Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3395

Experiment: m.b. Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.015 mg/ml
3,572,091	-				-0.3
3,572,098	+				-0.0
3,572,181	+		Dshi_3394	0.16	+0.4
3,572,223	-		Dshi_3394	0.20	+0.3
3,572,244	+		Dshi_3394	0.22	+0.7
3,572,245	-		Dshi_3394	0.22	+0.6
3,572,256	+		Dshi_3394	0.23	-0.2
3,572,326	+		Dshi_3394	0.30	-0.3
3,572,347	-		Dshi_3394	0.32	-0.3
3,572,480	-		Dshi_3394	0.45	-2.2
3,572,579	-		Dshi_3394	0.55	-0.0
3,572,712	-		Dshi_3394	0.68	-0.6
3,572,727	+		Dshi_3394	0.70	-0.2
3,572,768	-		Dshi_3394	0.74	-0.3
3,572,788	+		Dshi_3394	0.76	-0.5
3,572,847	+		Dshi_3394	0.82	+0.1
3,572,855	-		Dshi_3394	0.82	+0.9
3,572,912	+		Dshi_3394	0.88	+0.0
3,573,039	-				-0.2
3,573,047	+				-0.3
3,573,055	-				-0.0
3,573,126	-				+0.1
3,573,151	+				+0.6
3,573,193	-				+0.5
3,573,196	-				+1.1
3,573,198	+				+0.3
3,573,250	+		Dshi_3395	0.11	-0.2
3,573,307	+		Dshi_3395	0.15	+0.2
3,573,355	+		Dshi_3395	0.19	-0.4
3,573,360	+		Dshi_3395	0.19	-0.7
3,573,363	-		Dshi_3395	0.19	-0.5
3,573,475	-		Dshi_3395	0.27	+0.4
3,573,478	+		Dshi_3395	0.27	-0.8
3,573,500	-		Dshi_3395	0.29	-0.5
3,573,500	-		Dshi_3395	0.29	+0.1
3,573,508	+		Dshi_3395	0.29	-0.0
3,573,583	-		Dshi_3395	0.34	-0.1
3,573,595	-		Dshi_3395	0.35	-0.4
3,573,602	-		Dshi_3395	0.36	-0.6
3,573,628	-		Dshi_3395	0.37	+1.2
3,573,628	-		Dshi_3395	0.37	-0.0
3,573,692	-		Dshi_3395	0.42	+1.6
3,573,704	-		Dshi_3395	0.43	+0.2
3,573,735	-		Dshi_3395	0.45	+0.5
3,573,774	-		Dshi_3395	0.48	-0.2
3,573,803	+		Dshi_3395	0.50	-0.5
3,573,816	-		Dshi_3395	0.50	-0.5
3,573,826	-		Dshi_3395	0.51	+0.1
3,573,830	+		Dshi_3395	0.51	-0.5
3,573,835	+		Dshi_3395	0.52	-1.2
3,573,835	+		Dshi_3395	0.52	+0.1
3,573,848	-		Dshi_3395	0.53	-0.6
3,573,887	+		Dshi_3395	0.55	-0.4
3,573,902	+		Dshi_3395	0.56	-0.1
3,573,902	+		Dshi_3395	0.56	+0.1
3,573,902	+		Dshi_3395	0.56	-1.0
3,573,910	-		Dshi_3395	0.57	-1.5
3,573,910	-		Dshi_3395	0.57	+0.1
3,574,028	-		Dshi_3395	0.65	+0.4
3,574,033	-		Dshi_3395	0.65	-0.3
3,574,061	+		Dshi_3395	0.67	-0.4
3,574,080	-		Dshi_3395	0.69	-0.1
3,574,096	+		Dshi_3395	0.70	+1.0
3,574,133	+		Dshi_3395	0.72	+0.8
3,574,173	+		Dshi_3395	0.75	-0.0
3,574,181	-		Dshi_3395	0.76	+0.5
3,574,194	+		Dshi_3395	0.77	+0.1
3,574,197	-		Dshi_3395	0.77	-1.3
3,574,199	+		Dshi_3395	0.77	+0.6
3,574,207	-		Dshi_3395	0.77	-0.5
3,574,358	+		Dshi_3395	0.88	-0.3
3,574,409	+				-0.4
3,574,410	+				+0.6
3,574,413	-				-0.6
3,574,421	+				-0.2
3,574,421	-				+0.3
3,574,428	-				+0.2
3,574,499	+				+0.7
3,574,499	+				+1.2
3,574,513	-				-1.0
3,574,554	+				-0.3
3,574,572	+				-0.0
3,574,573	+				-0.2
3,574,617	-				-0.6
3,574,627	-		Dshi_3396	0.11	+0.8
3,574,632	+		Dshi_3396	0.12	-0.4
3,574,632	+		Dshi_3396	0.12	-1.2
3,574,637	+		Dshi_3396	0.12	-1.2
3,574,724	-		Dshi_3396	0.23	+0.4
3,574,775	+		Dshi_3396	0.30	+0.5
3,574,828	+		Dshi_3396	0.36	-0.9
3,574,833	+		Dshi_3396	0.37	+0.2
3,574,833	+		Dshi_3396	0.37	-0.3
3,574,845	+		Dshi_3396	0.38	-1.1
3,574,902	+		Dshi_3396	0.45	-0.5
3,574,919	-		Dshi_3396	0.48	-0.6
3,574,919	-		Dshi_3396	0.48	-2.0
3,574,955	+		Dshi_3396	0.52	+0.5
3,574,955	+		Dshi_3396	0.52	-0.1
3,574,955	+		Dshi_3396	0.52	-0.3
3,574,955	+		Dshi_3396	0.52	+0.6
3,574,963	-		Dshi_3396	0.53	+1.2
3,574,973	+		Dshi_3396	0.54	-2.0
3,575,011	-		Dshi_3396	0.59	+0.5
3,575,085	-		Dshi_3396	0.68	-0.2
3,575,105	-		Dshi_3396	0.71	+0.2
3,575,105	-		Dshi_3396	0.71	+0.3
3,575,118	+		Dshi_3396	0.72	+0.6
3,575,118	+		Dshi_3396	0.72	-0.1
3,575,126	-		Dshi_3396	0.73	+0.2
3,575,126	-		Dshi_3396	0.73	-0.7
3,575,156	+		Dshi_3396	0.77	+0.4
3,575,167	+		Dshi_3396	0.78	-1.0
3,575,167	+		Dshi_3396	0.78	+0.1
3,575,172	+		Dshi_3396	0.79	-1.0
3,575,175	-		Dshi_3396	0.79	+0.7
3,575,175	-		Dshi_3396	0.79	-0.6
3,575,204	-		Dshi_3396	0.83	+1.0
3,575,281	-				-1.4
3,575,296	-				+0.4
3,575,307	-				-0.4
3,575,335	+				+0.8
3,575,365	+				+0.2
3,575,371	-				+0.1
3,575,400	-				+0.6
3,575,439	-				+1.3
3,575,440	-				+0.3
3,575,456	-				-0.3
3,575,463	+				+1.0
3,575,465	+				-0.7
3,575,470	+				-2.3
3,575,471	+				-0.0