Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11990

Experiment: Rifampicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0016 mg/ml
2,715,609	+		AO356_11985	0.22	+1.0
2,715,609	+		AO356_11985	0.22	+1.4
2,715,609	+		AO356_11985	0.22	-0.6
2,715,609	+		AO356_11985	0.22	-0.9
2,715,609	+		AO356_11985	0.22	+0.7
2,715,609	+		AO356_11985	0.22	+0.5
2,715,609	+		AO356_11985	0.22	-1.1
2,715,609	+		AO356_11985	0.22	+0.3
2,715,609	+		AO356_11985	0.22	-0.5
2,715,610	-		AO356_11985	0.22	-1.1
2,715,610	-		AO356_11985	0.22	+0.3
2,715,610	-		AO356_11985	0.22	-0.4
2,715,610	-		AO356_11985	0.22	-0.1
2,715,610	-		AO356_11985	0.22	-0.2
2,715,610	-		AO356_11985	0.22	-0.4
2,716,198	+		AO356_11985	0.90	+0.4
2,716,199	-		AO356_11985	0.90	-0.8
2,716,199	-		AO356_11985	0.90	-0.2
2,716,199	-		AO356_11985	0.90	+0.4
2,716,199	-		AO356_11985	0.90	-0.3
2,716,199	-		AO356_11985	0.90	+0.7
2,716,274	-				+1.7
2,716,288	+				+1.4
2,716,288	+				-0.2
2,716,288	+				+0.2
2,716,288	+				+0.7
2,716,289	-				-0.0
2,716,289	-				-0.3
2,716,289	-				+0.4
2,716,289	-				-1.3
2,716,289	-				+0.2
2,716,289	-				+0.1
2,716,289	-				+0.3
2,716,289	-				-1.0
2,716,289	-				+0.5
2,716,290	+				-0.1
2,716,290	+				-0.4
2,716,290	+				-1.7
2,716,290	+				-0.3
2,716,290	+				+1.7
2,716,290	+				-0.4
2,716,290	+				-0.1
2,716,290	+				+0.4
2,716,290	+				+0.7
2,716,290	+				+2.6
2,716,291	-				-0.2
2,716,291	-				+0.5
2,716,291	-				-0.6
2,716,291	-				-0.9
2,716,291	-				-2.0
2,716,291	-				-0.2
2,716,434	+				+0.3
2,716,435	-				+0.1
2,716,435	-				+2.0
2,716,435	-				-0.5
2,716,435	-				+0.1
2,716,513	+				-0.8
2,716,513	+				-1.6
2,716,513	+				+0.7
2,716,514	-				+0.1
2,716,514	-				+0.1
2,716,514	-				+1.5
2,716,525	+				-0.2
2,716,526	-				+0.8
2,716,546	+				+0.2
2,716,547	-				-0.5
2,716,803	+		AO356_11990	0.13	+0.3
2,716,803	+		AO356_11990	0.13	-0.4
2,716,803	+		AO356_11990	0.13	-2.9
2,716,804	-		AO356_11990	0.13	-0.7
2,716,804	-		AO356_11990	0.13	+0.8
2,716,804	-		AO356_11990	0.13	-0.3
2,716,804	-		AO356_11990	0.13	-0.2
2,716,804	-		AO356_11990	0.13	-0.8
2,716,825	+		AO356_11990	0.14	-0.2
2,716,825	+		AO356_11990	0.14	+0.8
2,716,826	-		AO356_11990	0.14	-0.8
2,716,841	-		AO356_11990	0.15	+0.3
2,716,841	-		AO356_11990	0.15	+0.6
2,716,862	-		AO356_11990	0.15	-0.9
2,716,895	+		AO356_11990	0.17	+0.9
2,716,896	-		AO356_11990	0.17	-0.9
2,716,896	-		AO356_11990	0.17	-1.0
2,716,903	+		AO356_11990	0.17	-0.5
2,716,904	-		AO356_11990	0.17	+0.1
2,716,996	+		AO356_11990	0.22	-1.4
2,716,996	+		AO356_11990	0.22	-0.3
2,717,225	-		AO356_11990	0.32	-0.1
2,717,522	-		AO356_11990	0.46	+1.1
2,717,522	-		AO356_11990	0.46	+1.2
2,717,572	+		AO356_11990	0.48	-0.8
2,717,572	+		AO356_11990	0.48	-0.7
2,717,572	+		AO356_11990	0.48	-1.7
2,717,572	+		AO356_11990	0.48	-1.0
2,717,572	+		AO356_11990	0.48	-0.4
2,717,572	+		AO356_11990	0.48	-0.5
2,717,572	+		AO356_11990	0.48	+0.2
2,717,573	-		AO356_11990	0.48	-0.3
2,717,573	-		AO356_11990	0.48	-0.7
2,717,573	-		AO356_11990	0.48	+0.7
2,717,573	-		AO356_11990	0.48	-0.6
2,717,642	-		AO356_11990	0.51	+0.1
2,717,642	-		AO356_11990	0.51	-1.9
2,717,707	+		AO356_11990	0.54	+0.2
2,717,740	+		AO356_11990	0.56	+0.4
2,717,740	+		AO356_11990	0.56	-0.9
2,717,741	-		AO356_11990	0.56	+0.9
2,717,802	-		AO356_11990	0.59	-0.5
2,717,854	+		AO356_11990	0.61	-0.6
2,717,855	-		AO356_11990	0.61	-1.7
2,717,855	-		AO356_11990	0.61	-1.6
2,717,855	-		AO356_11990	0.61	-0.1
2,717,855	-		AO356_11990	0.61	-0.9
2,717,855	-		AO356_11990	0.61	+0.5
2,717,941	+		AO356_11990	0.65	-0.1
2,717,942	-		AO356_11990	0.65	-0.4
2,717,942	-		AO356_11990	0.65	-0.6
2,717,942	-		AO356_11990	0.65	-0.9
2,717,942	-		AO356_11990	0.65	+0.1
2,718,013	+		AO356_11990	0.68	+0.3
2,718,013	+		AO356_11990	0.68	-1.4
2,718,013	+		AO356_11990	0.68	-1.3
2,718,013	+		AO356_11990	0.68	-0.9
2,718,014	-		AO356_11990	0.68	-1.3
2,718,014	-		AO356_11990	0.68	+0.6
2,718,014	-		AO356_11990	0.68	-1.2
2,718,051	+		AO356_11990	0.70	-1.6
2,718,051	+		AO356_11990	0.70	-2.2
2,718,051	+		AO356_11990	0.70	-1.4
2,718,051	+		AO356_11990	0.70	+0.1
2,718,051	+		AO356_11990	0.70	+0.2
2,718,051	+		AO356_11990	0.70	+1.0
2,718,051	+		AO356_11990	0.70	-2.4
2,718,051	+		AO356_11990	0.70	-0.5
2,718,051	+		AO356_11990	0.70	-0.4
2,718,051	+		AO356_11990	0.70	-1.0
2,718,051	+		AO356_11990	0.70	-0.0
2,718,052	-		AO356_11990	0.70	+0.4
2,718,052	-		AO356_11990	0.70	-0.5
2,718,052	-		AO356_11990	0.70	-1.3
2,718,052	-		AO356_11990	0.70	+0.9
2,718,052	-		AO356_11990	0.70	-1.2
2,718,073	+		AO356_11990	0.71	-0.1
2,718,074	-		AO356_11990	0.71	-1.1
2,718,173	-		AO356_11990	0.76	-0.7
2,718,173	-		AO356_11990	0.76	-0.9
2,718,181	+		AO356_11990	0.76	-2.1
2,718,181	+		AO356_11990	0.76	-0.5
2,718,181	+		AO356_11990	0.76	-0.1
2,718,181	+		AO356_11990	0.76	+0.5
2,718,181	+		AO356_11990	0.76	-0.8
2,718,181	+		AO356_11990	0.76	-1.6
2,718,181	+		AO356_11990	0.76	-1.6
2,718,181	+		AO356_11990	0.76	-1.8
2,718,181	+		AO356_11990	0.76	+1.5
2,718,181	+		AO356_11990	0.76	-2.0
2,718,181	+		AO356_11990	0.76	-1.6
2,718,181	+		AO356_11990	0.76	-0.1
2,718,181	+		AO356_11990	0.76	+0.1
2,718,182	-		AO356_11990	0.76	-0.7
2,718,182	-		AO356_11990	0.76	+0.9
2,718,182	-		AO356_11990	0.76	+1.0
2,718,575	+				-0.4
2,718,718	+				-0.2
2,718,718	+				+0.9
2,718,718	+				+0.0
2,718,718	+				+0.8
2,718,719	-				-0.7
2,718,719	-				+0.6
2,718,719	-				+0.1
2,718,719	-				+0.7
2,718,719	-				+0.1
2,718,719	-				-1.2
2,718,719	-				-0.1
2,718,719	-				+0.7
2,718,764	+				+0.5
2,718,850	-				-0.1
2,718,909	+				-0.0
2,718,909	+				+1.2
2,718,909	+				+0.1
2,718,909	+				+0.3
2,718,909	+				+0.1
2,718,909	+				+0.2
2,718,909	+				-0.3
2,718,909	+				-1.5
2,718,909	+				+0.4
2,718,910	-				+0.5
2,718,910	-				+1.0
2,718,910	-				+1.8
2,718,950	+				-0.0
2,718,950	+				+0.3
2,718,950	+				-0.4
2,718,950	+				+0.3
2,718,950	+				+1.6
2,718,951	-				+0.1
2,718,951	-				-0.8
2,718,951	-				+0.9
2,718,951	-				+0.2
2,719,030	+				+1.0
2,719,030	+				+0.5
2,719,030	+				+0.6
2,719,030	+				+0.2
2,719,031	-				-0.3
2,719,031	-				+0.6
2,719,031	-				-0.8
2,719,031	-				+0.9
2,719,069	+				-0.4
2,719,069	+				-0.6
2,719,069	+				-0.7
2,719,069	+				+0.6
2,719,069	+				-0.2
2,719,069	+				+0.4
2,719,069	+				-0.6
2,719,069	+				+0.1
2,719,069	+				+0.1
2,719,070	-				+0.2
2,719,070	-				-0.4
2,719,070	-				-0.1
2,719,070	-				-0.2
2,719,070	-				-0.1
2,719,070	-				+0.6
2,719,070	-				+0.2
2,719,070	-				-0.7
2,719,070	-				+0.6
2,719,089	+				-0.1
2,719,089	+				-1.0
2,719,089	+				-0.3
2,719,090	-				-0.6
2,719,090	-				-0.4
2,719,090	-				+0.2
2,719,134	-				+0.5
2,719,151	-				+0.2
2,719,151	-				-0.3
2,719,151	-				+0.2
2,719,408	+		AO356_11995	0.15	+0.5
2,719,408	+		AO356_11995	0.15	-0.0
2,719,408	+		AO356_11995	0.15	+0.1
2,719,409	-		AO356_11995	0.15	+0.0
2,719,409	-		AO356_11995	0.15	-0.3
2,719,409	-		AO356_11995	0.15	-0.1
2,719,409	-		AO356_11995	0.15	+0.4
2,719,547	+		AO356_11995	0.20	-1.0
2,719,547	+		AO356_11995	0.20	+1.0
2,719,548	-		AO356_11995	0.20	-0.7
2,719,548	-		AO356_11995	0.20	-0.0
2,719,548	-		AO356_11995	0.20	-0.1
2,719,548	-		AO356_11995	0.20	-0.1