Experiment: methylglyoxal 0.001 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0818 and Ga0059261_0819 are separated by 78 nucleotides Ga0059261_0819 and Ga0059261_0820 are separated by 403 nucleotides
Ga0059261_0818: Ga0059261_0818 - OmpA family, at 860,222 to 861,109
_0818
Ga0059261_0819: Ga0059261_0819 - Holliday junction DNA helicase subunit RuvB, at 861,188 to 862,216
_0819
Ga0059261_0820: Ga0059261_0820 - Holliday junction DNA helicase subunit RuvA, at 862,620 to 863,219
_0820
Position (kb) 861
862
863 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 860.336 kb on + strand, within Ga0059261_0818 at 860.336 kb on + strand, within Ga0059261_0818 at 860.337 kb on - strand, within Ga0059261_0818 at 860.389 kb on + strand, within Ga0059261_0818 at 860.389 kb on + strand, within Ga0059261_0818 at 860.389 kb on + strand, within Ga0059261_0818 at 860.389 kb on + strand, within Ga0059261_0818 at 860.390 kb on - strand, within Ga0059261_0818 at 860.390 kb on - strand, within Ga0059261_0818 at 860.390 kb on - strand, within Ga0059261_0818 at 860.474 kb on + strand, within Ga0059261_0818 at 860.723 kb on + strand at 860.723 kb on + strand, within Ga0059261_0818 at 860.723 kb on + strand, within Ga0059261_0818 at 860.723 kb on + strand, within Ga0059261_0818 at 860.723 kb on + strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.724 kb on - strand, within Ga0059261_0818 at 860.725 kb on + strand, within Ga0059261_0818 at 860.725 kb on + strand, within Ga0059261_0818 at 860.725 kb on + strand, within Ga0059261_0818 at 860.725 kb on + strand, within Ga0059261_0818 at 860.725 kb on + strand, within Ga0059261_0818 at 860.726 kb on - strand, within Ga0059261_0818 at 860.726 kb on - strand, within Ga0059261_0818 at 860.859 kb on - strand, within Ga0059261_0818 at 860.859 kb on - strand, within Ga0059261_0818 at 860.861 kb on - strand, within Ga0059261_0818 at 860.861 kb on - strand, within Ga0059261_0818 at 860.930 kb on + strand, within Ga0059261_0818 at 860.930 kb on + strand, within Ga0059261_0818 at 860.931 kb on - strand, within Ga0059261_0818 at 860.931 kb on - strand, within Ga0059261_0818 at 861.174 kb on + strand at 861.189 kb on + strand at 862.218 kb on + strand at 862.305 kb on - strand at 862.305 kb on - strand at 862.316 kb on + strand at 862.316 kb on + strand at 862.317 kb on - strand at 862.317 kb on - strand at 862.317 kb on - strand at 862.317 kb on - strand at 862.365 kb on + strand at 862.366 kb on - strand at 862.366 kb on - strand at 862.440 kb on + strand at 862.448 kb on + strand at 862.449 kb on - strand at 862.449 kb on - strand at 862.449 kb on - strand at 862.449 kb on - strand at 862.483 kb on - strand at 862.483 kb on - strand at 862.498 kb on - strand at 862.498 kb on - strand at 862.498 kb on - strand at 862.926 kb on + strand, within Ga0059261_0820
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.001 vol% remove 860,336 + Ga0059261_0818 0.13 +1.7 860,336 + Ga0059261_0818 0.13 -0.2 860,337 - Ga0059261_0818 0.13 -1.0 860,389 + Ga0059261_0818 0.19 -0.1 860,389 + Ga0059261_0818 0.19 -1.1 860,389 + Ga0059261_0818 0.19 -0.1 860,389 + Ga0059261_0818 0.19 -0.9 860,390 - Ga0059261_0818 0.19 +0.2 860,390 - Ga0059261_0818 0.19 -0.3 860,390 - Ga0059261_0818 0.19 +0.7 860,474 + Ga0059261_0818 0.28 +0.4 860,723 + -0.3 860,723 + Ga0059261_0818 0.56 -0.8 860,723 + Ga0059261_0818 0.56 -0.9 860,723 + Ga0059261_0818 0.56 -0.4 860,723 + Ga0059261_0818 0.56 +0.2 860,724 - Ga0059261_0818 0.57 -0.1 860,724 - Ga0059261_0818 0.57 +0.5 860,724 - Ga0059261_0818 0.57 -0.1 860,724 - Ga0059261_0818 0.57 +0.2 860,724 - Ga0059261_0818 0.57 -0.6 860,724 - Ga0059261_0818 0.57 +0.5 860,724 - Ga0059261_0818 0.57 -0.8 860,724 - Ga0059261_0818 0.57 -0.1 860,724 - Ga0059261_0818 0.57 -0.4 860,724 - Ga0059261_0818 0.57 +0.6 860,724 - Ga0059261_0818 0.57 +2.2 860,724 - Ga0059261_0818 0.57 +0.4 860,725 + Ga0059261_0818 0.57 -0.6 860,725 + Ga0059261_0818 0.57 -0.4 860,725 + Ga0059261_0818 0.57 -0.3 860,725 + Ga0059261_0818 0.57 -0.7 860,725 + Ga0059261_0818 0.57 +0.3 860,726 - Ga0059261_0818 0.57 +0.3 860,726 - Ga0059261_0818 0.57 -0.4 860,859 - Ga0059261_0818 0.72 -0.7 860,859 - Ga0059261_0818 0.72 +0.1 860,861 - Ga0059261_0818 0.72 +0.7 860,861 - Ga0059261_0818 0.72 -1.4 860,930 + Ga0059261_0818 0.80 -1.8 860,930 + Ga0059261_0818 0.80 -0.1 860,931 - Ga0059261_0818 0.80 +0.5 860,931 - Ga0059261_0818 0.80 -0.7 861,174 + -0.5 861,189 + -0.3 862,218 + -4.0 862,305 - -0.3 862,305 - -1.0 862,316 + -0.5 862,316 + -0.3 862,317 - -0.3 862,317 - +0.3 862,317 - +0.1 862,317 - +0.6 862,365 + -0.3 862,366 - -0.1 862,366 - -0.7 862,440 + -0.8 862,448 + -0.3 862,449 - +0.4 862,449 - +0.2 862,449 - +0.9 862,449 - -0.4 862,483 - -0.4 862,483 - +0.7 862,498 - +0.2 862,498 - +0.5 862,498 - -0.3 862,926 + Ga0059261_0820 0.51 +0.3
Or see this region's nucleotide sequence