Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1208

Experiment: MoYLS4 with Ceftazidime 0.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_1206 and DvMF_1207 are separated by 23 nucleotidesDvMF_1207 and DvMF_1208 are separated by 196 nucleotidesDvMF_1208 and DvMF_1209 are separated by 287 nucleotides DvMF_1206: DvMF_1206 - hypothetical protein (RefSeq), at 1,485,341 to 1,485,937 _1206 DvMF_1207: DvMF_1207 - transcriptional regulator, ArsR family (RefSeq), at 1,485,961 to 1,486,482 _1207 DvMF_1208: DvMF_1208 - CheW protein (RefSeq), at 1,486,679 to 1,487,218 _1208 DvMF_1209: DvMF_1209 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 1,487,506 to 1,489,485 _1209 Position (kb) 1486 1487 1488Strain fitness (log2 ratio) -1 0 1at 1486.679 kb on - strandat 1487.629 kb on - strandat 1487.629 kb on - strandat 1487.899 kb on - strand, within DvMF_1209at 1487.901 kb on + strand, within DvMF_1209

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Ceftazidime 0.5 mg/ml
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1,486,679 - -0.4
1,487,629 - -0.2
1,487,629 - -0.4
1,487,899 - DvMF_1209 0.20 -0.3
1,487,901 + DvMF_1209 0.20 -0.8

Or see this region's nucleotide sequence