Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28610
Experiment: Rifampicin 0.0016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Rifampicin 0.0016 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 6,648,906 | + | AO356_28605 | 0.20 | -0.1 | |
| 6,648,907 | - | AO356_28605 | 0.20 | +1.0 | |
| 6,648,907 | - | AO356_28605 | 0.20 | +0.4 | |
| 6,649,201 | + | AO356_28605 | 0.47 | -0.2 | |
| 6,649,428 | + | AO356_28605 | 0.68 | +0.3 | |
| 6,649,548 | - | AO356_28605 | 0.79 | +0.0 | |
| 6,649,554 | + | AO356_28605 | 0.79 | +0.2 | |
| 6,649,554 | + | AO356_28605 | 0.79 | -0.2 | |
| 6,649,555 | - | AO356_28605 | 0.80 | -0.4 | |
| 6,649,555 | - | AO356_28605 | 0.80 | +0.8 | |
| 6,649,913 | + | +1.2 | |||
| 6,649,914 | - | +0.2 | |||
| 6,650,385 | - | AO356_28610 | 0.67 | -0.9 | |
| 6,650,385 | - | AO356_28610 | 0.67 | -0.6 | |
| 6,650,925 | + | AO356_28615 | 0.18 | +0.5 | |
| 6,650,926 | - | AO356_28615 | 0.18 | +0.7 | |
| 6,651,002 | + | AO356_28615 | 0.25 | +0.8 | |
| 6,651,003 | - | AO356_28615 | 0.25 | -0.1 | |
| 6,651,283 | - | AO356_28615 | 0.53 | -0.0 | |
| 6,651,359 | + | AO356_28615 | 0.60 | -0.2 | |
| 6,651,360 | - | AO356_28615 | 0.61 | +0.3 | |
| 6,651,531 | + | AO356_28615 | 0.77 | -0.8 |
Or see this region's nucleotide sequence