Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04885

Experiment: Rifampicin 0.0024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0024 mg/ml
1,098,232	+		AO356_04880	0.69	-1.3
1,098,232	+		AO356_04880	0.69	-2.1
1,098,232	+		AO356_04880	0.69	-1.7
1,098,233	-		AO356_04880	0.69	-1.2
1,098,233	-		AO356_04880	0.69	+0.6
1,098,321	+		AO356_04880	0.72	-0.1
1,098,321	+		AO356_04880	0.72	-0.7
1,098,321	+		AO356_04880	0.72	-1.4
1,098,322	-		AO356_04880	0.72	-0.8
1,098,322	-		AO356_04880	0.72	-1.6
1,098,322	-		AO356_04880	0.72	-0.8
1,098,325	+		AO356_04880	0.72	-2.5
1,098,325	+		AO356_04880	0.72	-1.5
1,098,325	+		AO356_04880	0.72	-0.6
1,098,325	+		AO356_04880	0.72	-1.5
1,098,325	+		AO356_04880	0.72	-0.5
1,098,325	+		AO356_04880	0.72	-0.9
1,098,326	-		AO356_04880	0.72	+0.0
1,098,326	-		AO356_04880	0.72	-1.3
1,098,326	-		AO356_04880	0.72	-1.0
1,098,326	-		AO356_04880	0.72	-0.7
1,098,326	-		AO356_04880	0.72	-0.3
1,098,326	-		AO356_04880	0.72	-1.9
1,098,326	-		AO356_04880	0.72	-0.8
1,098,367	+		AO356_04880	0.73	-2.0
1,098,367	+		AO356_04880	0.73	-0.7
1,098,367	+		AO356_04880	0.73	-1.4
1,098,368	-		AO356_04880	0.73	+0.8
1,098,368	-		AO356_04880	0.73	-2.2
1,098,421	+		AO356_04880	0.75	+0.3
1,098,422	-		AO356_04880	0.75	-2.0
1,098,422	-		AO356_04880	0.75	-2.1
1,098,484	+		AO356_04880	0.77	-1.6
1,098,484	+		AO356_04880	0.77	-0.4
1,098,485	-		AO356_04880	0.77	-1.7
1,098,485	-		AO356_04880	0.77	-1.3
1,098,508	+		AO356_04880	0.78	-0.6
1,098,508	+		AO356_04880	0.78	-2.1
1,098,509	-		AO356_04880	0.78	-1.6
1,098,509	-		AO356_04880	0.78	-0.4
1,098,643	+		AO356_04880	0.82	-2.1
1,098,643	+		AO356_04880	0.82	-0.7
1,098,643	+		AO356_04880	0.82	-0.6
1,098,644	-		AO356_04880	0.82	-0.8
1,098,682	+		AO356_04880	0.83	-0.1
1,098,682	+		AO356_04880	0.83	-1.3
1,098,682	+		AO356_04880	0.83	-1.5
1,098,682	+		AO356_04880	0.83	-2.7
1,098,682	+		AO356_04880	0.83	-1.5
1,098,683	-		AO356_04880	0.83	-1.2
1,098,683	-		AO356_04880	0.83	-1.7
1,098,683	-		AO356_04880	0.83	-2.2
1,098,683	-		AO356_04880	0.83	-0.6
1,098,683	-		AO356_04880	0.83	-0.6
1,098,727	+		AO356_04880	0.85	-0.2
1,098,829	+		AO356_04880	0.88	-2.1
1,098,829	+		AO356_04880	0.88	-1.6
1,098,829	+		AO356_04880	0.88	-0.8
1,098,829	+		AO356_04880	0.88	-0.8
1,098,830	-		AO356_04880	0.88	-1.3
1,098,830	-		AO356_04880	0.88	-2.6
1,098,830	-		AO356_04880	0.88	-1.8
1,098,830	-		AO356_04880	0.88	-1.2
1,098,954	+				-1.9
1,098,954	+				-0.2
1,098,955	-				-2.9
1,098,975	+				-1.3
1,099,093	-				-1.6
1,099,146	-				-1.5
1,099,177	-				-1.5
1,099,191	+				-1.8
1,099,275	+				-1.1
1,099,275	+				-2.0
1,099,597	-		AO356_04885	0.27	-2.4
1,099,746	+		AO356_04885	0.37	-1.1
1,099,746	+		AO356_04885	0.37	-1.2
1,099,746	+		AO356_04885	0.37	-0.9
1,099,747	-		AO356_04885	0.37	-1.7
1,099,747	-		AO356_04885	0.37	-2.4
1,100,286	+		AO356_04885	0.74	-1.6
1,100,286	+		AO356_04885	0.74	-0.6
1,100,286	+		AO356_04885	0.74	-2.0
1,100,286	+		AO356_04885	0.74	-1.0
1,100,322	+		AO356_04885	0.77	-0.6
1,100,385	+		AO356_04885	0.81	-2.3
1,100,385	+		AO356_04885	0.81	-0.6
1,100,386	-		AO356_04885	0.81	-1.6
1,100,436	+		AO356_04885	0.84	-1.2
1,100,436	+		AO356_04885	0.84	-0.7
1,100,436	+		AO356_04885	0.84	-0.5
1,100,437	-		AO356_04885	0.84	-0.6
1,100,437	-		AO356_04885	0.84	-3.2
1,100,577	+				-1.4
1,100,577	+				+0.3
1,100,578	-				-1.8
1,100,578	-				+0.7
1,100,993	+				+0.1
1,100,993	+				+0.9
1,101,094	-				+0.5
1,101,199	+				-0.4
1,101,199	+				-0.5
1,101,200	-				+0.1
1,101,200	-				+0.0
1,101,200	-				+0.7
1,101,200	-				-0.0
1,101,206	+				+1.7
1,101,206	+				+0.2
1,101,206	+				+1.4
1,101,206	+				+0.5
1,101,206	+				+0.5
1,101,207	-				-0.2
1,101,207	-				+1.0
1,101,207	-				-2.1
1,101,207	-				+0.8
1,101,207	-				-0.2
1,101,207	-				-0.8
1,101,213	-				-0.7
1,101,213	-				-0.1
1,101,213	-				+0.3
1,101,234	+				+0.5
1,101,234	+				-0.1
1,101,235	-				+0.8
1,101,235	-				+0.7
1,101,235	-				+0.5
1,101,316	+				-0.1
1,101,316	+				+0.1
1,101,341	+				-1.5
1,101,341	+				+0.2
1,101,341	+				-0.2
1,101,341	+				-0.2
1,101,341	+				+1.3
1,101,341	+				+0.4
1,101,341	+				-1.7
1,101,342	-				+0.6
1,101,342	-				-1.2
1,101,342	-				-2.0
1,101,342	-				-2.1
1,101,342	-				+1.7
1,101,345	+				+1.0
1,101,345	+				+0.3
1,101,345	+				-0.7
1,101,345	+				-0.1
1,101,346	-				-0.2
1,101,346	-				-0.2
1,101,346	-				+0.6
1,101,346	-				-0.9
1,101,346	-				-0.2
1,101,346	-				-0.0
1,101,346	-				+0.4
1,101,372	-				+0.4
1,101,372	-				-0.9