Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_08975

Experiment: Rifampicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0016 mg/ml
2,027,799	+		AO356_08970	0.45	+0.7
2,027,799	+		AO356_08970	0.45	+1.4
2,027,799	+		AO356_08970	0.45	+0.3
2,027,800	-		AO356_08970	0.45	-0.2
2,027,800	-		AO356_08970	0.45	+0.2
2,027,800	-		AO356_08970	0.45	+0.6
2,027,800	-		AO356_08970	0.45	+0.3
2,027,800	-		AO356_08970	0.45	+0.3
2,027,800	-		AO356_08970	0.45	+1.0
2,027,800	-		AO356_08970	0.45	-0.1
2,027,871	+		AO356_08970	0.50	+0.8
2,027,872	-		AO356_08970	0.50	-0.8
2,027,902	-		AO356_08970	0.52	-0.1
2,027,976	+		AO356_08970	0.58	-1.4
2,027,976	+		AO356_08970	0.58	-0.1
2,027,976	+		AO356_08970	0.58	+0.2
2,027,976	+		AO356_08970	0.58	+0.3
2,027,977	-		AO356_08970	0.58	+0.2
2,028,348	+		AO356_08970	0.84	+0.1
2,028,348	+		AO356_08970	0.84	-0.4
2,028,348	+		AO356_08970	0.84	-0.3
2,028,348	+		AO356_08970	0.84	-0.7
2,028,349	-		AO356_08970	0.84	+0.1
2,028,389	+		AO356_08970	0.87	+0.2
2,028,390	-		AO356_08970	0.87	+0.5
2,028,436	-				-0.3
2,028,436	-				+0.5
2,028,621	-				-3.1
2,028,629	+				-0.4
2,028,630	-				-1.4
2,028,631	+				+0.3
2,028,631	+				+0.5
2,028,631	+				+0.4
2,028,632	-				-0.2
2,028,632	-				+0.1
2,028,632	-				+0.2
2,028,792	+				+0.6
2,028,792	+				+0.2
2,028,827	-				-0.4
2,028,857	-				-2.0
2,028,857	-				-0.7
2,028,915	+				+0.2
2,028,915	+				-1.9
2,028,945	-				-2.6
2,028,975	-				+0.3
2,029,088	+		AO356_08975	0.13	-0.8
2,029,088	+		AO356_08975	0.13	-1.5
2,029,088	+		AO356_08975	0.13	-2.1
2,029,089	-		AO356_08975	0.13	-1.6
2,029,291	-		AO356_08975	0.20	+0.2
2,029,307	+		AO356_08975	0.21	+0.1
2,029,370	+		AO356_08975	0.23	-1.7
2,029,370	+		AO356_08975	0.23	-3.2
2,029,371	-		AO356_08975	0.23	+0.7
2,029,371	-		AO356_08975	0.23	-1.9
2,029,371	-		AO356_08975	0.23	-1.0
2,029,371	-		AO356_08975	0.23	-0.2
2,029,371	-		AO356_08975	0.23	+0.4
2,029,390	+		AO356_08975	0.24	-2.4
2,029,390	+		AO356_08975	0.24	-0.5
2,029,434	-		AO356_08975	0.25	+0.7
2,029,434	-		AO356_08975	0.25	-3.1
2,029,434	-		AO356_08975	0.25	-1.1
2,029,454	+		AO356_08975	0.26	-0.1
2,029,454	+		AO356_08975	0.26	+1.1
2,029,455	-		AO356_08975	0.26	+0.4
2,029,455	-		AO356_08975	0.26	-1.4
2,029,496	+		AO356_08975	0.28	-1.0
2,029,497	-		AO356_08975	0.28	-0.9
2,029,497	-		AO356_08975	0.28	-2.8
2,029,497	-		AO356_08975	0.28	-1.9
2,029,497	-		AO356_08975	0.28	-1.5
2,029,850	+		AO356_08975	0.41	-2.1
2,029,850	+		AO356_08975	0.41	-0.1
2,029,850	+		AO356_08975	0.41	-0.6
2,029,851	-		AO356_08975	0.41	-1.6
2,029,851	-		AO356_08975	0.41	-2.8
2,029,883	+		AO356_08975	0.42	+0.4
2,030,033	+		AO356_08975	0.48	-0.3
2,030,063	+		AO356_08975	0.49	-1.3
2,030,064	-		AO356_08975	0.49	+0.8
2,030,090	+		AO356_08975	0.50	-0.2
2,030,090	+		AO356_08975	0.50	-0.8
2,030,090	+		AO356_08975	0.50	-0.3
2,030,090	+		AO356_08975	0.50	-2.6
2,030,090	+		AO356_08975	0.50	-0.7
2,030,091	-		AO356_08975	0.50	-1.2
2,030,102	+		AO356_08975	0.50	-0.6
2,030,102	+		AO356_08975	0.50	+0.3
2,030,102	+		AO356_08975	0.50	-0.1
2,030,103	-		AO356_08975	0.50	-2.9
2,030,103	-		AO356_08975	0.50	-0.5
2,030,103	-		AO356_08975	0.50	+0.4
2,030,103	-		AO356_08975	0.50	-1.0
2,030,103	-		AO356_08975	0.50	-0.4
2,030,122	+		AO356_08975	0.51	-0.2
2,030,156	+		AO356_08975	0.52	+0.6
2,030,157	-		AO356_08975	0.52	-0.6
2,030,657	+		AO356_08975	0.71	-1.9
2,030,658	-		AO356_08975	0.71	-0.2
2,030,720	+		AO356_08975	0.73	+0.7
2,030,720	+		AO356_08975	0.73	-0.5
2,030,721	-		AO356_08975	0.73	+0.2
2,030,721	-		AO356_08975	0.73	-1.1
2,031,146	+		AO356_08975	0.89	-0.9
2,031,161	+		AO356_08975	0.90	+1.5
2,031,161	+		AO356_08975	0.90	-0.4
2,031,162	-		AO356_08975	0.90	-0.2
2,031,162	-		AO356_08975	0.90	-0.6
2,031,162	-		AO356_08975	0.90	+0.4
2,031,162	-		AO356_08975	0.90	+0.3
2,031,451	+				+0.6
2,031,452	-				-0.5
2,031,452	-				+0.4
2,031,454	-				-0.7
2,031,454	-				+0.7
2,031,454	-				-0.4
2,031,490	+				-0.7
2,031,491	-				+0.3
2,031,491	-				-0.4
2,031,525	+				+0.1
2,031,526	-				+1.2
2,031,556	+				+1.2
2,031,556	+				+0.2
2,031,557	-				+0.0
2,031,572	-				-0.0
2,031,762	-		AO356_08980	0.36	+0.1
2,031,791	+		AO356_08980	0.41	-1.3
2,031,791	+		AO356_08980	0.41	+0.2
2,031,791	+		AO356_08980	0.41	-0.1
2,031,792	-		AO356_08980	0.41	-1.6
2,031,792	-		AO356_08980	0.41	+0.8
2,031,845	+		AO356_08980	0.49	-1.0
2,031,846	-		AO356_08980	0.49	+0.3
2,031,866	+		AO356_08980	0.52	-0.4
2,031,866	+		AO356_08980	0.52	+0.3
2,031,867	-		AO356_08980	0.52	+0.4
2,031,867	-		AO356_08980	0.52	+0.3
2,031,962	+		AO356_08980	0.67	+0.5
2,031,962	+		AO356_08980	0.67	+1.0
2,031,962	+		AO356_08980	0.67	+0.0
2,031,962	+		AO356_08980	0.67	+0.2
2,031,962	+		AO356_08980	0.67	-0.6
2,031,962	+		AO356_08980	0.67	-0.0
2,031,963	-		AO356_08980	0.67	-0.3
2,031,963	-		AO356_08980	0.67	+1.0
2,031,963	-		AO356_08980	0.67	+0.7
2,031,963	-		AO356_08980	0.67	-0.5
2,031,963	-		AO356_08980	0.67	+0.1
2,031,963	-		AO356_08980	0.67	-0.3
2,032,082	+		AO356_08980	0.86	-0.1
2,032,097	+		AO356_08980	0.88	+0.1
2,032,097	+		AO356_08980	0.88	+0.8
2,032,097	+		AO356_08980	0.88	+0.8
2,032,097	+		AO356_08980	0.88	-0.8
2,032,098	-		AO356_08980	0.88	+0.3
2,032,098	-		AO356_08980	0.88	-0.3
2,032,109	+		AO356_08980	0.90	+0.4
2,032,110	-				+0.1
2,032,110	-				+0.5
2,032,110	-				-0.1
2,032,110	-				-1.4
2,032,179	+				-0.4
2,032,179	+				-0.6
2,032,179	+				-1.8
2,032,179	+				+1.1
2,032,179	+				-1.3
2,032,179	+				-0.7
2,032,180	-				+0.2
2,032,257	+		AO356_08985	0.39	+0.3