Experiment: MoYLS4 with Ceftazidime 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0773 and DvMF_0774 are separated by 87 nucleotides DvMF_0774 and DvMF_0775 are separated by 159 nucleotides DvMF_0775 and DvMF_0776 are separated by 10 nucleotides
DvMF_0773: DvMF_0773 - hypothetical protein (RefSeq), at 927,019 to 927,975
_0773
DvMF_0774: DvMF_0774 - CheA signal transduction histidine kinase (RefSeq), at 928,063 to 931,155
_0774
DvMF_0775: DvMF_0775 - response regulator receiver protein (RefSeq), at 931,315 to 931,683
_0775
DvMF_0776: DvMF_0776 - CheW protein (RefSeq), at 931,694 to 932,380
_0776
Position (kb) 928
929
930
931
932 Strain fitness (log2 ratio) -1
0
1
2 at 928.433 kb on + strand, within DvMF_0774 at 928.438 kb on + strand, within DvMF_0774 at 928.778 kb on + strand, within DvMF_0774 at 929.354 kb on + strand, within DvMF_0774 at 929.435 kb on + strand, within DvMF_0774 at 929.475 kb on + strand, within DvMF_0774 at 929.543 kb on + strand, within DvMF_0774 at 929.801 kb on - strand, within DvMF_0774 at 929.835 kb on - strand, within DvMF_0774 at 930.272 kb on - strand, within DvMF_0774 at 930.503 kb on - strand, within DvMF_0774 at 930.533 kb on - strand, within DvMF_0774 at 930.535 kb on - strand, within DvMF_0774 at 930.839 kb on - strand, within DvMF_0774 at 930.917 kb on - strand at 931.168 kb on + strand at 931.445 kb on - strand, within DvMF_0775 at 931.607 kb on - strand, within DvMF_0775 at 931.646 kb on + strand, within DvMF_0775 at 931.838 kb on + strand, within DvMF_0776 at 932.004 kb on - strand, within DvMF_0776 at 932.062 kb on - strand, within DvMF_0776
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ceftazidime 0.5 mg/ml remove 928,433 + DvMF_0774 0.12 +2.6 928,438 + DvMF_0774 0.12 +1.4 928,778 + DvMF_0774 0.23 +0.2 929,354 + DvMF_0774 0.42 +1.3 929,435 + DvMF_0774 0.44 +1.7 929,475 + DvMF_0774 0.46 +1.4 929,543 + DvMF_0774 0.48 +0.7 929,801 - DvMF_0774 0.56 +0.7 929,835 - DvMF_0774 0.57 +0.7 930,272 - DvMF_0774 0.71 +1.2 930,503 - DvMF_0774 0.79 +0.6 930,533 - DvMF_0774 0.80 +1.7 930,535 - DvMF_0774 0.80 +0.7 930,839 - DvMF_0774 0.90 +1.4 930,917 - +2.1 931,168 + +0.1 931,445 - DvMF_0775 0.35 +0.3 931,607 - DvMF_0775 0.79 -0.3 931,646 + DvMF_0775 0.90 +0.2 931,838 + DvMF_0776 0.21 -0.0 932,004 - DvMF_0776 0.45 +1.5 932,062 - DvMF_0776 0.54 +1.4
Or see this region's nucleotide sequence