Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0840
Experiment: MoYLS4 with Ceftazidime 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Ceftazidime 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,014,018 | + | DvMF_0839 | 0.74 | +1.3 | |
1,014,065 | + | DvMF_0839 | 0.79 | -0.5 | |
1,014,080 | - | DvMF_0839 | 0.80 | -0.6 | |
1,014,133 | - | DvMF_0839 | 0.85 | -0.9 | |
1,014,698 | - | DvMF_0840 | 0.12 | -1.0 | |
1,014,893 | + | DvMF_0840 | 0.22 | -0.8 | |
1,014,893 | + | DvMF_0840 | 0.22 | -1.0 | |
1,015,237 | + | DvMF_0840 | 0.40 | -1.6 | |
1,015,502 | - | DvMF_0840 | 0.53 | -1.3 | |
1,015,509 | + | DvMF_0840 | 0.54 | -1.6 | |
1,015,530 | + | DvMF_0840 | 0.55 | -0.1 | |
1,015,733 | + | DvMF_0840 | 0.65 | -2.8 | |
1,015,765 | - | DvMF_0840 | 0.67 | -0.9 | |
1,015,833 | + | DvMF_0840 | 0.70 | -0.1 | |
1,016,069 | - | DvMF_0840 | 0.83 | -1.6 | |
1,016,296 | - | -1.8 | |||
1,016,338 | + | -0.4 | |||
1,016,463 | - | -0.3 | |||
1,016,670 | - | DvMF_0841 | 0.13 | -0.6 | |
1,016,942 | - | DvMF_0841 | 0.32 | -0.7 | |
1,016,951 | - | DvMF_0841 | 0.32 | -1.2 | |
1,017,117 | - | DvMF_0841 | 0.43 | -0.8 | |
1,017,397 | + | DvMF_0841 | 0.63 | -0.5 |
Or see this region's nucleotide sequence