Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3595

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,717,520	+		Ga0059261_3594	0.54	+0.3
3,717,520	+		Ga0059261_3594	0.54	+1.0
3,717,521	-		Ga0059261_3594	0.54	-1.0
3,717,521	-		Ga0059261_3594	0.54	-0.8
3,717,548	-		Ga0059261_3594	0.56	-2.0
3,717,653	-		Ga0059261_3594	0.61	-0.6
3,717,811	+		Ga0059261_3594	0.70	-0.9
3,717,812	-				-1.5
3,717,870	-		Ga0059261_3594	0.73	-0.1
3,718,057	+		Ga0059261_3594	0.84	-0.5
3,718,057	+		Ga0059261_3594	0.84	-0.1
3,718,057	+		Ga0059261_3594	0.84	+0.1
3,718,057	+		Ga0059261_3594	0.84	-0.5
3,718,057	+		Ga0059261_3594	0.84	+0.7
3,718,057	+		Ga0059261_3594	0.84	+0.2
3,718,058	-		Ga0059261_3594	0.84	-0.5
3,718,224	+				+0.0
3,718,225	-				+0.5
3,718,225	-				+0.1
3,718,225	-				-1.2
3,718,250	+				+0.0
3,718,250	+				-0.1
3,718,251	-				-0.4
3,718,251	-				+0.8
3,718,267	+				-0.9
3,718,268	-				-0.1
3,718,268	-				-0.3
3,718,268	-				-0.5
3,718,310	-				-1.0
3,718,310	-				-0.3
3,718,310	-				+0.6
3,718,446	+		Ga0059261_3595	0.11	-1.2
3,718,791	+		Ga0059261_3595	0.48	-0.5
3,718,792	-		Ga0059261_3595	0.48	-0.1
3,718,860	+		Ga0059261_3595	0.55	-1.2
3,718,861	-		Ga0059261_3595	0.55	-2.1
3,718,861	-		Ga0059261_3595	0.55	+0.1
3,719,005	+		Ga0059261_3595	0.71	-2.2
3,719,006	-				+0.8
3,719,006	-		Ga0059261_3595	0.71	-0.6
3,719,178	+		Ga0059261_3595	0.89	-1.1
3,719,178	+		Ga0059261_3595	0.89	-0.8
3,719,178	+		Ga0059261_3595	0.89	-2.2
3,719,178	+		Ga0059261_3595	0.89	-1.4
3,719,178	+		Ga0059261_3595	0.89	-1.7
3,719,178	+		Ga0059261_3595	0.89	-1.0
3,719,179	-		Ga0059261_3595	0.89	-1.7
3,719,179	-		Ga0059261_3595	0.89	-1.8
3,719,179	-				-0.8
3,719,206	+				+1.2
3,719,206	+				-0.9
3,719,207	-				-0.4