Strain Fitness in Pantoea sp. MT58 around IAI47_17375

Experiment: nitrogen source nitrate 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrate 5mM
3,677,787	+				-0.9
3,677,787	+				+0.0
3,677,787	+				-1.2
3,677,787	+				-0.7
3,677,788	-				+0.7
3,677,788	-				-1.3
3,677,788	-				+0.6
3,677,788	-				+0.3
3,677,788	-				+0.4
3,677,788	-				-1.8
3,677,790	+				+1.1
3,677,790	+				+0.3
3,677,790	+				+1.9
3,677,806	+				+0.6
3,677,807	-				+2.5
3,677,807	-				+0.2
3,677,836	+		IAI47_17370	0.10	-0.3
3,677,836	+		IAI47_17370	0.10	-0.3
3,677,836	+		IAI47_17370	0.10	-0.2
3,677,836	+		IAI47_17370	0.10	+0.9
3,677,836	+		IAI47_17370	0.10	-0.6
3,677,836	+		IAI47_17370	0.10	-1.9
3,677,837	-		IAI47_17370	0.10	+1.9
3,677,837	-		IAI47_17370	0.10	-0.6
3,677,837	-		IAI47_17370	0.10	+1.3
3,677,837	-		IAI47_17370	0.10	-2.0
3,677,837	-		IAI47_17370	0.10	+0.2
3,677,837	-		IAI47_17370	0.10	-0.9
3,677,837	-		IAI47_17370	0.10	-1.6
3,677,855	+		IAI47_17370	0.12	+0.2
3,677,855	+		IAI47_17370	0.12	+1.0
3,677,867	-		IAI47_17370	0.13	+0.8
3,677,867	-		IAI47_17370	0.13	-0.5
3,677,867	-		IAI47_17370	0.13	-2.4
3,677,961	+		IAI47_17370	0.22	-0.1
3,677,962	-		IAI47_17370	0.22	-2.9
3,677,962	-		IAI47_17370	0.22	+1.8
3,677,991	+		IAI47_17370	0.25	+0.3
3,677,991	+		IAI47_17370	0.25	-1.3
3,677,992	-		IAI47_17370	0.25	+1.3
3,678,034	+		IAI47_17370	0.29	+1.7
3,678,034	+		IAI47_17370	0.29	+1.1
3,678,034	+		IAI47_17370	0.29	-0.2
3,678,034	+		IAI47_17370	0.29	-0.9
3,678,035	-		IAI47_17370	0.29	-0.1
3,678,035	-		IAI47_17370	0.29	+0.9
3,678,035	-		IAI47_17370	0.29	+0.1
3,678,035	-		IAI47_17370	0.29	+1.5
3,678,035	-		IAI47_17370	0.29	-0.4
3,678,035	-		IAI47_17370	0.29	+0.4
3,678,035	-		IAI47_17370	0.29	+0.9
3,678,035	-		IAI47_17370	0.29	-1.0
3,678,100	+		IAI47_17370	0.35	-0.1
3,678,122	-		IAI47_17370	0.37	-0.4
3,678,298	+		IAI47_17370	0.53	+0.4
3,678,298	+		IAI47_17370	0.53	+1.1
3,678,298	+		IAI47_17370	0.53	-0.3
3,678,298	+		IAI47_17370	0.53	-1.7
3,678,299	-		IAI47_17370	0.53	-0.0
3,678,299	-		IAI47_17370	0.53	+0.4
3,678,299	-		IAI47_17370	0.53	-0.1
3,678,299	-		IAI47_17370	0.53	-0.7
3,678,396	+		IAI47_17370	0.62	-2.4
3,678,396	+		IAI47_17370	0.62	+1.1
3,678,396	+		IAI47_17370	0.62	+0.4
3,678,396	+		IAI47_17370	0.62	+0.7
3,678,397	-		IAI47_17370	0.62	-0.0
3,678,397	-		IAI47_17370	0.62	-0.5
3,678,397	-		IAI47_17370	0.62	+1.1
3,678,400	+		IAI47_17370	0.62	-0.7
3,678,401	-		IAI47_17370	0.62	-0.5
3,678,401	-		IAI47_17370	0.62	+0.9
3,678,415	-		IAI47_17370	0.64	-0.7
3,678,415	-		IAI47_17370	0.64	+0.9
3,678,446	-		IAI47_17370	0.67	-1.5
3,678,504	+		IAI47_17370	0.72	+0.8
3,678,504	+		IAI47_17370	0.72	-0.5
3,678,504	+		IAI47_17370	0.72	-2.1
3,678,504	+		IAI47_17370	0.72	+0.9
3,678,504	+		IAI47_17370	0.72	-0.6
3,678,504	+		IAI47_17370	0.72	+0.3
3,678,505	-		IAI47_17370	0.72	+0.3
3,678,505	-		IAI47_17370	0.72	+1.0
3,678,505	-		IAI47_17370	0.72	+1.1
3,678,505	-		IAI47_17370	0.72	+0.4
3,678,505	-		IAI47_17370	0.72	-1.5
3,678,505	-		IAI47_17370	0.72	+1.5
3,678,505	-				+2.3
3,678,505	-		IAI47_17370	0.72	-1.4
3,678,505	-		IAI47_17370	0.72	-0.3
3,678,505	-		IAI47_17370	0.72	-0.7
3,678,505	-		IAI47_17370	0.72	-1.6
3,678,505	-		IAI47_17370	0.72	+0.7
3,678,534	+		IAI47_17370	0.75	+0.2
3,678,534	+		IAI47_17370	0.75	+1.0
3,678,534	+		IAI47_17370	0.75	+0.2
3,678,534	+		IAI47_17370	0.75	+0.2
3,678,534	+		IAI47_17370	0.75	+0.3
3,678,534	+		IAI47_17370	0.75	-0.3
3,678,534	+		IAI47_17370	0.75	-1.5
3,678,534	+		IAI47_17370	0.75	+1.1
3,678,534	+		IAI47_17370	0.75	-1.5
3,678,534	+		IAI47_17370	0.75	-0.8
3,678,534	+		IAI47_17370	0.75	-1.2
3,678,534	+		IAI47_17370	0.75	+0.1
3,678,534	+		IAI47_17370	0.75	+1.0
3,678,534	+		IAI47_17370	0.75	-1.4
3,678,534	+		IAI47_17370	0.75	+0.0
3,678,534	+		IAI47_17370	0.75	+0.5
3,678,534	+		IAI47_17370	0.75	+0.4
3,678,534	+		IAI47_17370	0.75	+0.4
3,678,534	+		IAI47_17370	0.75	-1.7
3,678,534	+		IAI47_17370	0.75	+0.3
3,678,534	+		IAI47_17370	0.75	+0.5
3,678,534	+		IAI47_17370	0.75	+0.6
3,678,534	+		IAI47_17370	0.75	+0.2
3,678,534	+		IAI47_17370	0.75	+1.3
3,678,534	+		IAI47_17370	0.75	+0.2
3,678,534	+		IAI47_17370	0.75	+0.5
3,678,534	+		IAI47_17370	0.75	-0.5
3,678,534	+		IAI47_17370	0.75	+2.0
3,678,534	+		IAI47_17370	0.75	+0.6
3,678,534	+		IAI47_17370	0.75	+0.8
3,678,534	+		IAI47_17370	0.75	+0.4
3,678,534	+		IAI47_17370	0.75	+0.6
3,678,534	+		IAI47_17370	0.75	-1.2
3,678,534	+		IAI47_17370	0.75	+0.0
3,678,534	+		IAI47_17370	0.75	+0.5
3,678,534	+		IAI47_17370	0.75	-0.6
3,678,535	-		IAI47_17370	0.75	+0.3
3,678,535	-		IAI47_17370	0.75	-0.6
3,678,535	-		IAI47_17370	0.75	+1.2
3,678,535	-		IAI47_17370	0.75	+1.0
3,678,535	-		IAI47_17370	0.75	-0.9
3,678,535	-		IAI47_17370	0.75	+0.0
3,678,535	-		IAI47_17370	0.75	-1.1
3,678,535	-		IAI47_17370	0.75	-0.4
3,678,535	-		IAI47_17370	0.75	+0.1
3,678,535	-		IAI47_17370	0.75	-0.7
3,678,535	-		IAI47_17370	0.75	-0.2
3,678,535	-		IAI47_17370	0.75	-1.2
3,678,535	-		IAI47_17370	0.75	+0.8
3,678,535	-		IAI47_17370	0.75	-0.8
3,678,535	-		IAI47_17370	0.75	-0.3
3,678,535	-		IAI47_17370	0.75	-0.4
3,678,535	-		IAI47_17370	0.75	-0.2
3,678,535	-		IAI47_17370	0.75	+0.7
3,678,535	-		IAI47_17370	0.75	+0.3
3,678,535	-		IAI47_17370	0.75	-0.4
3,678,535	-		IAI47_17370	0.75	+0.3
3,678,535	-		IAI47_17370	0.75	+1.3
3,678,535	-		IAI47_17370	0.75	-1.0
3,678,535	-		IAI47_17370	0.75	+1.2
3,678,535	-		IAI47_17370	0.75	-2.0
3,678,535	-		IAI47_17370	0.75	+0.8
3,678,535	-		IAI47_17370	0.75	+0.8
3,678,535	-		IAI47_17370	0.75	-0.4
3,678,535	-		IAI47_17370	0.75	+0.6
3,678,535	-		IAI47_17370	0.75	-0.9
3,678,535	-		IAI47_17370	0.75	-1.1
3,678,535	-		IAI47_17370	0.75	+0.2
3,678,544	+		IAI47_17370	0.76	+0.9
3,678,544	+		IAI47_17370	0.76	-1.7
3,678,544	+		IAI47_17370	0.76	-1.1
3,678,592	-		IAI47_17370	0.80	-0.1
3,678,687	-		IAI47_17370	0.89	-1.5
3,678,703	+				-1.0
3,678,704	-				+1.3
3,678,704	-				-0.9
3,678,704	-				-2.1
3,678,725	+				+1.1
3,678,725	+				+0.4
3,678,726	-				+1.4
3,678,726	-				+0.4
3,678,739	+				-0.4
3,678,739	+				-1.0
3,678,739	+				+0.0
3,678,740	-				+0.9
3,678,840	+				-3.5
3,678,840	+				-1.2
3,678,841	-				-0.3
3,678,841	-				-1.1
3,678,841	-				-2.2
3,678,860	+				-2.6
3,678,860	+				+0.5
3,678,860	+				+0.6
3,678,860	+				+0.4
3,678,860	+				+0.7
3,678,861	-				+0.3
3,678,861	-				-0.4
3,678,861	-				+1.0
3,678,863	-				+0.3
3,678,865	-				-0.5
3,678,872	+				+0.5
3,678,872	+				-0.0
3,678,873	-				+1.1
3,678,873	-				-1.0
3,678,873	-				+0.1
3,678,907	+				+0.3
3,678,907	+				+0.7
3,678,908	-				+0.6
3,678,981	-		IAI47_17375	0.12	-0.9
3,678,981	-		IAI47_17375	0.12	+0.7
3,679,070	+		IAI47_17375	0.17	-1.4
3,679,070	+		IAI47_17375	0.17	-1.3
3,679,071	-		IAI47_17375	0.17	-0.9
3,679,090	+		IAI47_17375	0.18	+0.5
3,679,091	-		IAI47_17375	0.18	+1.1
3,679,206	+		IAI47_17375	0.25	+0.9
3,679,207	-		IAI47_17375	0.25	-0.1
3,679,207	-		IAI47_17375	0.25	+0.5
3,679,210	+		IAI47_17375	0.25	-2.2
3,679,211	-		IAI47_17375	0.25	-0.7
3,679,211	-		IAI47_17375	0.25	+2.1
3,679,212	-		IAI47_17375	0.25	-0.6
3,679,245	+		IAI47_17375	0.27	-0.9
3,679,335	+		IAI47_17375	0.32	+0.4
3,679,335	+		IAI47_17375	0.32	+0.4
3,679,335	+		IAI47_17375	0.32	-1.5
3,679,336	-		IAI47_17375	0.32	+1.0
3,679,336	-		IAI47_17375	0.32	-1.9
3,679,336	-		IAI47_17375	0.32	+1.0
3,679,336	-		IAI47_17375	0.32	-0.3
3,679,366	-		IAI47_17375	0.34	-0.1
3,679,366	-		IAI47_17375	0.34	+0.6
3,679,377	+				+2.3
3,679,377	+		IAI47_17375	0.34	-0.2
3,679,378	-		IAI47_17375	0.35	+0.7
3,679,378	-		IAI47_17375	0.35	-0.9
3,679,415	+		IAI47_17375	0.37	+0.0
3,679,415	+		IAI47_17375	0.37	-0.3
3,679,415	+		IAI47_17375	0.37	-0.2
3,679,415	+		IAI47_17375	0.37	+0.2
3,679,415	+		IAI47_17375	0.37	+1.0
3,679,415	+		IAI47_17375	0.37	+0.8
3,679,415	+		IAI47_17375	0.37	-1.3
3,679,415	+		IAI47_17375	0.37	+0.2
3,679,416	-		IAI47_17375	0.37	+0.2
3,679,416	-		IAI47_17375	0.37	+1.8
3,679,416	-		IAI47_17375	0.37	+0.1
3,679,416	-		IAI47_17375	0.37	+0.2
3,679,416	-		IAI47_17375	0.37	-0.2
3,679,416	-		IAI47_17375	0.37	+0.5
3,679,416	-		IAI47_17375	0.37	-0.7
3,679,416	-		IAI47_17375	0.37	-1.6
3,679,416	-		IAI47_17375	0.37	-0.0
3,679,416	-		IAI47_17375	0.37	-1.2
3,679,416	-		IAI47_17375	0.37	-0.5
3,679,416	-		IAI47_17375	0.37	-1.5
3,679,418	+		IAI47_17375	0.37	-2.1
3,679,418	+		IAI47_17375	0.37	-1.6
3,679,418	+		IAI47_17375	0.37	+0.6
3,679,418	+		IAI47_17375	0.37	-2.2
3,679,419	-		IAI47_17375	0.37	-1.0
3,679,421	+		IAI47_17375	0.37	+1.1
3,679,421	+		IAI47_17375	0.37	-1.4
3,679,421	+		IAI47_17375	0.37	+0.7
3,679,422	-		IAI47_17375	0.37	-1.9
3,679,422	-		IAI47_17375	0.37	+1.8
3,679,481	+		IAI47_17375	0.40	+0.2
3,679,481	+		IAI47_17375	0.40	+1.6
3,679,481	+		IAI47_17375	0.40	+0.3
3,679,481	+		IAI47_17375	0.40	-0.3
3,679,481	+		IAI47_17375	0.40	+1.3
3,679,481	+		IAI47_17375	0.40	+0.8
3,679,481	+		IAI47_17375	0.40	-0.6
3,679,481	+		IAI47_17375	0.40	-0.1
3,679,481	+		IAI47_17375	0.40	-0.8
3,679,481	+		IAI47_17375	0.40	+0.4
3,679,481	+		IAI47_17375	0.40	+1.5
3,679,481	+		IAI47_17375	0.40	-1.9
3,679,481	+		IAI47_17375	0.40	-0.2
3,679,481	+		IAI47_17375	0.40	+0.7
3,679,481	+		IAI47_17375	0.40	+0.5
3,679,481	+		IAI47_17375	0.40	-0.7
3,679,481	+		IAI47_17375	0.40	+0.7
3,679,481	+		IAI47_17375	0.40	-1.5
3,679,482	-		IAI47_17375	0.40	+1.1
3,679,482	-		IAI47_17375	0.40	+0.0
3,679,482	-		IAI47_17375	0.40	+0.4
3,679,482	-		IAI47_17375	0.40	-0.1
3,679,482	-		IAI47_17375	0.40	-1.1
3,679,482	-		IAI47_17375	0.40	+0.6
3,679,482	-		IAI47_17375	0.40	+1.5
3,679,482	-		IAI47_17375	0.40	+0.1
3,679,482	-		IAI47_17375	0.40	+0.6
3,679,482	-		IAI47_17375	0.40	-1.0
3,679,482	-		IAI47_17375	0.40	-1.5
3,679,482	-		IAI47_17375	0.40	-0.2
3,679,482	-		IAI47_17375	0.40	-0.1
3,679,482	-		IAI47_17375	0.40	+1.3
3,679,482	-		IAI47_17375	0.40	-0.2
3,679,482	-		IAI47_17375	0.40	-1.2
3,679,482	-		IAI47_17375	0.40	+2.0
3,679,482	-		IAI47_17375	0.40	-0.2
3,679,482	-		IAI47_17375	0.40	-0.3
3,679,482	-		IAI47_17375	0.40	+2.3
3,679,482	-		IAI47_17375	0.40	-0.4
3,679,482	-		IAI47_17375	0.40	+1.8
3,679,485	+		IAI47_17375	0.41	-0.5
3,679,485	+		IAI47_17375	0.41	+0.4
3,679,485	+		IAI47_17375	0.41	-0.7
3,679,485	+		IAI47_17375	0.41	-0.2
3,679,485	+		IAI47_17375	0.41	+0.1
3,679,485	+		IAI47_17375	0.41	-0.1
3,679,485	+		IAI47_17375	0.41	-1.1
3,679,485	+		IAI47_17375	0.41	+0.9
3,679,485	+		IAI47_17375	0.41	-0.1
3,679,485	+		IAI47_17375	0.41	+0.9
3,679,485	+		IAI47_17375	0.41	+0.5
3,679,486	-		IAI47_17375	0.41	+0.4
3,679,486	-		IAI47_17375	0.41	+0.4
3,679,486	-		IAI47_17375	0.41	-0.2
3,679,486	-		IAI47_17375	0.41	-0.6
3,679,520	+		IAI47_17375	0.43	-1.2
3,679,520	+		IAI47_17375	0.43	-0.7
3,679,520	+		IAI47_17375	0.43	-0.2
3,679,520	+		IAI47_17375	0.43	-1.2
3,679,520	+		IAI47_17375	0.43	-0.6
3,679,520	+		IAI47_17375	0.43	-0.0
3,679,520	+		IAI47_17375	0.43	+0.6
3,679,520	+		IAI47_17375	0.43	-0.7
3,679,520	+		IAI47_17375	0.43	+0.8
3,679,520	+		IAI47_17375	0.43	-1.2
3,679,520	+		IAI47_17375	0.43	-0.2
3,679,520	+		IAI47_17375	0.43	+0.7
3,679,520	+		IAI47_17375	0.43	+0.6
3,679,520	+		IAI47_17375	0.43	-0.5
3,679,521	-		IAI47_17375	0.43	-0.2
3,679,521	-		IAI47_17375	0.43	+0.3
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