Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16230

Experiment: Rifampicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0016 mg/ml
3,667,352	+				+0.7
3,667,391	+				+0.6
3,667,391	+				+0.9
3,667,392	-				-0.2
3,667,411	+				+0.3
3,667,414	+				+1.3
3,667,415	-				+0.6
3,667,428	+				+0.5
3,667,429	-				-0.9
3,667,429	-				-0.1
3,667,447	+				+0.3
3,667,447	+				+0.6
3,667,447	+				+0.7
3,667,447	+				-0.5
3,667,447	+				-1.7
3,667,448	-				+0.4
3,667,448	-				-0.8
3,667,453	-				-0.5
3,667,463	+				+0.8
3,667,463	+				-0.3
3,667,463	+				-1.3
3,667,464	-				-1.4
3,667,464	-				+0.5
3,667,482	+				+0.8
3,667,483	-				-1.5
3,667,506	+				-0.5
3,667,506	+				-0.2
3,667,506	+				+0.8
3,667,506	+				+0.3
3,667,506	+				+0.3
3,667,506	+				+0.0
3,667,507	-				-0.6
3,667,507	-				-1.8
3,667,507	-				+0.0
3,667,507	-				-0.6
3,667,507	-				-0.6
3,667,507	-				-0.3
3,667,627	+		AO356_16225	0.22	-0.5
3,667,627	+		AO356_16225	0.22	-1.0
3,667,627	+		AO356_16225	0.22	-0.6
3,667,627	+		AO356_16225	0.22	-1.2
3,667,627	+		AO356_16225	0.22	-1.4
3,667,627	+		AO356_16225	0.22	-1.9
3,667,627	+		AO356_16225	0.22	-1.3
3,667,627	+		AO356_16225	0.22	+0.3
3,667,628	-		AO356_16225	0.22	-0.8
3,667,628	-		AO356_16225	0.22	+0.2
3,667,628	-		AO356_16225	0.22	-2.8
3,667,628	-		AO356_16225	0.22	-0.9
3,667,646	+		AO356_16225	0.25	-0.1
3,667,647	-		AO356_16225	0.25	-0.1
3,667,647	-		AO356_16225	0.25	+0.5
3,667,647	-		AO356_16225	0.25	-0.7
3,667,688	+		AO356_16225	0.31	-0.8
3,667,688	+		AO356_16225	0.31	-1.0
3,667,688	+		AO356_16225	0.31	-1.9
3,667,688	+		AO356_16225	0.31	-1.7
3,667,688	+		AO356_16225	0.31	+0.5
3,667,688	+		AO356_16225	0.31	-2.3
3,667,688	+		AO356_16225	0.31	-1.3
3,667,688	+		AO356_16225	0.31	-1.1
3,667,688	+		AO356_16225	0.31	-0.5
3,667,688	+		AO356_16225	0.31	-1.7
3,667,688	+		AO356_16225	0.31	-0.9
3,667,688	+		AO356_16225	0.31	-1.3
3,667,688	+		AO356_16225	0.31	+0.7
3,667,688	+		AO356_16225	0.31	-0.9
3,667,689	-		AO356_16225	0.31	-0.7
3,667,689	-		AO356_16225	0.31	+0.1
3,667,689	-		AO356_16225	0.31	+0.3
3,667,689	-		AO356_16225	0.31	-0.8
3,667,690	+		AO356_16225	0.31	-0.7
3,667,690	+		AO356_16225	0.31	+1.7
3,667,690	+		AO356_16225	0.31	-1.1
3,667,690	+		AO356_16225	0.31	-0.1
3,667,690	+		AO356_16225	0.31	+0.1
3,667,690	+		AO356_16225	0.31	-0.5
3,667,690	+		AO356_16225	0.31	-0.4
3,667,690	+		AO356_16225	0.31	-0.7
3,667,690	+		AO356_16225	0.31	-0.3
3,667,690	+		AO356_16225	0.31	-0.8
3,667,691	-		AO356_16225	0.32	-0.1
3,667,691	-		AO356_16225	0.32	-0.5
3,667,691	-		AO356_16225	0.32	+1.3
3,667,691	-		AO356_16225	0.32	-1.0
3,667,691	-		AO356_16225	0.32	-0.7
3,667,691	-		AO356_16225	0.32	+0.4
3,667,691	-		AO356_16225	0.32	-0.9
3,667,899	+		AO356_16225	0.63	-0.2
3,667,900	-		AO356_16225	0.63	+1.1
3,667,903	+		AO356_16225	0.64	-2.1
3,667,903	+		AO356_16225	0.64	+0.4
3,667,904	-		AO356_16225	0.64	-1.1
3,667,919	-		AO356_16225	0.66	-1.3
3,667,919	-		AO356_16225	0.66	-0.0
3,667,927	+		AO356_16225	0.67	-1.3
3,667,927	+		AO356_16225	0.67	-0.6
3,667,927	+		AO356_16225	0.67	-2.4
3,667,927	+		AO356_16225	0.67	-0.6
3,667,927	+		AO356_16225	0.67	-1.4
3,667,928	-		AO356_16225	0.67	+0.2
3,667,928	-		AO356_16225	0.67	-1.0
3,667,928	-		AO356_16225	0.67	-1.0
3,667,928	-		AO356_16225	0.67	-0.9
3,667,928	-		AO356_16225	0.67	-1.1
3,667,937	+		AO356_16225	0.69	-0.5
3,667,937	+		AO356_16225	0.69	-0.5
3,667,937	+		AO356_16225	0.69	-1.9
3,667,937	+		AO356_16225	0.69	-0.5
3,667,937	+		AO356_16225	0.69	-0.7
3,667,938	-		AO356_16225	0.69	-1.0
3,667,938	-		AO356_16225	0.69	-1.5
3,667,938	-		AO356_16225	0.69	-1.1
3,667,938	-		AO356_16225	0.69	-2.0
3,667,938	-		AO356_16225	0.69	-0.2
3,667,938	-		AO356_16225	0.69	-0.3
3,667,964	-		AO356_16225	0.73	-1.9
3,667,964	-		AO356_16225	0.73	-0.9
3,667,964	-		AO356_16225	0.73	-0.1
3,668,021	+		AO356_16225	0.82	-0.6
3,668,021	+		AO356_16225	0.82	-0.5
3,668,022	-		AO356_16225	0.82	+0.9
3,668,022	-		AO356_16225	0.82	+0.6
3,668,022	-		AO356_16225	0.82	+2.1
3,668,162	-				-1.2
3,668,162	-				+0.6
3,668,300	+		AO356_16230	0.27	-1.4
3,668,300	+		AO356_16230	0.27	-0.5
3,668,300	+		AO356_16230	0.27	-1.2
3,668,300	+		AO356_16230	0.27	+0.1
3,668,300	+		AO356_16230	0.27	-0.9
3,668,301	-		AO356_16230	0.28	-0.4
3,668,301	-		AO356_16230	0.28	+0.4
3,668,301	-		AO356_16230	0.28	-2.2
3,668,301	-		AO356_16230	0.28	-1.0
3,668,301	-		AO356_16230	0.28	-0.9
3,668,302	+		AO356_16230	0.28	-0.1
3,668,303	-		AO356_16230	0.28	-1.1
3,668,314	+		AO356_16230	0.30	-0.6
3,668,314	+		AO356_16230	0.30	+0.8
3,668,315	-		AO356_16230	0.30	-1.5
3,668,315	-		AO356_16230	0.30	+0.5
3,668,315	-		AO356_16230	0.30	-1.4
3,668,315	-		AO356_16230	0.30	-1.0
3,668,315	-		AO356_16230	0.30	-0.9
3,668,411	-		AO356_16230	0.45	-0.8
3,668,438	-		AO356_16230	0.50	+0.0
3,668,478	+		AO356_16230	0.56	-2.9
3,668,479	-		AO356_16230	0.56	-2.0
3,668,479	-		AO356_16230	0.56	-1.4
3,668,530	+		AO356_16230	0.64	-1.9
3,668,530	+		AO356_16230	0.64	-0.3
3,668,530	+		AO356_16230	0.64	+1.0
3,668,530	+		AO356_16230	0.64	-1.3
3,668,530	+		AO356_16230	0.64	-0.5
3,668,530	+		AO356_16230	0.64	+0.0
3,668,530	+		AO356_16230	0.64	-0.6
3,668,530	+		AO356_16230	0.64	-0.3
3,668,530	+		AO356_16230	0.64	-0.6
3,668,530	+		AO356_16230	0.64	-1.1
3,668,530	+		AO356_16230	0.64	-1.2
3,668,530	+		AO356_16230	0.64	-1.6
3,668,531	-		AO356_16230	0.64	-0.5
3,668,531	-		AO356_16230	0.64	-1.0
3,668,531	-		AO356_16230	0.64	-0.6
3,668,531	-		AO356_16230	0.64	-1.0
3,668,531	-		AO356_16230	0.64	+1.1
3,668,531	-		AO356_16230	0.64	-1.1
3,668,531	-		AO356_16230	0.64	-1.4
3,668,531	-		AO356_16230	0.64	-0.6
3,668,531	-		AO356_16230	0.64	-0.4
3,668,531	-		AO356_16230	0.64	-0.8
3,668,531	-		AO356_16230	0.64	+0.2
3,668,531	-		AO356_16230	0.64	-1.3
3,668,531	-		AO356_16230	0.64	+0.1
3,668,534	+		AO356_16230	0.65	-0.9
3,668,534	+		AO356_16230	0.65	+0.1
3,668,535	-		AO356_16230	0.65	+0.0
3,668,535	-		AO356_16230	0.65	-1.5
3,668,575	+		AO356_16230	0.71	-0.9
3,668,575	+		AO356_16230	0.71	-0.1
3,668,575	+		AO356_16230	0.71	-1.7
3,668,575	+		AO356_16230	0.71	+0.5
3,668,575	+		AO356_16230	0.71	-1.3
3,668,576	-		AO356_16230	0.72	-0.1
3,668,576	-		AO356_16230	0.72	-0.9
3,668,576	-		AO356_16230	0.72	-0.1
3,668,576	-		AO356_16230	0.72	-0.3
3,668,576	-		AO356_16230	0.72	+0.8
3,668,577	+		AO356_16230	0.72	-0.3
3,668,577	+		AO356_16230	0.72	-0.9
3,668,577	+		AO356_16230	0.72	-1.1
3,668,577	+		AO356_16230	0.72	+0.3
3,668,577	+		AO356_16230	0.72	-1.2
3,668,577	+		AO356_16230	0.72	-0.6
3,668,577	+		AO356_16230	0.72	-0.5
3,668,578	-		AO356_16230	0.72	-0.5
3,668,578	-		AO356_16230	0.72	-0.2
3,668,578	-		AO356_16230	0.72	-0.0
3,668,578	-		AO356_16230	0.72	-0.1
3,668,667	+		AO356_16230	0.86	-1.5
3,668,667	+		AO356_16230	0.86	-0.8
3,668,668	-		AO356_16230	0.86	-0.1
3,668,668	-		AO356_16230	0.86	-0.1
3,668,695	-				-0.2
3,668,853	+				-1.2
3,668,853	+				-1.2
3,668,854	-				+0.3
3,668,854	-				+0.2
3,668,855	+				-0.7
3,668,856	-				-2.2
3,668,856	-				-0.8
3,668,856	-				-1.9
3,668,856	-				-1.3
3,668,856	-				-0.1
3,668,856	-				+0.7
3,668,931	+				-1.3
3,668,931	+				-0.5
3,668,931	+				-2.2
3,668,932	-				+0.5
3,668,932	-				+0.0
3,668,951	+				-1.8
3,669,037	-		AO356_16235	0.13	-1.8
3,669,122	+		AO356_16235	0.16	-0.8
3,669,123	-		AO356_16235	0.16	-1.3
3,669,126	+		AO356_16235	0.17	-1.1
3,669,126	+		AO356_16235	0.17	-0.5
3,669,126	+		AO356_16235	0.17	+0.3
3,669,126	+		AO356_16235	0.17	-1.2
3,669,126	+		AO356_16235	0.17	-0.2
3,669,126	+		AO356_16235	0.17	-0.4
3,669,126	+		AO356_16235	0.17	-0.5
3,669,126	+		AO356_16235	0.17	-0.2
3,669,126	+		AO356_16235	0.17	-1.0
3,669,126	+		AO356_16235	0.17	-2.1
3,669,126	+		AO356_16235	0.17	-0.6
3,669,127	-		AO356_16235	0.17	-0.5
3,669,127	-		AO356_16235	0.17	-0.3
3,669,127	-		AO356_16235	0.17	-0.6
3,669,127	-		AO356_16235	0.17	-0.2
3,669,127	-		AO356_16235	0.17	+0.4
3,669,127	-		AO356_16235	0.17	-1.4
3,669,127	-		AO356_16235	0.17	-1.3
3,669,127	-		AO356_16235	0.17	-0.5
3,669,127	-		AO356_16235	0.17	-1.3
3,669,276	+		AO356_16235	0.23	-0.6
3,669,276	+		AO356_16235	0.23	-0.3
3,669,277	-		AO356_16235	0.23	+0.1
3,669,277	-		AO356_16235	0.23	-0.0
3,669,309	+		AO356_16235	0.24	+0.3
3,669,309	+		AO356_16235	0.24	-1.7
3,669,310	-		AO356_16235	0.25	-0.4
3,669,366	+		AO356_16235	0.27	-1.0
3,669,366	+		AO356_16235	0.27	+0.9
3,669,366	+		AO356_16235	0.27	+0.1
3,669,367	-		AO356_16235	0.27	-0.5
3,669,367	-		AO356_16235	0.27	-1.9
3,669,384	-		AO356_16235	0.28	+0.6
3,669,384	-		AO356_16235	0.28	-0.9
3,669,648	+		AO356_16235	0.39	-1.1
3,669,648	+		AO356_16235	0.39	+0.9
3,669,648	+		AO356_16235	0.39	+0.1
3,669,648	+		AO356_16235	0.39	-0.4
3,669,648	+		AO356_16235	0.39	-2.9
3,669,649	-		AO356_16235	0.39	-0.3
3,669,649	-		AO356_16235	0.39	+0.6
3,669,649	-		AO356_16235	0.39	-0.6
3,669,649	-		AO356_16235	0.39	-3.2
3,669,649	-		AO356_16235	0.39	-0.1
3,669,649	-		AO356_16235	0.39	+0.3
3,669,649	-		AO356_16235	0.39	-1.5
3,669,747	+		AO356_16235	0.43	-0.9
3,669,747	+		AO356_16235	0.43	-1.3
3,669,747	+		AO356_16235	0.43	-2.7
3,669,747	+		AO356_16235	0.43	-1.4
3,669,747	+		AO356_16235	0.43	-0.0
3,669,748	-		AO356_16235	0.44	-0.5
3,669,748	-		AO356_16235	0.44	-0.8
3,669,748	-		AO356_16235	0.44	-1.0
3,669,748	-		AO356_16235	0.44	-1.0
3,669,748	-		AO356_16235	0.44	-1.6
3,669,748	-		AO356_16235	0.44	-0.8
3,669,748	-		AO356_16235	0.44	-1.3
3,669,748	-		AO356_16235	0.44	+0.6
3,669,751	+		AO356_16235	0.44	-0.1
3,669,752	-		AO356_16235	0.44	-1.4