Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0930 and Dshi_0931 are separated by 30 nucleotides Dshi_0931 and Dshi_0932 are separated by 13 nucleotides
Dshi_0930: Dshi_0930 - sodium/hydrogen exchanger (RefSeq), at 953,550 to 955,277
_0930
Dshi_0931: Dshi_0931 - Alcohol dehydrogenase GroES domain protein (RefSeq), at 955,308 to 956,327
_0931
Dshi_0932: Dshi_0932 - ATPase, P-type (transporting), HAD superfamily, subfamily IC (RefSeq), at 956,341 to 959,109
_0932
Position (kb) 955
956
957 Strain fitness (log2 ratio) -2
-1
0
1
2 at 954.310 kb on - strand, within Dshi_0930 at 954.583 kb on - strand, within Dshi_0930 at 954.603 kb on - strand, within Dshi_0930 at 954.608 kb on + strand, within Dshi_0930 at 954.793 kb on + strand, within Dshi_0930 at 954.831 kb on + strand, within Dshi_0930 at 954.837 kb on - strand, within Dshi_0930 at 954.905 kb on - strand, within Dshi_0930 at 954.971 kb on - strand, within Dshi_0930 at 954.971 kb on - strand, within Dshi_0930 at 954.987 kb on - strand, within Dshi_0930 at 955.016 kb on + strand, within Dshi_0930 at 955.016 kb on + strand, within Dshi_0930 at 955.018 kb on - strand, within Dshi_0930 at 955.061 kb on - strand, within Dshi_0930 at 955.306 kb on - strand at 955.341 kb on + strand at 955.341 kb on + strand at 955.383 kb on + strand at 955.445 kb on + strand, within Dshi_0931 at 955.463 kb on + strand, within Dshi_0931 at 955.537 kb on - strand, within Dshi_0931 at 955.558 kb on - strand, within Dshi_0931 at 955.571 kb on + strand, within Dshi_0931 at 955.581 kb on - strand, within Dshi_0931 at 955.602 kb on - strand, within Dshi_0931 at 955.629 kb on - strand, within Dshi_0931 at 955.680 kb on - strand, within Dshi_0931 at 955.704 kb on + strand, within Dshi_0931 at 955.815 kb on + strand, within Dshi_0931 at 955.845 kb on - strand, within Dshi_0931 at 955.870 kb on + strand, within Dshi_0931 at 955.937 kb on - strand, within Dshi_0931 at 955.942 kb on + strand, within Dshi_0931 at 955.952 kb on - strand, within Dshi_0931 at 956.169 kb on - strand, within Dshi_0931 at 956.267 kb on + strand at 956.346 kb on + strand at 956.378 kb on - strand at 956.378 kb on - strand at 956.446 kb on + strand at 956.496 kb on + strand at 956.537 kb on + strand at 956.657 kb on + strand, within Dshi_0932 at 956.689 kb on - strand, within Dshi_0932 at 956.706 kb on - strand, within Dshi_0932 at 956.725 kb on + strand, within Dshi_0932 at 956.733 kb on - strand, within Dshi_0932 at 956.733 kb on - strand, within Dshi_0932 at 956.835 kb on - strand, within Dshi_0932 at 956.841 kb on - strand, within Dshi_0932
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 954,310 - Dshi_0930 0.44 -1.2 954,583 - Dshi_0930 0.60 -0.2 954,603 - Dshi_0930 0.61 +0.1 954,608 + Dshi_0930 0.61 +0.4 954,793 + Dshi_0930 0.72 +0.3 954,831 + Dshi_0930 0.74 +2.2 954,837 - Dshi_0930 0.74 -0.0 954,905 - Dshi_0930 0.78 -0.1 954,971 - Dshi_0930 0.82 -0.0 954,971 - Dshi_0930 0.82 +0.1 954,987 - Dshi_0930 0.83 +0.3 955,016 + Dshi_0930 0.85 -0.2 955,016 + Dshi_0930 0.85 -0.1 955,018 - Dshi_0930 0.85 +0.6 955,061 - Dshi_0930 0.87 +0.6 955,306 - -0.0 955,341 + +0.3 955,341 + -2.1 955,383 + -0.8 955,445 + Dshi_0931 0.13 -1.9 955,463 + Dshi_0931 0.15 -0.7 955,537 - Dshi_0931 0.22 -0.2 955,558 - Dshi_0931 0.25 -0.4 955,571 + Dshi_0931 0.26 -1.0 955,581 - Dshi_0931 0.27 -0.9 955,602 - Dshi_0931 0.29 -0.7 955,629 - Dshi_0931 0.31 -0.6 955,680 - Dshi_0931 0.36 -0.9 955,704 + Dshi_0931 0.39 +0.2 955,815 + Dshi_0931 0.50 +0.5 955,845 - Dshi_0931 0.53 +0.2 955,870 + Dshi_0931 0.55 -0.2 955,937 - Dshi_0931 0.62 -0.1 955,942 + Dshi_0931 0.62 -0.2 955,952 - Dshi_0931 0.63 +0.3 956,169 - Dshi_0931 0.84 +0.3 956,267 + -1.1 956,346 + +0.3 956,378 - +0.6 956,378 - +0.4 956,446 + -0.2 956,496 + +0.3 956,537 + +0.8 956,657 + Dshi_0932 0.11 -0.1 956,689 - Dshi_0932 0.13 +0.8 956,706 - Dshi_0932 0.13 -0.8 956,725 + Dshi_0932 0.14 +0.5 956,733 - Dshi_0932 0.14 -1.1 956,733 - Dshi_0932 0.14 -1.4 956,835 - Dshi_0932 0.18 -0.1 956,841 - Dshi_0932 0.18 -0.5
Or see this region's nucleotide sequence