Experiment: MoYLS4 with Ceftazidime 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0670 and DvMF_0671 overlap by 26 nucleotides DvMF_0671 and DvMF_0672 are separated by 6 nucleotides DvMF_0672 and DvMF_0673 are separated by 64 nucleotides
DvMF_0670: DvMF_0670 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 809,764 to 811,125
_0670
DvMF_0671: DvMF_0671 - EpsI family protein (RefSeq), at 811,100 to 811,831
_0671
DvMF_0672: DvMF_0672 - eight transmembrane protein EpsH (RefSeq), at 811,838 to 812,692
_0672
DvMF_0673: DvMF_0673 - glycosyl transferase group 1 (RefSeq), at 812,757 to 813,872
_0673
Position (kb) 811
812 Strain fitness (log2 ratio) -2
-1
0
1 at 810.371 kb on + strand, within DvMF_0670 at 810.508 kb on + strand, within DvMF_0670 at 810.549 kb on - strand, within DvMF_0670 at 810.558 kb on + strand, within DvMF_0670 at 810.566 kb on - strand, within DvMF_0670 at 810.789 kb on + strand, within DvMF_0670 at 811.003 kb on + strand at 811.080 kb on - strand at 811.588 kb on - strand, within DvMF_0671 at 811.690 kb on + strand, within DvMF_0671 at 811.700 kb on + strand, within DvMF_0671 at 811.826 kb on - strand at 811.834 kb on + strand at 811.879 kb on - strand at 811.896 kb on - strand at 811.909 kb on - strand at 812.104 kb on + strand, within DvMF_0672 at 812.152 kb on + strand, within DvMF_0672 at 812.244 kb on + strand, within DvMF_0672 at 812.272 kb on - strand, within DvMF_0672 at 812.283 kb on + strand, within DvMF_0672 at 812.283 kb on + strand, within DvMF_0672 at 812.291 kb on - strand, within DvMF_0672 at 812.291 kb on - strand, within DvMF_0672 at 812.291 kb on - strand, within DvMF_0672 at 812.291 kb on - strand, within DvMF_0672 at 812.421 kb on - strand, within DvMF_0672 at 812.480 kb on - strand, within DvMF_0672 at 812.613 kb on + strand at 812.771 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ceftazidime 0.5 mg/ml remove 810,371 + DvMF_0670 0.45 -0.1 810,508 + DvMF_0670 0.55 -0.4 810,549 - DvMF_0670 0.58 -0.5 810,558 + DvMF_0670 0.58 -0.2 810,566 - DvMF_0670 0.59 -0.1 810,789 + DvMF_0670 0.75 -0.0 811,003 + -0.1 811,080 - -0.6 811,588 - DvMF_0671 0.67 +0.4 811,690 + DvMF_0671 0.81 +0.1 811,700 + DvMF_0671 0.82 -0.3 811,826 - -0.2 811,834 + -0.9 811,879 - +0.2 811,896 - -0.9 811,909 - -0.3 812,104 + DvMF_0672 0.31 -0.9 812,152 + DvMF_0672 0.37 -2.3 812,244 + DvMF_0672 0.47 -1.4 812,272 - DvMF_0672 0.51 -0.0 812,283 + DvMF_0672 0.52 -0.7 812,283 + DvMF_0672 0.52 -1.1 812,291 - DvMF_0672 0.53 -0.3 812,291 - DvMF_0672 0.53 -2.0 812,291 - DvMF_0672 0.53 -0.6 812,291 - DvMF_0672 0.53 -0.6 812,421 - DvMF_0672 0.68 -1.4 812,480 - DvMF_0672 0.75 +0.3 812,613 + +0.2 812,771 + -0.6
Or see this region's nucleotide sequence