Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1624
Experiment: MoYLS4 with Ceftazidime 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Ceftazidime 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,001,369 | + | +0.6 | |||
2,001,396 | + | +1.3 | |||
2,001,447 | + | DvMF_1623 | 0.18 | -0.5 | |
2,001,678 | - | DvMF_1623 | 0.56 | +0.0 | |
2,001,694 | + | DvMF_1623 | 0.58 | -0.6 | |
2,001,701 | + | DvMF_1623 | 0.59 | -2.3 | |
2,001,747 | - | DvMF_1623 | 0.67 | -0.1 | |
2,001,788 | - | DvMF_1623 | 0.74 | +0.4 | |
2,002,422 | - | DvMF_1624 | 0.22 | -0.7 | |
2,002,467 | - | DvMF_1624 | 0.28 | -1.3 | |
2,002,675 | + | DvMF_1624 | 0.52 | -0.6 | |
2,002,751 | - | DvMF_1624 | 0.62 | -0.3 | |
2,002,769 | - | DvMF_1624 | 0.64 | -0.5 | |
2,002,854 | + | DvMF_1624 | 0.74 | -0.4 | |
2,002,860 | - | DvMF_1624 | 0.75 | -0.6 | |
2,002,860 | - | DvMF_1624 | 0.75 | -0.5 | |
2,003,068 | + | +0.4 | |||
2,003,344 | - | DvMF_1625 | 0.17 | -0.2 | |
2,003,725 | - | DvMF_1625 | 0.39 | -0.4 | |
2,003,735 | - | DvMF_1625 | 0.40 | -0.2 | |
2,003,746 | - | DvMF_1625 | 0.40 | +0.0 | |
2,003,812 | + | DvMF_1625 | 0.44 | -0.5 | |
2,003,820 | - | DvMF_1625 | 0.45 | -1.0 | |
2,003,846 | - | DvMF_1625 | 0.46 | -0.7 | |
2,003,884 | - | DvMF_1625 | 0.49 | +0.1 | |
2,003,966 | - | DvMF_1625 | 0.53 | -1.0 | |
2,003,989 | - | DvMF_1625 | 0.55 | -0.3 |
Or see this region's nucleotide sequence