Experiment: methylglyoxal 0.001 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0955 and Ga0059261_0956 are separated by 8 nucleotides Ga0059261_0956 and Ga0059261_0957 are separated by 83 nucleotides Ga0059261_0957 and Ga0059261_0958 are separated by 157 nucleotides Ga0059261_0958 and Ga0059261_0959 are separated by 70 nucleotides Ga0059261_0959 and Ga0059261_0960 are separated by 100 nucleotides
Ga0059261_0955: Ga0059261_0955 - PilZ domain, at 986,112 to 986,447
_0955
Ga0059261_0956: Ga0059261_0956 - Uncharacterized protein conserved in bacteria, at 986,456 to 986,869
_0956
Ga0059261_0957: Ga0059261_0957 - Protein of unknown function (DUF2798), at 986,953 to 987,210
_0957
Ga0059261_0958: Ga0059261_0958 - ATP-dependent DNA helicase RecG (EC 3.6.1.-), at 987,368 to 989,425
_0958
Ga0059261_0959: Ga0059261_0959 - Uncharacterized conserved protein, at 989,496 to 989,762
_0959
Ga0059261_0960: Ga0059261_0960 - transcription-repair coupling factor (mfd), at 989,863 to 993,336
_0960
Position (kb) 987
988
989
990 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 986.412 kb on + strand, within Ga0059261_0955 at 986.412 kb on + strand, within Ga0059261_0955 at 986.412 kb on + strand, within Ga0059261_0955 at 986.412 kb on + strand, within Ga0059261_0955 at 986.412 kb on + strand, within Ga0059261_0955 at 986.412 kb on + strand, within Ga0059261_0955 at 986.413 kb on - strand, within Ga0059261_0955 at 986.413 kb on - strand, within Ga0059261_0955 at 986.413 kb on - strand, within Ga0059261_0955 at 986.413 kb on - strand, within Ga0059261_0955 at 986.413 kb on - strand, within Ga0059261_0955 at 986.415 kb on + strand at 986.415 kb on + strand at 986.415 kb on + strand at 986.416 kb on - strand at 986.416 kb on - strand at 986.416 kb on - strand at 986.450 kb on + strand at 986.450 kb on + strand at 986.450 kb on + strand at 986.450 kb on + strand at 986.451 kb on - strand at 986.451 kb on - strand at 986.451 kb on - strand at 986.451 kb on - strand at 986.457 kb on + strand at 986.457 kb on + strand at 986.457 kb on + strand at 986.457 kb on + strand at 986.458 kb on - strand at 986.458 kb on - strand at 986.637 kb on + strand, within Ga0059261_0956 at 986.638 kb on - strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.667 kb on + strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.668 kb on - strand, within Ga0059261_0956 at 986.907 kb on + strand at 986.908 kb on - strand at 986.908 kb on - strand at 986.908 kb on - strand at 986.908 kb on - strand at 986.908 kb on - strand at 986.908 kb on - strand at 986.908 kb on - strand at 986.996 kb on - strand, within Ga0059261_0957 at 987.158 kb on - strand, within Ga0059261_0957 at 987.158 kb on - strand, within Ga0059261_0957 at 987.213 kb on + strand at 987.213 kb on + strand at 987.213 kb on + strand at 987.213 kb on + strand at 987.213 kb on + strand at 987.214 kb on - strand at 987.214 kb on - strand at 987.214 kb on - strand at 987.214 kb on - strand at 987.415 kb on - strand at 987.415 kb on - strand at 987.415 kb on - strand at 987.640 kb on + strand, within Ga0059261_0958 at 987.641 kb on - strand, within Ga0059261_0958 at 987.641 kb on - strand, within Ga0059261_0958 at 987.698 kb on + strand, within Ga0059261_0958 at 987.699 kb on - strand, within Ga0059261_0958 at 988.014 kb on + strand, within Ga0059261_0958 at 988.014 kb on + strand, within Ga0059261_0958 at 988.014 kb on + strand, within Ga0059261_0958 at 988.015 kb on - strand, within Ga0059261_0958 at 988.015 kb on - strand, within Ga0059261_0958 at 988.015 kb on - strand, within Ga0059261_0958 at 988.015 kb on - strand, within Ga0059261_0958 at 988.289 kb on + strand, within Ga0059261_0958 at 988.289 kb on + strand, within Ga0059261_0958 at 988.289 kb on + strand, within Ga0059261_0958 at 988.289 kb on + strand, within Ga0059261_0958 at 988.289 kb on + strand, within Ga0059261_0958 at 988.290 kb on - strand, within Ga0059261_0958 at 988.290 kb on - strand, within Ga0059261_0958 at 988.290 kb on - strand, within Ga0059261_0958 at 988.300 kb on - strand, within Ga0059261_0958 at 988.343 kb on - strand, within Ga0059261_0958 at 988.613 kb on - strand, within Ga0059261_0958 at 988.662 kb on + strand, within Ga0059261_0958 at 988.663 kb on - strand, within Ga0059261_0958 at 988.663 kb on - strand, within Ga0059261_0958 at 988.780 kb on - strand, within Ga0059261_0958 at 988.971 kb on + strand, within Ga0059261_0958 at 988.972 kb on - strand, within Ga0059261_0958 at 988.972 kb on - strand, within Ga0059261_0958 at 988.972 kb on - strand, within Ga0059261_0958 at 988.972 kb on - strand, within Ga0059261_0958 at 989.049 kb on + strand, within Ga0059261_0958 at 989.050 kb on - strand, within Ga0059261_0958 at 989.050 kb on - strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.145 kb on + strand, within Ga0059261_0958 at 989.146 kb on - strand at 989.146 kb on - strand, within Ga0059261_0958 at 989.146 kb on - strand, within Ga0059261_0958 at 989.146 kb on - strand, within Ga0059261_0958 at 989.146 kb on - strand, within Ga0059261_0958 at 989.146 kb on - strand, within Ga0059261_0958 at 989.146 kb on - strand, within Ga0059261_0958 at 989.146 kb on - strand, within Ga0059261_0958 at 989.209 kb on - strand, within Ga0059261_0958 at 989.209 kb on - strand, within Ga0059261_0958 at 989.209 kb on - strand, within Ga0059261_0958 at 989.413 kb on + strand at 989.413 kb on + strand at 989.414 kb on - strand at 989.414 kb on - strand at 989.429 kb on + strand at 989.429 kb on + strand at 989.430 kb on - strand at 989.430 kb on - strand at 989.430 kb on - strand at 989.443 kb on + strand at 989.443 kb on + strand at 989.443 kb on + strand at 989.443 kb on + strand at 989.444 kb on - strand at 989.444 kb on - strand at 989.444 kb on - strand at 989.704 kb on - strand, within Ga0059261_0959 at 989.742 kb on + strand at 989.742 kb on + strand at 989.742 kb on + strand at 989.743 kb on - strand at 989.743 kb on - strand at 989.743 kb on - strand at 989.983 kb on + strand at 989.983 kb on + strand at 989.983 kb on + strand at 989.983 kb on + strand at 989.983 kb on + strand at 989.984 kb on - strand at 989.984 kb on - strand at 989.984 kb on - strand at 989.984 kb on - strand at 989.985 kb on + strand at 989.986 kb on - strand at 990.088 kb on + strand at 990.088 kb on + strand at 990.088 kb on + strand at 990.089 kb on - strand at 990.089 kb on - strand at 990.089 kb on - strand at 990.310 kb on + strand, within Ga0059261_0960 at 990.310 kb on + strand, within Ga0059261_0960 at 990.310 kb on + strand, within Ga0059261_0960 at 990.311 kb on - strand, within Ga0059261_0960 at 990.311 kb on - strand, within Ga0059261_0960 at 990.311 kb on - strand, within Ga0059261_0960
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.001 vol% remove 986,412 + Ga0059261_0955 0.89 +0.3 986,412 + Ga0059261_0955 0.89 -0.6 986,412 + Ga0059261_0955 0.89 -0.0 986,412 + Ga0059261_0955 0.89 -0.4 986,412 + Ga0059261_0955 0.89 -0.0 986,412 + Ga0059261_0955 0.89 -0.3 986,413 - Ga0059261_0955 0.90 +0.2 986,413 - Ga0059261_0955 0.90 +0.9 986,413 - Ga0059261_0955 0.90 +0.9 986,413 - Ga0059261_0955 0.90 -0.0 986,413 - Ga0059261_0955 0.90 +0.6 986,415 + -0.2 986,415 + -0.3 986,415 + +0.0 986,416 - +0.9 986,416 - +1.0 986,416 - -0.5 986,450 + -0.7 986,450 + -0.6 986,450 + -0.3 986,450 + -0.5 986,451 - +0.2 986,451 - +0.0 986,451 - +0.2 986,451 - +1.2 986,457 + +0.0 986,457 + -0.6 986,457 + -0.8 986,457 + -0.5 986,458 - -1.2 986,458 - -0.2 986,637 + Ga0059261_0956 0.44 +0.0 986,638 - Ga0059261_0956 0.44 -0.7 986,667 + Ga0059261_0956 0.51 +0.0 986,667 + Ga0059261_0956 0.51 +0.2 986,667 + Ga0059261_0956 0.51 +0.0 986,667 + Ga0059261_0956 0.51 +0.4 986,667 + Ga0059261_0956 0.51 -0.1 986,667 + Ga0059261_0956 0.51 -0.1 986,667 + Ga0059261_0956 0.51 +0.4 986,667 + Ga0059261_0956 0.51 +0.6 986,667 + Ga0059261_0956 0.51 -0.2 986,667 + Ga0059261_0956 0.51 +0.3 986,667 + Ga0059261_0956 0.51 +0.2 986,667 + Ga0059261_0956 0.51 +0.7 986,668 - Ga0059261_0956 0.51 -0.5 986,668 - Ga0059261_0956 0.51 +1.3 986,668 - +0.7 986,668 - Ga0059261_0956 0.51 +0.4 986,668 - Ga0059261_0956 0.51 -1.2 986,668 - Ga0059261_0956 0.51 +0.0 986,668 - Ga0059261_0956 0.51 -0.8 986,668 - Ga0059261_0956 0.51 -0.3 986,668 - Ga0059261_0956 0.51 +2.6 986,668 - Ga0059261_0956 0.51 +0.1 986,668 - Ga0059261_0956 0.51 +0.3 986,668 - Ga0059261_0956 0.51 +0.3 986,668 - Ga0059261_0956 0.51 -0.2 986,668 - Ga0059261_0956 0.51 -0.0 986,668 - Ga0059261_0956 0.51 +0.7 986,907 + +0.2 986,908 - -0.4 986,908 - +0.2 986,908 - -0.5 986,908 - +0.2 986,908 - +0.2 986,908 - +0.0 986,908 - +0.4 986,996 - Ga0059261_0957 0.17 +0.3 987,158 - Ga0059261_0957 0.79 +0.1 987,158 - Ga0059261_0957 0.79 -1.3 987,213 + +0.2 987,213 + -0.1 987,213 + -0.3 987,213 + +1.1 987,213 + -0.3 987,214 - -2.1 987,214 - +1.4 987,214 - +0.3 987,214 - +0.3 987,415 - -1.6 987,415 - -3.8 987,415 - -2.1 987,640 + Ga0059261_0958 0.13 -0.5 987,641 - Ga0059261_0958 0.13 -1.1 987,641 - Ga0059261_0958 0.13 -2.3 987,698 + Ga0059261_0958 0.16 -0.9 987,699 - Ga0059261_0958 0.16 -1.1 988,014 + Ga0059261_0958 0.31 -1.0 988,014 + Ga0059261_0958 0.31 -1.1 988,014 + Ga0059261_0958 0.31 -1.2 988,015 - Ga0059261_0958 0.31 -1.1 988,015 - Ga0059261_0958 0.31 -0.8 988,015 - Ga0059261_0958 0.31 -1.8 988,015 - Ga0059261_0958 0.31 -0.7 988,289 + Ga0059261_0958 0.45 -3.3 988,289 + Ga0059261_0958 0.45 -0.7 988,289 + Ga0059261_0958 0.45 -0.1 988,289 + Ga0059261_0958 0.45 -1.0 988,289 + Ga0059261_0958 0.45 -1.3 988,290 - Ga0059261_0958 0.45 -1.1 988,290 - Ga0059261_0958 0.45 -1.3 988,290 - Ga0059261_0958 0.45 -1.6 988,300 - Ga0059261_0958 0.45 -0.6 988,343 - Ga0059261_0958 0.47 -1.9 988,613 - Ga0059261_0958 0.60 -1.6 988,662 + Ga0059261_0958 0.63 -1.4 988,663 - Ga0059261_0958 0.63 -2.3 988,663 - Ga0059261_0958 0.63 -0.3 988,780 - Ga0059261_0958 0.69 -2.7 988,971 + Ga0059261_0958 0.78 -1.3 988,972 - Ga0059261_0958 0.78 -1.4 988,972 - Ga0059261_0958 0.78 -2.4 988,972 - Ga0059261_0958 0.78 -0.4 988,972 - Ga0059261_0958 0.78 -1.6 989,049 + Ga0059261_0958 0.82 +0.2 989,050 - Ga0059261_0958 0.82 -0.6 989,050 - Ga0059261_0958 0.82 -1.4 989,145 + Ga0059261_0958 0.86 -1.3 989,145 + Ga0059261_0958 0.86 -1.4 989,145 + Ga0059261_0958 0.86 -2.4 989,145 + Ga0059261_0958 0.86 -1.3 989,145 + Ga0059261_0958 0.86 -1.3 989,145 + Ga0059261_0958 0.86 -1.4 989,145 + Ga0059261_0958 0.86 +0.3 989,145 + Ga0059261_0958 0.86 +0.3 989,145 + Ga0059261_0958 0.86 -0.1 989,145 + Ga0059261_0958 0.86 -0.6 989,145 + Ga0059261_0958 0.86 -0.4 989,145 + Ga0059261_0958 0.86 -1.1 989,145 + Ga0059261_0958 0.86 -0.8 989,145 + Ga0059261_0958 0.86 -2.3 989,145 + Ga0059261_0958 0.86 -0.9 989,145 + Ga0059261_0958 0.86 -0.3 989,146 - -0.8 989,146 - Ga0059261_0958 0.86 -1.1 989,146 - Ga0059261_0958 0.86 -1.9 989,146 - Ga0059261_0958 0.86 -1.3 989,146 - Ga0059261_0958 0.86 -2.3 989,146 - Ga0059261_0958 0.86 -1.3 989,146 - Ga0059261_0958 0.86 -1.5 989,146 - Ga0059261_0958 0.86 -0.6 989,209 - Ga0059261_0958 0.89 -1.7 989,209 - Ga0059261_0958 0.89 -1.5 989,209 - Ga0059261_0958 0.89 -0.3 989,413 + -0.6 989,413 + -0.3 989,414 - -0.1 989,414 - -1.4 989,429 + -0.3 989,429 + -0.1 989,430 - -0.6 989,430 - +0.2 989,430 - +0.7 989,443 + -0.6 989,443 + -0.0 989,443 + -0.6 989,443 + -1.0 989,444 - -2.3 989,444 - -2.6 989,444 - -1.7 989,704 - Ga0059261_0959 0.78 +0.4 989,742 + -0.3 989,742 + +0.2 989,742 + +0.3 989,743 - -0.6 989,743 - -1.0 989,743 - -0.1 989,983 + -1.0 989,983 + +0.2 989,983 + -0.3 989,983 + +0.2 989,983 + +0.0 989,984 - -1.1 989,984 - -0.5 989,984 - -0.3 989,984 - +0.4 989,985 + -1.5 989,986 - +0.7 990,088 + -0.3 990,088 + -1.1 990,088 + +0.4 990,089 - +1.3 990,089 - -0.8 990,089 - -0.7 990,310 + Ga0059261_0960 0.13 +0.1 990,310 + Ga0059261_0960 0.13 -0.6 990,310 + Ga0059261_0960 0.13 +0.1 990,311 - Ga0059261_0960 0.13 +0.7 990,311 - Ga0059261_0960 0.13 +0.2 990,311 - Ga0059261_0960 0.13 -0.2
Or see this region's nucleotide sequence