Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0661 and Dshi_0662 are separated by 14 nucleotides Dshi_0662 and Dshi_0663 are separated by 12 nucleotides Dshi_0663 and Dshi_0664 overlap by 4 nucleotides
Dshi_0661: Dshi_0661 - cytochrome c oxidase, cbb3-type, subunit I (RefSeq), at 665,449 to 667,050
_0661
Dshi_0662: Dshi_0662 - cytochrome c oxidase, cbb3-type, subunit II (RefSeq), at 667,065 to 667,790
_0662
Dshi_0663: Dshi_0663 - Cbb3-type cytochrome oxidase component (RefSeq), at 667,803 to 668,036
_0663
Dshi_0664: Dshi_0664 - cytochrome c oxidase, cbb3-type, subunit III (RefSeq), at 668,033 to 668,896
_0664
Position (kb) 667
668 Strain fitness (log2 ratio) -1
0
1
2
3 at 666.187 kb on + strand, within Dshi_0661 at 666.263 kb on - strand, within Dshi_0661 at 666.283 kb on + strand, within Dshi_0661 at 666.417 kb on - strand, within Dshi_0661 at 666.509 kb on - strand, within Dshi_0661 at 666.650 kb on + strand, within Dshi_0661 at 666.654 kb on + strand, within Dshi_0661 at 666.749 kb on + strand, within Dshi_0661 at 666.772 kb on - strand, within Dshi_0661 at 666.827 kb on - strand, within Dshi_0661 at 666.828 kb on + strand, within Dshi_0661 at 666.838 kb on + strand, within Dshi_0661 at 666.846 kb on - strand, within Dshi_0661 at 666.939 kb on - strand at 666.953 kb on - strand at 666.953 kb on - strand at 667.004 kb on + strand at 667.081 kb on + strand at 667.081 kb on + strand at 667.172 kb on + strand, within Dshi_0662 at 667.185 kb on - strand, within Dshi_0662 at 667.248 kb on + strand at 667.255 kb on - strand, within Dshi_0662 at 667.317 kb on - strand, within Dshi_0662 at 667.350 kb on + strand, within Dshi_0662 at 667.407 kb on - strand, within Dshi_0662 at 667.414 kb on - strand, within Dshi_0662 at 667.418 kb on + strand, within Dshi_0662 at 667.576 kb on - strand, within Dshi_0662 at 667.581 kb on - strand, within Dshi_0662 at 667.613 kb on + strand, within Dshi_0662 at 667.690 kb on - strand, within Dshi_0662 at 667.807 kb on - strand at 667.886 kb on + strand, within Dshi_0663 at 667.894 kb on - strand, within Dshi_0663 at 667.988 kb on + strand, within Dshi_0663 at 668.023 kb on - strand at 668.030 kb on + strand at 668.110 kb on - strand at 668.158 kb on - strand, within Dshi_0664 at 668.167 kb on + strand, within Dshi_0664 at 668.277 kb on - strand, within Dshi_0664 at 668.277 kb on - strand, within Dshi_0664 at 668.352 kb on - strand, within Dshi_0664 at 668.378 kb on + strand, within Dshi_0664 at 668.391 kb on + strand, within Dshi_0664 at 668.409 kb on + strand, within Dshi_0664 at 668.409 kb on - strand, within Dshi_0664 at 668.436 kb on + strand, within Dshi_0664 at 668.461 kb on + strand, within Dshi_0664 at 668.461 kb on + strand, within Dshi_0664 at 668.602 kb on - strand, within Dshi_0664 at 668.606 kb on + strand, within Dshi_0664 at 668.699 kb on - strand, within Dshi_0664
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 666,187 + Dshi_0661 0.46 -1.1 666,263 - Dshi_0661 0.51 +0.2 666,283 + Dshi_0661 0.52 -0.0 666,417 - Dshi_0661 0.60 +0.5 666,509 - Dshi_0661 0.66 +1.2 666,650 + Dshi_0661 0.75 +2.3 666,654 + Dshi_0661 0.75 -0.3 666,749 + Dshi_0661 0.81 +3.7 666,772 - Dshi_0661 0.83 +1.0 666,827 - Dshi_0661 0.86 +0.7 666,828 + Dshi_0661 0.86 +1.2 666,838 + Dshi_0661 0.87 +0.8 666,846 - Dshi_0661 0.87 +0.6 666,939 - +1.5 666,953 - +0.9 666,953 - +0.6 667,004 + +0.3 667,081 + +1.2 667,081 + +2.3 667,172 + Dshi_0662 0.15 +0.7 667,185 - Dshi_0662 0.17 +1.7 667,248 + +0.9 667,255 - Dshi_0662 0.26 +0.0 667,317 - Dshi_0662 0.35 +0.9 667,350 + Dshi_0662 0.39 +1.0 667,407 - Dshi_0662 0.47 +1.7 667,414 - Dshi_0662 0.48 +1.1 667,418 + Dshi_0662 0.49 +0.5 667,576 - Dshi_0662 0.70 +1.0 667,581 - Dshi_0662 0.71 +1.5 667,613 + Dshi_0662 0.75 +1.7 667,690 - Dshi_0662 0.86 -0.1 667,807 - +1.9 667,886 + Dshi_0663 0.35 +0.9 667,894 - Dshi_0663 0.39 -0.7 667,988 + Dshi_0663 0.79 +1.5 668,023 - +0.4 668,030 + -0.1 668,110 - +0.7 668,158 - Dshi_0664 0.14 +1.5 668,167 + Dshi_0664 0.16 -0.2 668,277 - Dshi_0664 0.28 +1.2 668,277 - Dshi_0664 0.28 +2.3 668,352 - Dshi_0664 0.37 +1.2 668,378 + Dshi_0664 0.40 -0.4 668,391 + Dshi_0664 0.41 +1.1 668,409 + Dshi_0664 0.44 -0.1 668,409 - Dshi_0664 0.44 +2.3 668,436 + Dshi_0664 0.47 +1.1 668,461 + Dshi_0664 0.50 +1.3 668,461 + Dshi_0664 0.50 -0.4 668,602 - Dshi_0664 0.66 +0.0 668,606 + Dshi_0664 0.66 +1.3 668,699 - Dshi_0664 0.77 +0.1
Or see this region's nucleotide sequence