Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04420

Experiment: Rifampicin 0.0024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0024 mg/ml
999,778	+		AO356_04410	0.39	+0.6
999,778	+		AO356_04410	0.39	+0.4
999,778	+		AO356_04410	0.39	+0.0
999,778	+		AO356_04410	0.39	+0.1
999,779	-		AO356_04410	0.39	-1.0
999,779	-		AO356_04410	0.39	+0.4
999,779	-		AO356_04410	0.39	-0.3
999,779	-		AO356_04410	0.39	-0.0
999,779	-		AO356_04410	0.39	+2.1
999,779	-		AO356_04410	0.39	+0.5
999,868	+		AO356_04410	0.48	+0.8
999,868	+		AO356_04410	0.48	-1.3
999,868	+		AO356_04410	0.48	+1.9
999,868	+		AO356_04410	0.48	-0.3
999,868	+		AO356_04410	0.48	+0.5
999,869	-		AO356_04410	0.48	-0.2
999,869	-		AO356_04410	0.48	-0.8
999,869	-		AO356_04410	0.48	+0.5
1,000,039	+		AO356_04410	0.67	-0.3
1,000,039	+		AO356_04410	0.67	-0.4
1,000,039	+		AO356_04410	0.67	+1.4
1,000,039	+		AO356_04410	0.67	-0.3
1,000,039	+		AO356_04410	0.67	+1.2
1,000,040	-		AO356_04410	0.67	+0.3
1,000,040	-		AO356_04410	0.67	-0.1
1,000,040	-		AO356_04410	0.67	+1.7
1,000,040	-		AO356_04410	0.67	-0.3
1,000,040	-		AO356_04410	0.67	+0.4
1,000,040	-		AO356_04410	0.67	+0.1
1,000,040	-		AO356_04410	0.67	+0.1
1,000,040	-		AO356_04410	0.67	+0.7
1,000,052	-		AO356_04410	0.68	+0.7
1,000,281	-				-1.2
1,000,312	+				+0.3
1,000,313	-				-0.2
1,000,313	-				-0.2
1,000,313	-				+0.4
1,000,313	-				+0.3
1,000,423	-				+0.5
1,000,423	-				+0.4
1,000,524	-		AO356_04415	0.17	-0.2
1,000,556	+		AO356_04415	0.28	-0.3
1,000,557	-		AO356_04415	0.28	-0.4
1,000,557	-		AO356_04415	0.28	+0.2
1,000,712	+		AO356_04415	0.81	+0.0
1,000,712	+		AO356_04415	0.81	+1.1
1,000,712	+		AO356_04415	0.81	-0.0
1,000,712	+		AO356_04415	0.81	-0.1
1,000,712	+		AO356_04415	0.81	+0.5
1,000,712	+		AO356_04415	0.81	+0.0
1,000,712	+		AO356_04415	0.81	+1.0
1,000,712	+		AO356_04415	0.81	-0.1
1,000,712	+		AO356_04415	0.81	-1.4
1,000,712	+		AO356_04415	0.81	-0.0
1,000,712	+		AO356_04415	0.81	+0.4
1,000,712	+		AO356_04415	0.81	-0.5
1,000,713	-		AO356_04415	0.81	-0.3
1,000,713	-		AO356_04415	0.81	-0.1
1,000,713	-		AO356_04415	0.81	+0.4
1,000,713	-		AO356_04415	0.81	+0.2
1,000,713	-		AO356_04415	0.81	+0.3
1,000,718	+		AO356_04415	0.83	+1.0
1,000,718	+		AO356_04415	0.83	+2.2
1,000,718	+		AO356_04415	0.83	+0.3
1,000,718	+		AO356_04415	0.83	-1.0
1,000,718	+		AO356_04415	0.83	+0.7
1,000,718	+		AO356_04415	0.83	+1.1
1,000,718	+		AO356_04415	0.83	+2.1
1,000,718	+		AO356_04415	0.83	-0.5
1,000,719	-		AO356_04415	0.83	+0.8
1,000,719	-		AO356_04415	0.83	-0.9
1,000,719	-		AO356_04415	0.83	-0.5
1,000,719	-		AO356_04415	0.83	-0.3
1,000,719	-		AO356_04415	0.83	+0.1
1,000,719	-		AO356_04415	0.83	+0.4
1,000,719	-		AO356_04415	0.83	-0.3
1,000,719	-		AO356_04415	0.83	-0.7
1,000,745	+				+0.1
1,000,746	-				-0.2
1,000,759	-				+0.3
1,001,254	-		AO356_04420	0.43	-2.8
1,001,254	-		AO356_04420	0.43	-1.2
1,001,400	+		AO356_04420	0.56	-2.7
1,001,401	-		AO356_04420	0.56	-0.8
1,001,441	-		AO356_04420	0.60	-1.1
1,001,539	+		AO356_04420	0.68	-1.2
1,001,927	+				-0.1
1,001,927	+				-1.2
1,001,927	+				+0.3
1,001,927	+				-1.0
1,001,927	+				-0.1
1,001,927	+				+0.7
1,001,927	+				-0.3
1,001,927	+				+0.2
1,001,927	+				-0.7
1,001,927	+				-1.4
1,001,927	+				-0.5
1,001,927	+				-0.7
1,001,928	-				+0.5
1,001,928	-				+0.4
1,001,928	-				-1.1
1,001,928	-				-0.0
1,001,928	-				+0.9
1,001,928	-				+0.4
1,001,928	-				-0.0
1,001,928	-				+0.1
1,001,928	-				+0.1
1,001,928	-				+0.5
1,001,928	-				-0.7
1,001,928	-				+1.0
1,001,928	-				-0.2
1,001,929	+				+2.0
1,001,929	+				+0.6
1,001,929	+				-0.9
1,001,929	+				-0.4
1,001,929	+				-1.9
1,001,929	+				+0.7
1,001,929	+				+0.1
1,001,929	+				+0.0
1,001,929	+				+0.4
1,001,929	+				-1.2
1,001,929	+				+0.6
1,001,929	+				-0.2
1,001,929	+				-0.6
1,001,929	+				-1.8
1,001,929	+				+0.2
1,001,930	-				-0.2
1,001,930	-				-1.0
1,001,930	-				+0.6
1,001,930	-				+0.3
1,001,930	-				-0.2
1,001,930	-				+0.9
1,001,930	-				-1.3
1,001,930	-				-0.1
1,001,930	-				-0.6
1,001,930	-				+0.0
1,001,930	-				-0.6
1,001,930	-				+0.0
1,001,931	+				-2.5
1,001,931	+				+0.4
1,001,931	+				-0.8
1,001,931	+				+0.4
1,001,931	+				+0.3
1,001,932	-				+0.7
1,001,959	+				-0.2
1,001,959	+				+0.1
1,001,959	+				-0.9
1,001,960	-				+0.8
1,001,960	-				+0.2
1,001,960	-				+0.9
1,001,960	-				-0.5
1,002,002	+				-0.4
1,002,002	+				-1.0
1,002,002	+				-0.4
1,002,002	+				-0.4
1,002,002	+				-0.3
1,002,002	+				+0.7
1,002,003	-				-0.3
1,002,003	-				-0.8
1,002,003	-				-0.2
1,002,003	-				-0.3
1,002,003	-				+1.0
1,002,008	+				-1.3
1,002,009	-				-0.3
1,002,009	-				-0.6
1,002,009	-				+1.6
1,002,009	-				-1.5
1,002,009	-				+0.1
1,002,030	+				+0.2
1,002,041	+				-0.3
1,002,041	+				+0.7
1,002,041	+				-0.7
1,002,041	+				-0.2
1,002,042	-				+0.6
1,002,042	-				-0.0
1,002,042	-				-0.2
1,002,291	+		AO356_04425	0.42	+0.3
1,002,291	+		AO356_04425	0.42	+0.5
1,002,291	+		AO356_04425	0.42	-0.6
1,002,291	+		AO356_04425	0.42	+0.5
1,002,292	-		AO356_04425	0.43	+0.1
1,002,292	-		AO356_04425	0.43	-1.2
1,002,292	-		AO356_04425	0.43	-0.2
1,002,292	-		AO356_04425	0.43	-2.8
1,002,451	+		AO356_04425	0.67	+0.1
1,002,660	+				+0.6
1,002,660	+				-0.4
1,002,660	+				+0.9
1,002,661	-				+0.1
1,002,661	-				+0.6
1,002,661	-				-0.4
1,002,661	-				-0.2
1,002,661	-				-0.5
1,002,661	-				-1.0
1,002,800	+				+0.7
1,002,800	+				+0.4