Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_08890

Experiment: Rifampicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0016 mg/ml
2,002,916	+				+0.6
2,002,917	-				+0.4
2,002,957	+				+1.1
2,002,958	-				-1.9
2,002,984	-				+0.0
2,003,019	+				+0.1
2,003,019	+				+0.6
2,003,019	+				+0.5
2,003,020	-				-0.2
2,003,020	-				-0.4
2,003,020	-				+0.1
2,003,020	-				+0.9
2,003,020	-				+0.4
2,003,020	-				-1.4
2,003,020	-				+0.6
2,003,026	+				+0.8
2,003,026	+				+0.8
2,003,027	-				-0.9
2,003,027	-				+0.0
2,003,038	+				+1.8
2,003,039	-				-1.1
2,003,200	-		AO356_08885	0.24	-0.2
2,003,256	+		AO356_08885	0.32	+1.5
2,003,373	+		AO356_08885	0.47	+0.4
2,003,373	+		AO356_08885	0.47	-0.7
2,003,373	+		AO356_08885	0.47	+0.6
2,003,373	+		AO356_08885	0.47	+0.4
2,003,374	-		AO356_08885	0.47	-0.6
2,003,374	-		AO356_08885	0.47	+0.0
2,003,384	+		AO356_08885	0.48	+1.0
2,003,384	+		AO356_08885	0.48	+0.5
2,003,384	+		AO356_08885	0.48	+1.3
2,003,384	+		AO356_08885	0.48	-0.1
2,003,384	+		AO356_08885	0.48	-0.2
2,003,384	+		AO356_08885	0.48	+1.2
2,003,385	-		AO356_08885	0.48	-0.4
2,003,385	-		AO356_08885	0.48	+0.2
2,003,397	+		AO356_08885	0.50	+1.4
2,003,398	-		AO356_08885	0.50	+0.4
2,003,398	-		AO356_08885	0.50	+0.4
2,003,403	+		AO356_08885	0.51	+0.5
2,003,403	+		AO356_08885	0.51	+0.1
2,003,403	+		AO356_08885	0.51	+0.0
2,003,403	+		AO356_08885	0.51	+0.9
2,003,403	+		AO356_08885	0.51	+1.4
2,003,403	+		AO356_08885	0.51	-0.1
2,003,403	+		AO356_08885	0.51	-1.1
2,003,403	+		AO356_08885	0.51	+1.0
2,003,403	+		AO356_08885	0.51	+0.4
2,003,403	+		AO356_08885	0.51	+0.4
2,003,403	+		AO356_08885	0.51	+0.4
2,003,403	+		AO356_08885	0.51	+0.8
2,003,403	+		AO356_08885	0.51	+0.6
2,003,403	+		AO356_08885	0.51	+1.0
2,003,403	+		AO356_08885	0.51	+1.0
2,003,403	+		AO356_08885	0.51	+0.4
2,003,403	+		AO356_08885	0.51	+1.1
2,003,404	-		AO356_08885	0.51	-0.0
2,003,404	-		AO356_08885	0.51	-0.4
2,003,404	-		AO356_08885	0.51	+1.0
2,003,404	-		AO356_08885	0.51	+0.2
2,003,404	-		AO356_08885	0.51	-0.1
2,003,404	-		AO356_08885	0.51	-0.2
2,003,404	-		AO356_08885	0.51	-0.3
2,003,404	-		AO356_08885	0.51	+0.4
2,003,404	-		AO356_08885	0.51	-0.2
2,003,404	-		AO356_08885	0.51	-2.3
2,003,404	-		AO356_08885	0.51	-1.9
2,003,404	-		AO356_08885	0.51	+0.2
2,003,404	-		AO356_08885	0.51	+0.5
2,003,404	-		AO356_08885	0.51	-0.9
2,003,404	-		AO356_08885	0.51	+0.9
2,003,404	-		AO356_08885	0.51	-0.7
2,003,404	-		AO356_08885	0.51	+0.3
2,003,404	-		AO356_08885	0.51	-0.2
2,003,481	+		AO356_08885	0.61	+0.6
2,003,481	+		AO356_08885	0.61	+0.3
2,003,482	-		AO356_08885	0.61	+0.4
2,003,514	+		AO356_08885	0.65	+0.6
2,003,514	+		AO356_08885	0.65	+1.5
2,003,514	+		AO356_08885	0.65	-0.0
2,003,514	+		AO356_08885	0.65	-0.9
2,003,514	+		AO356_08885	0.65	+2.4
2,003,514	+		AO356_08885	0.65	+1.4
2,003,514	+		AO356_08885	0.65	+1.6
2,003,514	+		AO356_08885	0.65	+0.4
2,003,514	+		AO356_08885	0.65	-0.1
2,003,514	+		AO356_08885	0.65	+1.2
2,003,514	+		AO356_08885	0.65	+0.6
2,003,514	+		AO356_08885	0.65	-0.1
2,003,515	-		AO356_08885	0.65	-1.0
2,003,515	-		AO356_08885	0.65	+0.9
2,003,515	-		AO356_08885	0.65	-1.4
2,003,515	-		AO356_08885	0.65	+0.9
2,003,515	-		AO356_08885	0.65	+0.0
2,003,515	-		AO356_08885	0.65	+0.6
2,003,515	-		AO356_08885	0.65	+1.2
2,003,536	-		AO356_08885	0.68	-1.1
2,003,536	-		AO356_08885	0.68	+0.3
2,003,741	+				-0.1
2,003,752	+				+1.1
2,003,785	+				+0.4
2,003,785	+				+1.4
2,003,792	+				+1.4
2,003,793	-				+1.6
2,003,834	-				-1.8
2,003,834	-				-0.6
2,004,049	+		AO356_08890	0.22	-1.7
2,004,049	+		AO356_08890	0.22	+1.2
2,004,050	-		AO356_08890	0.22	-1.1
2,004,062	+		AO356_08890	0.24	-1.6
2,004,062	+		AO356_08890	0.24	-1.4
2,004,063	-		AO356_08890	0.24	-1.6
2,004,063	-		AO356_08890	0.24	-2.5
2,004,063	-		AO356_08890	0.24	-0.3
2,004,063	-		AO356_08890	0.24	-2.3
2,004,063	-		AO356_08890	0.24	-0.5
2,004,223	+		AO356_08890	0.41	+0.6
2,004,223	+		AO356_08890	0.41	-0.8
2,004,303	-		AO356_08890	0.49	+0.6
2,004,304	+		AO356_08890	0.49	-1.7
2,004,304	+		AO356_08890	0.49	+0.6
2,004,304	+		AO356_08890	0.49	-1.3
2,004,304	+		AO356_08890	0.49	-0.8
2,004,304	+		AO356_08890	0.49	-2.3
2,004,304	+		AO356_08890	0.49	+0.7
2,004,305	-		AO356_08890	0.49	-2.6
2,004,305	-		AO356_08890	0.49	-1.5
2,004,305	-		AO356_08890	0.49	+0.2
2,004,305	-		AO356_08890	0.49	-0.4
2,004,305	-		AO356_08890	0.49	-0.9
2,004,385	+		AO356_08890	0.57	-0.9
2,004,403	-		AO356_08890	0.59	-0.4
2,004,485	-		AO356_08890	0.68	-1.3
2,004,508	+		AO356_08890	0.70	-0.8
2,004,509	-		AO356_08890	0.70	-1.5
2,004,509	-		AO356_08890	0.70	-1.7
2,004,523	+		AO356_08890	0.72	-0.2
2,004,523	+		AO356_08890	0.72	-0.2
2,004,524	-		AO356_08890	0.72	-1.1
2,004,524	-		AO356_08890	0.72	+0.2
2,004,524	-		AO356_08890	0.72	-0.0
2,004,524	-		AO356_08890	0.72	-0.3
2,004,532	+		AO356_08890	0.73	-0.3
2,004,618	+		AO356_08890	0.82	-1.4
2,004,632	-		AO356_08890	0.83	-1.5
2,004,639	+		AO356_08890	0.84	-0.9
2,004,639	+		AO356_08890	0.84	-0.9
2,004,639	+		AO356_08890	0.84	-0.4
2,004,640	-		AO356_08890	0.84	-0.2
2,004,640	-		AO356_08890	0.84	-0.6
2,004,662	-		AO356_08890	0.86	-1.8
2,004,736	+				-1.1
2,004,736	+				-0.9
2,004,737	-				-0.9
2,004,737	-				-1.1
2,004,737	-				+0.6
2,004,821	+				+0.2
2,004,822	-				-0.6
2,004,822	-				-0.2
2,004,822	-				+2.1
2,004,822	-				+0.5
2,004,822	-				-0.3
2,004,822	-				-0.4
2,004,822	-				+0.0
2,004,822	-				-1.4
2,004,825	+				+0.2
2,004,826	-				+0.4
2,004,826	-				-1.5
2,004,877	+				+0.7
2,004,877	+				+0.1
2,004,877	+				-2.2
2,004,878	-				-0.8
2,004,878	-				+0.4
2,004,937	+				-3.2
2,005,291	-				+0.9
2,005,687	+		AO356_08895	0.58	-1.8