Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2216

Experiment: m.b. Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.015 mg/ml
2,340,472	-		Dshi_2214	0.42	-0.0
2,340,497	+		Dshi_2214	0.49	+0.6
2,340,505	-		Dshi_2214	0.52	+1.1
2,340,564	+		Dshi_2214	0.69	+1.0
2,340,612	+		Dshi_2214	0.84	+0.3
2,340,672	+				-0.2
2,340,696	+				+0.1
2,340,704	-				+0.9
2,340,777	+		Dshi_2215	0.16	+0.6
2,340,780	-		Dshi_2215	0.16	-0.0
2,340,820	+		Dshi_2215	0.22	-1.0
2,340,820	+		Dshi_2215	0.22	-0.2
2,340,893	+		Dshi_2215	0.33	+0.2
2,340,893	+		Dshi_2215	0.33	+0.3
2,340,901	-		Dshi_2215	0.34	-0.2
2,340,998	-		Dshi_2215	0.49	-0.4
2,341,024	-		Dshi_2215	0.53	+0.2
2,341,048	+		Dshi_2215	0.56	+0.0
2,341,058	+		Dshi_2215	0.58	-0.2
2,341,066	-		Dshi_2215	0.59	+0.0
2,341,083	-		Dshi_2215	0.62	+0.7
2,341,129	-		Dshi_2215	0.69	+0.0
2,341,137	+		Dshi_2215	0.70	+1.0
2,341,162	+		Dshi_2215	0.74	-0.2
2,341,200	+		Dshi_2215	0.79	+0.8
2,341,208	-		Dshi_2215	0.81	+0.2
2,341,245	+		Dshi_2215	0.86	-1.0
2,341,278	-				-0.4
2,341,319	-				-0.2
2,341,340	-				-0.4
2,341,371	+				-0.4
2,341,436	+				+0.3
2,341,470	+				+0.6
2,341,499	-				+0.8
2,341,503	-				+0.1
2,341,561	+		Dshi_2216	0.17	-0.3
2,341,574	+		Dshi_2216	0.19	-0.4
2,341,650	-		Dshi_2216	0.31	+0.2
2,341,650	-		Dshi_2216	0.31	-0.1
2,341,652	+		Dshi_2216	0.32	+0.5
2,341,660	-		Dshi_2216	0.33	-0.5
2,341,698	+		Dshi_2216	0.39	+0.5
2,341,698	+		Dshi_2216	0.39	-0.1
2,341,764	+		Dshi_2216	0.49	+0.5
2,342,059	-				-3.0
2,342,134	+				-0.0
2,342,189	-		Dshi_2217	0.18	-1.0
2,342,203	-		Dshi_2217	0.24	-2.0
2,342,233	+		Dshi_2217	0.36	-0.0
2,342,517	+				+0.6
2,342,569	-				+1.3
2,342,603	+				+1.3
2,342,603	+				+0.5
2,342,689	+				+0.1
2,342,689	+				-0.1
2,342,689	+				+0.4
2,342,689	+				-0.2
2,342,770	-				+1.1
2,342,873	+				+0.7
2,342,886	-				+0.4
2,342,894	-				+0.0
2,342,935	-				-0.5
2,342,944	-				+0.4
2,342,952	-				+0.9
2,342,952	-				+2.1
2,342,952	-				-0.7
2,342,965	+				+1.0
2,343,000	+				+1.2
2,343,057	+				+0.0
2,343,057	+				+0.5