Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04430

Experiment: Rifampicin 0.0024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0024 mg/ml
1,001,927	+				-0.1
1,001,927	+				-1.2
1,001,927	+				+0.3
1,001,927	+				-1.0
1,001,927	+				-0.1
1,001,927	+				+0.7
1,001,927	+				-0.3
1,001,927	+				+0.2
1,001,927	+				-0.7
1,001,927	+				-1.4
1,001,927	+				-0.5
1,001,927	+				-0.7
1,001,928	-				+0.5
1,001,928	-				+0.4
1,001,928	-				-1.1
1,001,928	-				-0.0
1,001,928	-				+0.9
1,001,928	-				+0.4
1,001,928	-				-0.0
1,001,928	-				+0.1
1,001,928	-				+0.1
1,001,928	-				+0.5
1,001,928	-				-0.7
1,001,928	-				+1.0
1,001,928	-				-0.2
1,001,929	+				+2.0
1,001,929	+				+0.6
1,001,929	+				-0.9
1,001,929	+				-0.4
1,001,929	+				-1.9
1,001,929	+				+0.7
1,001,929	+				+0.1
1,001,929	+				+0.0
1,001,929	+				+0.4
1,001,929	+				-1.2
1,001,929	+				+0.6
1,001,929	+				-0.2
1,001,929	+				-0.6
1,001,929	+				-1.8
1,001,929	+				+0.2
1,001,930	-				-0.2
1,001,930	-				-1.0
1,001,930	-				+0.6
1,001,930	-				+0.3
1,001,930	-				-0.2
1,001,930	-				+0.9
1,001,930	-				-1.3
1,001,930	-				-0.1
1,001,930	-				-0.6
1,001,930	-				+0.0
1,001,930	-				-0.6
1,001,930	-				+0.0
1,001,931	+				-2.5
1,001,931	+				+0.4
1,001,931	+				-0.8
1,001,931	+				+0.4
1,001,931	+				+0.3
1,001,932	-				+0.7
1,001,959	+				-0.2
1,001,959	+				+0.1
1,001,959	+				-0.9
1,001,960	-				+0.8
1,001,960	-				+0.2
1,001,960	-				+0.9
1,001,960	-				-0.5
1,002,002	+				-0.4
1,002,002	+				-1.0
1,002,002	+				-0.4
1,002,002	+				-0.4
1,002,002	+				-0.3
1,002,002	+				+0.7
1,002,003	-				-0.3
1,002,003	-				-0.8
1,002,003	-				-0.2
1,002,003	-				-0.3
1,002,003	-				+1.0
1,002,008	+				-1.3
1,002,009	-				-0.3
1,002,009	-				-0.6
1,002,009	-				+1.6
1,002,009	-				-1.5
1,002,009	-				+0.1
1,002,030	+				+0.2
1,002,041	+				-0.3
1,002,041	+				+0.7
1,002,041	+				-0.7
1,002,041	+				-0.2
1,002,042	-				+0.6
1,002,042	-				-0.0
1,002,042	-				-0.2
1,002,291	+		AO356_04425	0.42	+0.3
1,002,291	+		AO356_04425	0.42	+0.5
1,002,291	+		AO356_04425	0.42	-0.6
1,002,291	+		AO356_04425	0.42	+0.5
1,002,292	-		AO356_04425	0.43	+0.1
1,002,292	-		AO356_04425	0.43	-1.2
1,002,292	-		AO356_04425	0.43	-0.2
1,002,292	-		AO356_04425	0.43	-2.8
1,002,451	+		AO356_04425	0.67	+0.1
1,002,660	+				+0.6
1,002,660	+				-0.4
1,002,660	+				+0.9
1,002,661	-				+0.1
1,002,661	-				+0.6
1,002,661	-				-0.4
1,002,661	-				-0.2
1,002,661	-				-0.5
1,002,661	-				-1.0
1,002,800	+				+0.7
1,002,800	+				+0.4
1,002,917	+		AO356_04430	0.11	+0.1
1,002,977	+		AO356_04430	0.15	+0.3
1,002,977	+		AO356_04430	0.15	-1.1
1,002,977	+		AO356_04430	0.15	-0.0
1,002,977	+		AO356_04430	0.15	-1.1
1,002,977	+		AO356_04430	0.15	-0.3
1,003,004	+		AO356_04430	0.17	+0.0
1,003,004	+		AO356_04430	0.17	+1.4
1,003,004	+		AO356_04430	0.17	+1.5
1,003,037	+		AO356_04430	0.19	+0.4
1,003,037	+		AO356_04430	0.19	-0.3
1,003,037	+		AO356_04430	0.19	-1.0
1,003,037	+		AO356_04430	0.19	+0.1
1,003,038	-		AO356_04430	0.19	+0.9
1,003,038	-		AO356_04430	0.19	-0.0
1,003,038	-		AO356_04430	0.19	+0.5
1,003,112	+		AO356_04430	0.23	+0.4
1,003,202	+		AO356_04430	0.29	+0.6
1,003,203	-		AO356_04430	0.29	+1.6
1,003,203	-		AO356_04430	0.29	+0.4
1,003,227	-		AO356_04430	0.30	-2.3
1,003,499	+		AO356_04430	0.47	-0.3
1,003,500	-		AO356_04430	0.47	-0.3
1,003,626	+		AO356_04430	0.54	+0.7
1,003,627	-		AO356_04430	0.54	+0.3
1,003,627	-		AO356_04430	0.54	+1.4
1,003,629	-		AO356_04430	0.54	+0.5
1,003,784	+		AO356_04430	0.64	-0.6
1,003,785	-		AO356_04430	0.64	-0.1
1,003,785	-		AO356_04430	0.64	+0.3
1,003,805	+		AO356_04430	0.65	-1.4
1,003,805	+		AO356_04430	0.65	+0.7
1,003,805	+		AO356_04430	0.65	+0.3
1,003,805	+		AO356_04430	0.65	+0.6
1,003,805	+		AO356_04430	0.65	+0.1
1,003,806	-		AO356_04430	0.65	-0.5
1,003,806	-		AO356_04430	0.65	+0.5
1,003,806	-		AO356_04430	0.65	-1.5
1,003,806	-		AO356_04430	0.65	+0.1
1,003,846	-		AO356_04430	0.68	-0.1
1,003,871	+		AO356_04430	0.69	+0.3
1,003,871	+		AO356_04430	0.69	+0.4
1,003,871	+		AO356_04430	0.69	-1.7
1,003,872	-		AO356_04430	0.69	+0.6
1,003,872	-		AO356_04430	0.69	+0.2
1,003,872	-		AO356_04430	0.69	+0.5
1,003,872	-		AO356_04430	0.69	+0.5
1,003,872	-		AO356_04430	0.69	+0.2
1,003,929	+		AO356_04430	0.73	-0.4
1,003,929	+		AO356_04430	0.73	-1.7
1,003,929	+		AO356_04430	0.73	+0.4
1,003,930	-		AO356_04430	0.73	-2.0
1,003,960	+		AO356_04430	0.75	-0.4
1,004,013	+		AO356_04430	0.78	+0.2
1,004,014	-		AO356_04430	0.78	-0.0
1,004,014	-		AO356_04430	0.78	+0.9
1,004,014	-		AO356_04430	0.78	+1.5
1,004,015	+		AO356_04430	0.78	+1.2
1,004,101	+		AO356_04430	0.83	+0.2
1,004,101	+		AO356_04430	0.83	+0.3
1,004,123	+		AO356_04430	0.84	+1.0
1,004,124	-		AO356_04430	0.84	-0.6
1,004,367	+				-0.0
1,004,368	-				-0.4
1,004,371	-				-0.0
1,004,452	-				+3.7
1,004,520	+				-0.6
1,004,560	+				-0.2
1,004,629	+				-0.4
1,004,629	+				+0.0
1,004,629	+				+0.1
1,004,630	-				-0.1
1,004,630	-				-0.1
1,004,630	-				-0.1
1,004,737	+		AO356_04435	0.14	-0.2
1,004,738	-		AO356_04435	0.14	-0.6
1,004,738	-		AO356_04435	0.14	+0.4
1,004,781	+		AO356_04435	0.17	-0.2
1,004,781	+		AO356_04435	0.17	-0.4
1,004,781	+		AO356_04435	0.17	+0.1
1,004,782	-		AO356_04435	0.17	+0.1
1,004,782	-		AO356_04435	0.17	-0.1
1,004,782	-		AO356_04435	0.17	-0.4
1,004,782	-		AO356_04435	0.17	-0.1
1,004,824	+		AO356_04435	0.20	+0.7
1,004,825	-		AO356_04435	0.20	-0.1
1,004,825	-		AO356_04435	0.20	+0.3
1,004,849	+		AO356_04435	0.22	+0.4
1,004,849	+		AO356_04435	0.22	+0.3
1,004,849	+		AO356_04435	0.22	+2.9
1,004,850	-		AO356_04435	0.22	+0.7
1,004,850	-		AO356_04435	0.22	-0.8
1,004,850	-		AO356_04435	0.22	-0.6
1,004,850	-		AO356_04435	0.22	+0.3
1,004,944	+		AO356_04435	0.29	-1.0
1,004,944	+		AO356_04435	0.29	-0.4
1,004,944	+		AO356_04435	0.29	-0.4
1,004,944	+		AO356_04435	0.29	+0.9
1,005,286	+		AO356_04435	0.54	+0.0
1,005,337	+		AO356_04435	0.57	-0.8
1,005,338	-		AO356_04435	0.57	+1.8
1,005,338	-		AO356_04435	0.57	-0.1