335	0.21	-0.3
1,402,865	-		AO356_06335	0.21	-0.0
1,402,865	-		AO356_06335	0.21	+1.0
1,402,865	-		AO356_06335	0.21	+0.3
1,402,865	-		AO356_06335	0.21	-0.9
1,402,865	-		AO356_06335	0.21	+0.2
1,402,865	-		AO356_06335	0.21	+0.7
1,402,865	-		AO356_06335	0.21	-0.4
1,402,865	-		AO356_06335	0.21	-2.4
1,402,887	+		AO356_06335	0.23	-0.6
1,402,888	-		AO356_06335	0.23	-0.4
1,402,927	+		AO356_06335	0.25	-0.9
1,402,927	+		AO356_06335	0.25	-0.1
1,402,928	-		AO356_06335	0.25	+0.6
1,402,928	-		AO356_06335	0.25	-0.2
1,403,048	-		AO356_06335	0.33	-0.5
1,403,048	-		AO356_06335	0.33	+0.5
1,403,077	+		AO356_06335	0.34	-0.2
1,403,113	+		AO356_06335	0.37	-0.9
1,403,113	+		AO356_06335	0.37	-1.1
1,403,114	-		AO356_06335	0.37	-2.0
1,403,114	-		AO356_06335	0.37	+0.6
1,403,114	-		AO356_06335	0.37	+0.3
1,403,114	-		AO356_06335	0.37	+0.7
1,403,114	-		AO356_06335	0.37	+0.8
1,403,114	-		AO356_06335	0.37	+0.4
1,403,114	-		AO356_06335	0.37	-0.5
1,403,114	-		AO356_06335	0.37	+0.3
1,403,114	-		AO356_06335	0.37	+0.8
1,403,197	+		AO356_06335	0.42	-0.4
1,403,197	+		AO356_06335	0.42	-0.2
1,403,197	+		AO356_06335	0.42	+0.0
1,403,197	+		AO356_06335	0.42	+0.5
1,403,198	-		AO356_06335	0.42	-0.6
1,403,198	-		AO356_06335	0.42	-0.7
1,403,198	-		AO356_06335	0.42	+0.6
1,403,198	-		AO356_06335	0.42	-0.6
1,403,198	-		AO356_06335	0.42	-1.4
1,403,234	-		AO356_06335	0.44	-0.3
1,403,548	+		AO356_06335	0.63	-1.2
1,403,549	-		AO356_06335	0.63	-0.6
1,403,725	+		AO356_06335	0.74	-0.6
1,403,725	+		AO356_06335	0.74	-0.1
1,403,725	+		AO356_06335	0.74	+0.9
1,403,725	+		AO356_06335	0.74	-0.5
1,403,725	+		AO356_06335	0.74	+1.6
1,403,726	-		AO356_06335	0.74	+0.0
1,403,726	-		AO356_06335	0.74	+0.8
1,403,726	-		AO356_06335	0.74	+1.6
1,403,726	-		AO356_06335	0.74	-0.1
1,403,726	-		AO356_06335	0.74	-0.0
1,403,726	-		AO356_06335	0.74	-1.6
1,403,726	-		AO356_06335	0.74	-1.6
1,403,726	-		AO356_06335	0.74	+0.3
1,403,731	+		AO356_06335	0.75	-0.2
1,403,731	+		AO356_06335	0.75	-0.3
1,403,740	+		AO356_06335	0.75	-0.7
1,403,740	+		AO356_06335	0.75	+0.6
1,403,741	-		AO356_06335	0.75	-2.0
1,404,003	+				+0.6
1,404,003	+				+0.5
1,404,004	-				-0.2
1,404,004	-				-0.5
1,404,101	-				-0.4
1,404,101	-				-0.6
1,404,106	+				+0.2
1,404,107	-				-0.8
1,404,107	-				-0.6
1,404,136	+				+0.8
1,404,136	+				+0.3
1,404,137	-				+0.2
1,404,137	-				-1.0
1,404,137	-				-0.8
1,404,197	+				-1.2
1,404,197	+				+0.1
1,404,197	+				-0.4
1,404,197	+				+0.3
1,404,210	+				+0.4
1,404,211	-				-0.1
1,404,211	-				+1.7
1,404,376	+				+1.3
1,404,376	+				+1.2
1,404,377	-				+0.6
1,404,833	-		AO356_06340	0.46	-0.2
1,404,883	+		AO356_06340	0.51	+0.5
1,404,884	-		AO356_06340	0.51	+0.6
1,404,884	-		AO356_06340	0.51	-0.9
1,405,134	+		AO356_06340	0.73	+0.8
1,405,135	-		AO356_06340	0.74	+0.1
1,405,135	-		AO356_06340	0.74	+1.0
1,405,135	-		AO356_06340	0.74	-1.4
1,405,135	-		AO356_06340	0.74	-0.3