Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10540

Experiment: Rifampicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0016 mg/ml
2,381,561	-		AO356_10535	0.14	+0.1
2,381,561	-		AO356_10535	0.14	-1.3
2,381,587	+		AO356_10535	0.17	-0.7
2,381,587	+		AO356_10535	0.17	+0.1
2,381,587	+		AO356_10535	0.17	-0.7
2,381,587	+		AO356_10535	0.17	-0.0
2,381,587	+		AO356_10535	0.17	+0.8
2,381,588	-		AO356_10535	0.17	-0.4
2,381,588	-		AO356_10535	0.17	+0.1
2,381,588	-		AO356_10535	0.17	+0.5
2,381,588	-		AO356_10535	0.17	-0.3
2,381,749	+		AO356_10535	0.35	+0.3
2,381,750	-		AO356_10535	0.36	+0.5
2,381,800	+		AO356_10535	0.41	-0.2
2,381,801	-		AO356_10535	0.41	+0.5
2,381,801	-		AO356_10535	0.41	+0.7
2,381,801	-		AO356_10535	0.41	-0.2
2,381,801	-		AO356_10535	0.41	+1.2
2,381,801	-		AO356_10535	0.41	+0.2
2,382,009	+		AO356_10535	0.65	+0.9
2,382,009	+		AO356_10535	0.65	-0.7
2,382,009	+		AO356_10535	0.65	+0.3
2,382,009	+		AO356_10535	0.65	+0.5
2,382,009	+		AO356_10535	0.65	+0.5
2,382,009	+		AO356_10535	0.65	+0.1
2,382,010	-		AO356_10535	0.66	+1.0
2,382,010	-		AO356_10535	0.66	+0.0
2,382,010	-		AO356_10535	0.66	+0.2
2,382,010	-		AO356_10535	0.66	+0.7
2,382,010	-		AO356_10535	0.66	+0.4
2,382,010	-		AO356_10535	0.66	+0.3
2,382,010	-		AO356_10535	0.66	+0.8
2,382,013	+		AO356_10535	0.66	-0.4
2,382,013	+		AO356_10535	0.66	+0.4
2,382,014	-		AO356_10535	0.66	+0.1
2,382,082	+		AO356_10535	0.74	+0.4
2,382,083	-		AO356_10535	0.74	+0.8
2,382,083	-		AO356_10535	0.74	+0.9
2,382,137	-		AO356_10535	0.80	-0.6
2,382,277	+				+0.2
2,382,278	-				+0.5
2,382,297	+				-0.0
2,382,322	-				+0.3
2,382,322	-				+0.8
2,382,322	-				-0.3
2,382,324	+				+0.5
2,382,324	+				+0.3
2,382,324	+				+0.2
2,382,324	+				+0.6
2,382,325	-				-0.8
2,382,325	-				+0.8
2,382,325	-				-0.5
2,382,325	-				-0.5
2,382,325	-				-0.1
2,382,331	+				+1.1
2,382,453	+		AO356_10540	0.15	-0.3
2,382,454	-		AO356_10540	0.16	+0.3
2,382,771	+		AO356_10540	0.52	-0.0
2,382,771	+		AO356_10540	0.52	+0.2
2,382,771	+		AO356_10540	0.52	-2.8
2,382,772	-		AO356_10540	0.52	+0.0
2,382,772	-		AO356_10540	0.52	-0.9
2,382,772	-		AO356_10540	0.52	+0.1
2,382,772	-		AO356_10540	0.52	-0.1
2,383,223	+				+0.9
2,383,224	-				-0.8
2,383,224	-				-0.2
2,383,385	+		AO356_10545	0.19	+0.1
2,383,385	+		AO356_10545	0.19	-0.0
2,383,385	+		AO356_10545	0.19	-0.2
2,383,385	+		AO356_10545	0.19	+0.0
2,383,385	+		AO356_10545	0.19	-0.4
2,383,385	+		AO356_10545	0.19	-0.4
2,383,386	-		AO356_10545	0.19	-0.2
2,383,386	-		AO356_10545	0.19	-0.4
2,383,460	+		AO356_10545	0.27	+0.3
2,383,460	+		AO356_10545	0.27	+0.9
2,383,460	+		AO356_10545	0.27	-0.1
2,383,461	-		AO356_10545	0.27	+0.7
2,383,461	-		AO356_10545	0.27	-0.0
2,383,461	-		AO356_10545	0.27	-0.3
2,383,535	+		AO356_10545	0.34	-0.5
2,383,535	+		AO356_10545	0.34	+1.8
2,383,535	+		AO356_10545	0.34	+0.2
2,383,535	+		AO356_10545	0.34	+0.6
2,383,536	-		AO356_10545	0.34	-0.1
2,383,536	-		AO356_10545	0.34	-0.7
2,383,536	-		AO356_10545	0.34	+0.7
2,383,536	-				+2.3
2,383,546	+		AO356_10545	0.35	+1.3
2,383,546	+		AO356_10545	0.35	-0.3
2,383,547	-		AO356_10545	0.35	-0.7
2,383,547	-		AO356_10545	0.35	+0.1
2,383,673	+		AO356_10545	0.47	-0.1
2,383,673	+		AO356_10545	0.47	-0.3
2,383,673	+		AO356_10545	0.47	+0.6
2,383,673	+		AO356_10545	0.47	+0.0
2,383,673	+		AO356_10545	0.47	+0.8
2,383,674	-		AO356_10545	0.48	+0.5
2,383,674	-		AO356_10545	0.48	-0.7
2,383,674	-		AO356_10545	0.48	-0.6
2,383,674	-		AO356_10545	0.48	+0.7
2,383,725	-		AO356_10545	0.53	+1.5
2,383,725	-		AO356_10545	0.53	+0.1
2,383,832	+		AO356_10545	0.63	-0.8
2,383,832	+		AO356_10545	0.63	-1.4
2,383,832	+		AO356_10545	0.63	-0.1
2,383,833	-		AO356_10545	0.63	+0.5
2,383,833	-		AO356_10545	0.63	-0.8
2,383,833	-		AO356_10545	0.63	-0.7
2,383,833	-		AO356_10545	0.63	-1.1
2,383,833	-		AO356_10545	0.63	-0.4
2,383,835	+		AO356_10545	0.63	-0.0
2,383,835	+		AO356_10545	0.63	-1.0
2,383,835	+		AO356_10545	0.63	+0.1
2,384,072	+		AO356_10545	0.86	+1.6
2,384,073	-		AO356_10545	0.86	+1.3