Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1044
Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Paraquat dichloride 0.015 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,077,404 | - | Dshi_1043 | 0.56 | -0.4 | |
1,077,627 | + | Dshi_1043 | 0.78 | +0.5 | |
1,077,700 | - | Dshi_1043 | 0.85 | -0.7 | |
1,077,784 | - | +0.2 | |||
1,077,856 | + | +0.1 | |||
1,077,857 | - | +0.3 | |||
1,077,907 | - | -1.8 | |||
1,077,965 | + | -0.4 | |||
1,077,965 | + | +0.5 | |||
1,078,232 | + | +0.7 | |||
1,078,270 | + | -0.4 | |||
1,078,334 | + | -1.8 | |||
1,078,342 | - | -0.7 | |||
1,078,556 | - | Dshi_1044 | 0.29 | -0.2 | |
1,078,612 | - | Dshi_1044 | 0.37 | -0.5 | |
1,078,630 | - | Dshi_1044 | 0.40 | +1.2 | |
1,078,679 | - | Dshi_1044 | 0.47 | +0.7 | |
1,078,735 | + | Dshi_1044 | 0.55 | +0.4 | |
1,078,803 | - | Dshi_1044 | 0.64 | +2.3 | |
1,078,933 | + | Dshi_1044 | 0.83 | +0.2 | |
1,078,978 | + | Dshi_1044 | 0.89 | +0.6 | |
1,079,034 | + | -0.2 | |||
1,079,246 | + | Dshi_1045 | 0.23 | +0.6 | |
1,079,782 | + | Dshi_1045 | 0.86 | +0.3 | |
1,079,795 | + | Dshi_1045 | 0.88 | -0.3 | |
1,079,802 | + | Dshi_1045 | 0.89 | -0.0 | |
1,079,949 | + | +0.9 | |||
1,079,956 | + | -0.4 |
Or see this region's nucleotide sequence