Experiment: methylglyoxal 0.001 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0620 and Ga0059261_0621 are separated by 57 nucleotides Ga0059261_0621 and Ga0059261_0622 overlap by 4 nucleotides Ga0059261_0622 and Ga0059261_0623 are separated by 50 nucleotides
Ga0059261_0620: Ga0059261_0620 - Outer membrane cobalamin receptor protein, at 659,926 to 661,821
_0620
Ga0059261_0621: Ga0059261_0621 - cob(I)yrinic acid a,c-diamide adenosyltransferase (EC 2.5.1.17), at 661,879 to 662,487
_0621
Ga0059261_0622: Ga0059261_0622 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 662,484 to 663,323
_0622
Ga0059261_0623: Ga0059261_0623 - ABC-type Fe3+-siderophore transport system, permease component, at 663,374 to 664,369
_0623
Position (kb) 662
663
664 Strain fitness (log2 ratio) -2
-1
0
1 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.486 kb on + strand, within Ga0059261_0620 at 661.487 kb on - strand, within Ga0059261_0620 at 661.487 kb on - strand, within Ga0059261_0620 at 661.487 kb on - strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.526 kb on + strand, within Ga0059261_0620 at 661.527 kb on - strand, within Ga0059261_0620 at 661.527 kb on - strand, within Ga0059261_0620 at 661.532 kb on + strand, within Ga0059261_0620 at 661.532 kb on + strand, within Ga0059261_0620 at 661.532 kb on + strand, within Ga0059261_0620 at 661.532 kb on + strand, within Ga0059261_0620 at 661.533 kb on - strand, within Ga0059261_0620 at 661.666 kb on + strand at 661.666 kb on + strand at 661.667 kb on - strand at 661.667 kb on - strand at 661.667 kb on - strand at 661.667 kb on - strand at 661.701 kb on + strand at 661.710 kb on + strand at 661.710 kb on + strand at 661.710 kb on + strand at 661.711 kb on - strand at 661.720 kb on + strand at 661.720 kb on + strand at 661.720 kb on + strand at 661.720 kb on + strand at 661.721 kb on - strand at 661.754 kb on - strand at 661.755 kb on + strand at 661.795 kb on + strand at 661.795 kb on + strand at 662.255 kb on - strand, within Ga0059261_0621 at 662.255 kb on - strand, within Ga0059261_0621 at 662.255 kb on - strand, within Ga0059261_0621 at 662.296 kb on + strand, within Ga0059261_0621 at 662.296 kb on + strand, within Ga0059261_0621 at 662.297 kb on - strand, within Ga0059261_0621 at 662.302 kb on + strand at 662.302 kb on + strand, within Ga0059261_0621 at 662.302 kb on + strand, within Ga0059261_0621 at 662.303 kb on - strand, within Ga0059261_0621 at 662.303 kb on - strand, within Ga0059261_0621 at 662.303 kb on - strand, within Ga0059261_0621 at 662.303 kb on - strand, within Ga0059261_0621 at 662.533 kb on + strand at 662.533 kb on + strand at 662.533 kb on + strand at 662.533 kb on + strand at 662.534 kb on - strand at 662.585 kb on + strand, within Ga0059261_0622 at 662.585 kb on + strand, within Ga0059261_0622 at 662.679 kb on + strand, within Ga0059261_0622 at 662.680 kb on - strand, within Ga0059261_0622 at 662.809 kb on + strand, within Ga0059261_0622 at 662.810 kb on - strand, within Ga0059261_0622 at 662.810 kb on - strand, within Ga0059261_0622 at 662.810 kb on - strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.812 kb on + strand, within Ga0059261_0622 at 662.813 kb on - strand, within Ga0059261_0622 at 662.947 kb on + strand, within Ga0059261_0622 at 662.948 kb on - strand, within Ga0059261_0622 at 662.948 kb on - strand, within Ga0059261_0622 at 662.959 kb on + strand, within Ga0059261_0622 at 662.960 kb on - strand, within Ga0059261_0622 at 662.960 kb on - strand, within Ga0059261_0622 at 663.239 kb on + strand, within Ga0059261_0622 at 663.335 kb on + strand at 663.336 kb on - strand at 663.336 kb on - strand at 663.692 kb on + strand, within Ga0059261_0623 at 663.692 kb on + strand, within Ga0059261_0623 at 663.693 kb on - strand, within Ga0059261_0623 at 663.970 kb on + strand, within Ga0059261_0623 at 663.970 kb on + strand, within Ga0059261_0623 at 663.971 kb on - strand, within Ga0059261_0623 at 664.147 kb on + strand, within Ga0059261_0623 at 664.148 kb on - strand, within Ga0059261_0623
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.001 vol% remove 661,486 + Ga0059261_0620 0.82 -0.1 661,486 + Ga0059261_0620 0.82 -1.3 661,486 + Ga0059261_0620 0.82 -1.5 661,486 + Ga0059261_0620 0.82 -1.1 661,486 + Ga0059261_0620 0.82 -1.8 661,486 + Ga0059261_0620 0.82 -1.2 661,487 - Ga0059261_0620 0.82 -0.0 661,487 - Ga0059261_0620 0.82 -0.7 661,487 - Ga0059261_0620 0.82 -0.4 661,526 + Ga0059261_0620 0.84 -0.5 661,526 + Ga0059261_0620 0.84 -0.8 661,526 + Ga0059261_0620 0.84 -0.6 661,526 + Ga0059261_0620 0.84 -1.3 661,526 + Ga0059261_0620 0.84 -1.1 661,526 + Ga0059261_0620 0.84 -0.8 661,527 - Ga0059261_0620 0.84 -0.9 661,527 - Ga0059261_0620 0.84 -0.0 661,532 + Ga0059261_0620 0.85 +0.4 661,532 + Ga0059261_0620 0.85 -2.0 661,532 + Ga0059261_0620 0.85 -0.5 661,532 + Ga0059261_0620 0.85 -0.3 661,533 - Ga0059261_0620 0.85 -1.3 661,666 + -0.4 661,666 + -1.0 661,667 - -1.3 661,667 - -0.3 661,667 - -1.8 661,667 - -0.6 661,701 + -0.3 661,710 + -0.0 661,710 + -0.8 661,710 + -0.2 661,711 - -0.7 661,720 + +0.3 661,720 + +0.4 661,720 + -0.7 661,720 + -2.7 661,721 - +1.3 661,754 - -1.0 661,755 + -0.7 661,795 + +0.4 661,795 + +0.1 662,255 - Ga0059261_0621 0.62 +0.7 662,255 - Ga0059261_0621 0.62 -0.3 662,255 - Ga0059261_0621 0.62 +1.5 662,296 + Ga0059261_0621 0.68 -0.4 662,296 + Ga0059261_0621 0.68 +0.5 662,297 - Ga0059261_0621 0.69 -0.5 662,302 + +1.3 662,302 + Ga0059261_0621 0.69 +0.3 662,302 + Ga0059261_0621 0.69 -0.3 662,303 - Ga0059261_0621 0.70 +0.4 662,303 - Ga0059261_0621 0.70 +0.3 662,303 - Ga0059261_0621 0.70 -0.1 662,303 - Ga0059261_0621 0.70 -0.8 662,533 + -0.1 662,533 + -0.7 662,533 + +0.0 662,533 + -0.1 662,534 - +0.2 662,585 + Ga0059261_0622 0.12 +0.4 662,585 + Ga0059261_0622 0.12 -0.8 662,679 + Ga0059261_0622 0.23 +0.2 662,680 - Ga0059261_0622 0.23 +0.5 662,809 + Ga0059261_0622 0.39 -1.0 662,810 - Ga0059261_0622 0.39 -0.7 662,810 - Ga0059261_0622 0.39 -1.2 662,810 - Ga0059261_0622 0.39 -0.3 662,812 + Ga0059261_0622 0.39 -1.4 662,812 + Ga0059261_0622 0.39 -0.8 662,812 + Ga0059261_0622 0.39 -1.0 662,812 + Ga0059261_0622 0.39 +0.0 662,812 + Ga0059261_0622 0.39 -0.5 662,813 - Ga0059261_0622 0.39 -0.6 662,947 + Ga0059261_0622 0.55 -1.0 662,948 - Ga0059261_0622 0.55 -0.3 662,948 - Ga0059261_0622 0.55 +0.9 662,959 + Ga0059261_0622 0.57 -1.1 662,960 - Ga0059261_0622 0.57 -0.2 662,960 - Ga0059261_0622 0.57 -2.3 663,239 + Ga0059261_0622 0.90 -0.6 663,335 + +0.1 663,336 - -2.1 663,336 - -1.0 663,692 + Ga0059261_0623 0.32 -0.5 663,692 + Ga0059261_0623 0.32 -0.3 663,693 - Ga0059261_0623 0.32 -1.7 663,970 + Ga0059261_0623 0.60 -0.3 663,970 + Ga0059261_0623 0.60 -1.3 663,971 - Ga0059261_0623 0.60 -0.3 664,147 + Ga0059261_0623 0.78 -0.2 664,148 - Ga0059261_0623 0.78 -0.7
Or see this region's nucleotide sequence