Experiment: MoYLS4 with Ceftazidime 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0673 and DvMF_0674 overlap by 4 nucleotides DvMF_0674 and DvMF_0675 are separated by 69 nucleotides DvMF_0675 and DvMF_0676 are separated by 10 nucleotides
DvMF_0673: DvMF_0673 - glycosyl transferase group 1 (RefSeq), at 812,757 to 813,872
_0673
DvMF_0674: DvMF_0674 - hypothetical protein (RefSeq), at 813,869 to 814,453
_0674
DvMF_0675: DvMF_0675 - Acetyltransferase (isoleucine patch superfamily)-like protein (RefSeq), at 814,523 to 815,326
_0675
DvMF_0676: DvMF_0676 - glycosyl transferase group 1 (RefSeq), at 815,337 to 816,461
_0676
Position (kb) 813
814
815 Strain fitness (log2 ratio) -1
0
1 at 812.905 kb on + strand, within DvMF_0673 at 813.040 kb on + strand, within DvMF_0673 at 813.068 kb on + strand, within DvMF_0673 at 813.124 kb on + strand, within DvMF_0673 at 813.255 kb on + strand, within DvMF_0673 at 813.255 kb on + strand, within DvMF_0673 at 813.412 kb on - strand, within DvMF_0673 at 813.541 kb on + strand, within DvMF_0673 at 813.544 kb on - strand, within DvMF_0673 at 813.596 kb on + strand, within DvMF_0673 at 813.636 kb on + strand, within DvMF_0673 at 813.674 kb on - strand, within DvMF_0673 at 813.727 kb on - strand, within DvMF_0673 at 813.744 kb on - strand at 813.748 kb on + strand, within DvMF_0673 at 813.802 kb on - strand at 814.060 kb on + strand, within DvMF_0674 at 814.185 kb on - strand, within DvMF_0674 at 814.310 kb on + strand, within DvMF_0674 at 814.337 kb on - strand, within DvMF_0674 at 814.393 kb on + strand, within DvMF_0674 at 814.544 kb on + strand at 814.679 kb on - strand, within DvMF_0675
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ceftazidime 0.5 mg/ml remove 812,905 + DvMF_0673 0.13 -0.3 813,040 + DvMF_0673 0.25 -0.3 813,068 + DvMF_0673 0.28 -1.1 813,124 + DvMF_0673 0.33 -0.9 813,255 + DvMF_0673 0.45 -0.6 813,255 + DvMF_0673 0.45 -0.5 813,412 - DvMF_0673 0.59 -0.2 813,541 + DvMF_0673 0.70 -0.2 813,544 - DvMF_0673 0.71 -0.8 813,596 + DvMF_0673 0.75 -0.2 813,636 + DvMF_0673 0.79 -0.6 813,674 - DvMF_0673 0.82 -0.2 813,727 - DvMF_0673 0.87 -1.7 813,744 - -0.3 813,748 + DvMF_0673 0.89 -1.2 813,802 - +0.0 814,060 + DvMF_0674 0.33 -0.3 814,185 - DvMF_0674 0.54 -1.0 814,310 + DvMF_0674 0.75 -0.4 814,337 - DvMF_0674 0.80 -0.5 814,393 + DvMF_0674 0.90 -0.4 814,544 + -0.4 814,679 - DvMF_0675 0.19 -0.4
Or see this region's nucleotide sequence