Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0016 and Dshi_0017 are separated by 89 nucleotides Dshi_0017 and Dshi_0018 are separated by 159 nucleotides
Dshi_0016: Dshi_0016 - lytic murein transglycosylase (RefSeq), at 18,179 to 19,426
_0016
Dshi_0017: Dshi_0017 - hypothetical protein (RefSeq), at 19,516 to 20,166
_0017
Dshi_0018: Dshi_0018 - multicopper oxidase type 2 (RefSeq), at 20,326 to 22,629
_0018
Position (kb) 19
20
21 Strain fitness (log2 ratio) -1
0
1 at 18.532 kb on + strand, within Dshi_0016 at 18.611 kb on + strand, within Dshi_0016 at 18.768 kb on + strand, within Dshi_0016 at 18.769 kb on + strand, within Dshi_0016 at 18.770 kb on - strand, within Dshi_0016 at 18.791 kb on - strand, within Dshi_0016 at 18.883 kb on + strand, within Dshi_0016 at 18.931 kb on + strand, within Dshi_0016 at 18.939 kb on - strand, within Dshi_0016 at 18.939 kb on - strand, within Dshi_0016 at 18.939 kb on - strand, within Dshi_0016 at 18.975 kb on + strand, within Dshi_0016 at 19.150 kb on + strand, within Dshi_0016 at 19.152 kb on - strand at 19.181 kb on + strand, within Dshi_0016 at 19.218 kb on - strand, within Dshi_0016 at 19.223 kb on + strand, within Dshi_0016 at 19.257 kb on - strand, within Dshi_0016 at 19.361 kb on - strand at 19.368 kb on + strand at 19.376 kb on - strand at 19.389 kb on + strand at 19.477 kb on + strand at 19.498 kb on + strand at 19.506 kb on - strand at 19.599 kb on - strand, within Dshi_0017 at 19.680 kb on - strand, within Dshi_0017 at 19.924 kb on + strand, within Dshi_0017 at 20.047 kb on - strand, within Dshi_0017 at 20.071 kb on - strand, within Dshi_0017 at 20.112 kb on + strand at 20.120 kb on - strand at 20.172 kb on - strand at 20.270 kb on - strand at 20.373 kb on + strand at 20.415 kb on + strand at 20.525 kb on - strand at 20.543 kb on - strand at 20.569 kb on + strand, within Dshi_0018 at 20.585 kb on - strand, within Dshi_0018 at 20.632 kb on - strand, within Dshi_0018 at 20.764 kb on + strand, within Dshi_0018 at 20.772 kb on - strand, within Dshi_0018 at 20.793 kb on + strand at 20.800 kb on + strand, within Dshi_0018 at 20.925 kb on + strand, within Dshi_0018 at 20.930 kb on + strand, within Dshi_0018 at 20.940 kb on + strand, within Dshi_0018 at 20.998 kb on + strand, within Dshi_0018 at 21.033 kb on - strand, within Dshi_0018 at 21.092 kb on - strand, within Dshi_0018 at 21.122 kb on - strand, within Dshi_0018
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 18,532 + Dshi_0016 0.28 -0.5 18,611 + Dshi_0016 0.35 -0.1 18,768 + Dshi_0016 0.47 -0.4 18,769 + Dshi_0016 0.47 +0.3 18,770 - Dshi_0016 0.47 -0.4 18,791 - Dshi_0016 0.49 -0.6 18,883 + Dshi_0016 0.56 +0.6 18,931 + Dshi_0016 0.60 -0.6 18,939 - Dshi_0016 0.61 +0.1 18,939 - Dshi_0016 0.61 -0.4 18,939 - Dshi_0016 0.61 -1.1 18,975 + Dshi_0016 0.64 +0.4 19,150 + Dshi_0016 0.78 +0.3 19,152 - -0.1 19,181 + Dshi_0016 0.80 -0.4 19,218 - Dshi_0016 0.83 -0.1 19,223 + Dshi_0016 0.84 -0.2 19,257 - Dshi_0016 0.86 +0.3 19,361 - -1.4 19,368 + +1.4 19,376 - -0.3 19,389 + -1.6 19,477 + -0.1 19,498 + +0.6 19,506 - -0.1 19,599 - Dshi_0017 0.13 -0.5 19,680 - Dshi_0017 0.25 +0.6 19,924 + Dshi_0017 0.63 -0.5 20,047 - Dshi_0017 0.82 -1.6 20,071 - Dshi_0017 0.85 +0.2 20,112 + -0.8 20,120 - +0.3 20,172 - +0.1 20,270 - -0.1 20,373 + +0.1 20,415 + -1.2 20,525 - +0.1 20,543 - -0.0 20,569 + Dshi_0018 0.11 -0.6 20,585 - Dshi_0018 0.11 -0.1 20,632 - Dshi_0018 0.13 +0.1 20,764 + Dshi_0018 0.19 -0.9 20,772 - Dshi_0018 0.19 -0.5 20,793 + +0.9 20,800 + Dshi_0018 0.21 +0.3 20,925 + Dshi_0018 0.26 -0.5 20,930 + Dshi_0018 0.26 -0.3 20,940 + Dshi_0018 0.27 +0.9 20,998 + Dshi_0018 0.29 -1.5 21,033 - Dshi_0018 0.31 +0.3 21,092 - Dshi_0018 0.33 +0.1 21,122 - Dshi_0018 0.35 +1.7
Or see this region's nucleotide sequence